RNA–Protein interactions for RNA: ENST00000476250.5

PGAP1-209, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 3

Gene PGAP1, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-209ENST00000476250 ZNF697Q5TEC3 545 aa10.99□□□□□ -0.65
PGAP1-209ENST00000476250 WDR70Q9NW82 654 aa10.99□□□□□ -0.65
PGAP1-209ENST00000476250 GRXCR2A6NFK2 248 aa10.98□□□□□ -0.65
PGAP1-209ENST00000476250 SPDYE16A6NNV3 312 aaPredicted RBP10.97□□□□□ -0.65
PGAP1-209ENST00000476250 AAASQ9NRG9 546 aa10.97□□□□□ -0.65
PGAP1-209ENST00000476250 PRIM1P49642 420 aaKnown RBP10.96□□□□□ -0.65
PGAP1-209ENST00000476250 INSM1Q01101 510 aaPredicted RBP10.96□□□□□ -0.65
PGAP1-209ENST00000476250 NUDT18Q6ZVK8 323 aa10.96□□□□□ -0.65
PGAP1-209ENST00000476250 EMID1Q96A84 441 aaPredicted RBP10.96□□□□□ -0.65
PGAP1-209ENST00000476250 SLC4A3P48751 1232 aa10.94□□□□□ -0.66
PGAP1-209ENST00000476250 SLF2Q8IX21 1173 aa10.94□□□□□ -0.66
PGAP1-209ENST00000476250 RBM27Q9P2N5 1060 aaKnown RBP10.93□□□□□ -0.66
PGAP1-209ENST00000476250 PCDHB3Q9Y5E6 796 aa10.93□□□□□ -0.66
PGAP1-209ENST00000476250 SWT1Q5T5J6 900 aaKnown RBP10.91□□□□□ -0.66
PGAP1-209ENST00000476250 ANKLE1Q8NAG6 615 aa10.91□□□□□ -0.66
PGAP1-209ENST00000476250 GDF9O60383 454 aa10.9□□□□□ -0.66
PGAP1-209ENST00000476250 PRR14Q9BWN1 585 aa10.9□□□□□ -0.66
PGAP1-209ENST00000476250 C11orf95C9JLR9 678 aaPredicted RBP10.89□□□□□ -0.67
PGAP1-209ENST00000476250 PPEF1O14829 653 aaPredicted RBP10.89□□□□□ -0.67
PGAP1-209ENST00000476250 LIAT1Q6ZQX7 453 aa10.89□□□□□ -0.67
PGAP1-209ENST00000476250 CDHR5Q9HBB8 845 aa10.89□□□□□ -0.67
PGAP1-209ENST00000476250 WIPF1O43516 503 aa10.87□□□□□ -0.67
PGAP1-209ENST00000476250 TLL1O43897 1013 aa10.87□□□□□ -0.67
PGAP1-209ENST00000476250 BLOC1S3Q6QNY0 202 aa10.87□□□□□ -0.67
PGAP1-209ENST00000476250 OSBPP22059 807 aa10.86□□□□□ -0.67
PGAP1-209ENST00000476250 ARIH1Q9Y4X5 557 aaPredicted RBP10.86□□□□□ -0.67
PGAP1-209ENST00000476250 S1PR4O95977 384 aa10.85□□□□□ -0.67
PGAP1-209ENST00000476250 LOC100996750A0A140TA64 210 aa10.84□□□□□ -0.67
PGAP1-209ENST00000476250 NFX1Q12986 1120 aaKnown RBP10.84□□□□□ -0.67
PGAP1-209ENST00000476250 TTC13Q8NBP0 860 aa10.84□□□□□ -0.67
PGAP1-209ENST00000476250 KRTAP4-6Q9BYQ5 205 aa10.84□□□□□ -0.67
PGAP1-209ENST00000476250 GMPR2Q9P2T1 348 aaKnown RBP10.84□□□□□ -0.67
PGAP1-209ENST00000476250 DACH1Q9UI36 760 aa10.84□□□□□ -0.67
PGAP1-209ENST00000476250 FOXC1Q12948 553 aa10.83□□□□□ -0.68
PGAP1-209ENST00000476250 AXIN1O15169 862 aa10.8□□□□□ -0.68
PGAP1-209ENST00000476250 PADI6Q6TGC4 694 aa10.79□□□□□ -0.68
PGAP1-209ENST00000476250 CRIPAKQ8N1N5 446 aa10.79□□□□□ -0.68
PGAP1-209ENST00000476250 TSHZ2Q9NRE2 1034 aa10.79□□□□□ -0.68
PGAP1-209ENST00000476250 FAM181BA6NEQ2 426 aa10.76□□□□□ -0.69
PGAP1-209ENST00000476250 EYA1Q99502 592 aa10.76□□□□□ -0.69
PGAP1-209ENST00000476250 LMOD2Q6P5Q4 547 aa10.75□□□□□ -0.69
PGAP1-209ENST00000476250 NPDC1Q9NQX5 325 aaPredicted RBP10.75□□□□□ -0.69
PGAP1-209ENST00000476250 PKD2L1Q9P0L9 805 aa10.74□□□□□ -0.69
PGAP1-209ENST00000476250 MLLT3P42568 568 aaPredicted RBP10.73□□□□□ -0.69
PGAP1-209ENST00000476250 ADH1BP00325 375 aa10.72□□□□□ -0.69
PGAP1-209ENST00000476250 CTC1Q2NKJ3 1217 aa10.72□□□□□ -0.69
PGAP1-209ENST00000476250 PLA2G2CQ5R387 149 aa10.72□□□□□ -0.69
PGAP1-209ENST00000476250 AVPP01185 164 aa10.71□□□□□ -0.69
PGAP1-209ENST00000476250 KMT5BQ4FZB7 885 aa10.71□□□□□ -0.69
PGAP1-209ENST00000476250 CYP4X1Q8N118 509 aa10.71□□□□□ -0.69
PGAP1-209ENST00000476250 SLC6A16Q9GZN6 736 aa10.71□□□□□ -0.69
PGAP1-209ENST00000476250 KCNV2Q8TDN2 545 aa10.7□□□□□ -0.7
PGAP1-209ENST00000476250 TERTO14746 1132 aaKnown RBP10.69□□□□□ -0.7
PGAP1-209ENST00000476250 ACTN4O43707 911 aaKnown RBP10.69□□□□□ -0.7
PGAP1-209ENST00000476250 ARHGEF1Q92888 912 aaKnown RBP10.68□□□□□ -0.7
PGAP1-209ENST00000476250 NR1I2O75469 434 aa10.66□□□□□ -0.7
PGAP1-209ENST00000476250 DNAJB2P25686 324 aa10.66□□□□□ -0.7
PGAP1-209ENST00000476250 TOR4AQ9NXH8 423 aa10.66□□□□□ -0.7
PGAP1-209ENST00000476250 LCE2CQ5TA81 110 aa10.65□□□□□ -0.7
PGAP1-209ENST00000476250 SMCPP49901 116 aaPredicted RBP10.64□□□□□ -0.71
PGAP1-209ENST00000476250 CFHP08603 1231 aa10.63□□□□□ -0.71
PGAP1-209ENST00000476250 TMEM134Q9H6X4 195 aa10.63□□□□□ -0.71
PGAP1-209ENST00000476250 TTC24A2A3L6 582 aaPredicted RBP10.62□□□□□ -0.71
PGAP1-209ENST00000476250 SNRPBP14678 240 aaKnown RBP10.62□□□□□ -0.71
PGAP1-209ENST00000476250 NUTM2FA1L443 756 aa10.61□□□□□ -0.71
PGAP1-209ENST00000476250 CD2BP2O95400 341 aaKnown RBP10.61□□□□□ -0.71
PGAP1-209ENST00000476250 FAM161AQ3B820 660 aa10.61□□□□□ -0.71
PGAP1-209ENST00000476250 RPIAP49247 311 aa10.6□□□□□ -0.71
PGAP1-209ENST00000476250 PTGDRQ13258 359 aa10.6□□□□□ -0.71
PGAP1-209ENST00000476250 ATP13A2Q9NQ11 1180 aa10.6□□□□□ -0.71
PGAP1-209ENST00000476250 SENP2Q9HC62 589 aa10.59□□□□□ -0.71
PGAP1-209ENST00000476250 SUZ12Q15022 739 aaKnown RBP10.58□□□□□ -0.72
PGAP1-209ENST00000476250 RBM46Q8TBY0 533 aaKnown RBP10.58□□□□□ -0.72
PGAP1-209ENST00000476250 SLC16A10Q8TF71 515 aa10.58□□□□□ -0.72
PGAP1-209ENST00000476250 ZSCAN1Q8NBB4 408 aa10.57□□□□□ -0.72
PGAP1-209ENST00000476250 TRIM47Q96LD4 638 aa10.57□□□□□ -0.72
PGAP1-209ENST00000476250 SEMA3EO15041 775 aa10.56□□□□□ -0.72
PGAP1-209ENST00000476250 SCUBE3Q8IX30 993 aa10.56□□□□□ -0.72
PGAP1-209ENST00000476250 SPSB2Q99619 263 aa10.55□□□□□ -0.72
PGAP1-209ENST00000476250 ADGRG1Q9Y653 693 aa10.55□□□□□ -0.72
PGAP1-209ENST00000476250 SLC10A3P09131 477 aa10.54□□□□□ -0.72
PGAP1-209ENST00000476250 RCCD1A6NED2 376 aa10.53□□□□□ -0.72
PGAP1-209ENST00000476250 FCF1Q9Y324 198 aaKnown RBP10.53□□□□□ -0.72
PGAP1-209ENST00000476250 KIFC2Q96AC6 838 aa10.52□□□□□ -0.73
PGAP1-209ENST00000476250 P3H3Q8IVL6 736 aa10.51□□□□□ -0.73
PGAP1-209ENST00000476250 FCHSD2O94868 740 aa10.49□□□□□ -0.73
PGAP1-209ENST00000476250 GMPRP36959 345 aa10.49□□□□□ -0.73
PGAP1-209ENST00000476250 PUS10Q3MIT2 529 aaKnown RBP10.49□□□□□ -0.73
PGAP1-209ENST00000476250 ZBTB24O43167 697 aaPredicted RBP10.47□□□□□ -0.73
PGAP1-209ENST00000476250 SMPD1P17405 629 aa10.47□□□□□ -0.73
PGAP1-209ENST00000476250 SNIP1Q8TAD8 396 aaKnown RBP10.46□□□□□ -0.73
PGAP1-209ENST00000476250 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.45□□□□□ -0.74
PGAP1-209ENST00000476250 RBM26Q5T8P6 1007 aaKnown RBP10.45□□□□□ -0.74
PGAP1-209ENST00000476250 IRF7Q92985 503 aa10.45□□□□□ -0.74
PGAP1-209ENST00000476250 NXF1Q9UBU9 619 aaKnown RBP10.45□□□□□ -0.74
PGAP1-209ENST00000476250 LORP23490 312 aaPredicted RBP10.42□□□□□ -0.74
PGAP1-209ENST00000476250 RSPH4AQ5TD94 716 aa10.42□□□□□ -0.74
PGAP1-209ENST00000476250 J3QL48 77 aa10.41□□□□□ -0.74
PGAP1-209ENST00000476250 WNT7AO00755 349 aa10.41□□□□□ -0.74
PGAP1-209ENST00000476250 PXYLP1Q8TE99 480 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms