RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 NUP155O75694 1391 aa12.82□□□□□ -0.36
SATB1-213ENST00000476178 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
SATB1-213ENST00000476178 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.82□□□□□ -0.36
SATB1-213ENST00000476178 ADGRB3O60242 1522 aa12.82□□□□□ -0.36
SATB1-213ENST00000476178 UNC13BO14795 1591 aa12.81□□□□□ -0.36
SATB1-213ENST00000476178 ALKQ9UM73 1620 aa12.81□□□□□ -0.36
SATB1-213ENST00000476178 KDM5AP29375 1690 aaKnown RBP12.81□□□□□ -0.36
SATB1-213ENST00000476178 RIMS2Q9UQ26 1411 aa12.8□□□□□ -0.36
SATB1-213ENST00000476178 MED1Q15648 1581 aaPredicted RBP12.8□□□□□ -0.36
SATB1-213ENST00000476178 TET3O43151 1660 aa12.8□□□□□ -0.36
SATB1-213ENST00000476178 C14orf37Q86TY3 774 aa12.79□□□□□ -0.36
SATB1-213ENST00000476178 TBX22Q9Y458 520 aa12.78□□□□□ -0.36
SATB1-213ENST00000476178 PLEKHG1Q9ULL1 1385 aa12.78□□□□□ -0.36
SATB1-213ENST00000476178 MSH6P52701 1360 aa12.77□□□□□ -0.37
SATB1-213ENST00000476178 IQGAP3Q86VI3 1631 aa12.77□□□□□ -0.37
SATB1-213ENST00000476178 SLAIN2Q9P270 581 aa12.76□□□□□ -0.37
SATB1-213ENST00000476178 ZFYVE9O95405 1425 aa12.76□□□□□ -0.37
SATB1-213ENST00000476178 FAM135BQ49AJ0 1406 aa12.76□□□□□ -0.37
SATB1-213ENST00000476178 GCC2Q8IWJ2 1684 aa12.76□□□□□ -0.37
SATB1-213ENST00000476178 E9PCH4 1651 aa12.75□□□□□ -0.37
SATB1-213ENST00000476178 ZNF326Q5BKZ1 582 aaKnown RBP12.75□□□□□ -0.37
SATB1-213ENST00000476178 XIRP1Q702N8 1843 aaKnown RBP12.74□□□□□ -0.37
SATB1-213ENST00000476178 NAIPQ13075 1403 aa12.74□□□□□ -0.37
SATB1-213ENST00000476178 TMEM131LA2VDJ0 1609 aa12.73□□□□□ -0.37
SATB1-213ENST00000476178 NKTRP30414 1462 aaKnown RBP12.73□□□□□ -0.37
SATB1-213ENST00000476178 MYO5BQ9ULV0 1848 aa12.73□□□□□ -0.37
SATB1-213ENST00000476178 TRIM52Q96A61 297 aa12.72□□□□□ -0.37
SATB1-213ENST00000476178 ATF3P18847 181 aa12.71□□□□□ -0.37
SATB1-213ENST00000476178 AMOTL2Q9Y2J4 779 aa12.71□□□□□ -0.37
SATB1-213ENST00000476178 C19orf44Q9H6X5 657 aa12.7□□□□□ -0.38
SATB1-213ENST00000476178 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
SATB1-213ENST00000476178 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
SATB1-213ENST00000476178 HFM1A2PYH4 1435 aa12.69□□□□□ -0.38
SATB1-213ENST00000476178 ADAMTS13Q76LX8 1427 aa12.69□□□□□ -0.38
SATB1-213ENST00000476178 ROBO1Q9Y6N7 1651 aa12.68□□□□□ -0.38
SATB1-213ENST00000476178 PIK3R4Q99570 1358 aa12.68□□□□□ -0.38
SATB1-213ENST00000476178 CHD2O14647 1828 aaKnown RBP12.67□□□□□ -0.38
SATB1-213ENST00000476178 RGS17Q9UGC6 210 aaPredicted RBP12.67□□□□□ -0.38
SATB1-213ENST00000476178 NCOA3Q9Y6Q9 1424 aa12.67□□□□□ -0.38
SATB1-213ENST00000476178 DIP2AQ14689 1571 aa12.64□□□□□ -0.39
SATB1-213ENST00000476178 TRPM2O94759 1503 aa12.64□□□□□ -0.39
SATB1-213ENST00000476178 SLC4A1APQ9BWU0 796 aaKnown RBP12.64□□□□□ -0.39
SATB1-213ENST00000476178 JCADQ9P266 1359 aa12.64□□□□□ -0.39
SATB1-213ENST00000476178 MEX3CQ5U5Q3 659 aaKnown RBP12.63□□□□□ -0.39
SATB1-213ENST00000476178 PTPRUQ92729 1446 aa12.62□□□□□ -0.39
SATB1-213ENST00000476178 SPHKAPQ2M3C7 1700 aa12.62□□□□□ -0.39
SATB1-213ENST00000476178 VGFO15240 615 aaPredicted RBP12.62□□□□□ -0.39
SATB1-213ENST00000476178 POTEAQ6S8J7 498 aa12.62□□□□□ -0.39
SATB1-213ENST00000476178 PHLPP1O60346 1717 aa12.62□□□□□ -0.39
SATB1-213ENST00000476178 METP08581 1390 aa12.61□□□□□ -0.39
SATB1-213ENST00000476178 BRINP3Q76B58 766 aa12.6□□□□□ -0.39
SATB1-213ENST00000476178 CLTCL1P53675 1640 aa12.59□□□□□ -0.39
SATB1-213ENST00000476178 NUTM2BA6NNL0 878 aaPredicted RBP12.59□□□□□ -0.39
SATB1-213ENST00000476178 NUTM2EB1AL46 878 aaPredicted RBP12.59□□□□□ -0.39
SATB1-213ENST00000476178 NUTM2AQ8IVF1 878 aaPredicted RBP12.59□□□□□ -0.39
SATB1-213ENST00000476178 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.59□□□□□ -0.39
SATB1-213ENST00000476178 SPATA31A6Q5VVP1 1343 aa12.59□□□□□ -0.39
SATB1-213ENST00000476178 FOXD1Q16676 465 aa12.58□□□□□ -0.4
SATB1-213ENST00000476178 RPGRIP1LQ68CZ1 1315 aa12.58□□□□□ -0.4
SATB1-213ENST00000476178 SETBP1Q9Y6X0 1596 aa12.57□□□□□ -0.4
SATB1-213ENST00000476178 MPHOSPH9Q99550 1183 aa12.56□□□□□ -0.4
SATB1-213ENST00000476178 NEXMIFQ5QGS0 1516 aa12.56□□□□□ -0.4
SATB1-213ENST00000476178 KIF1BO60333 1816 aa12.55□□□□□ -0.4
SATB1-213ENST00000476178 NRXN3Q9Y4C0 1643 aa12.55□□□□□ -0.4
SATB1-213ENST00000476178 DCCP43146 1447 aa12.55□□□□□ -0.4
SATB1-213ENST00000476178 RGL3Q3MIN7 710 aa12.55□□□□□ -0.4
SATB1-213ENST00000476178 ZNF772Q68DY9 489 aaPredicted RBP12.55□□□□□ -0.4
SATB1-213ENST00000476178 LRRC59Q96AG4 307 aaKnown RBP12.55□□□□□ -0.4
SATB1-213ENST00000476178 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
SATB1-213ENST00000476178 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
SATB1-213ENST00000476178 DDX17Q92841 729 aaKnown RBP12.53□□□□□ -0.4
SATB1-213ENST00000476178 XRN1Q8IZH2 1706 aaKnown RBP12.53□□□□□ -0.4
SATB1-213ENST00000476178 MST1RQ04912 1400 aa12.53□□□□□ -0.4
SATB1-213ENST00000476178 ADGRL3Q9HAR2 1447 aa12.53□□□□□ -0.4
SATB1-213ENST00000476178 AHDC1Q5TGY3 1603 aaPredicted RBP12.52□□□□□ -0.4
SATB1-213ENST00000476178 STK26Q9P289 416 aa12.51□□□□□ -0.41
SATB1-213ENST00000476178 ACIN1Q9UKV3 1341 aaKnown RBP12.51□□□□□ -0.41
SATB1-213ENST00000476178 CCDC144AA2RUR9 1427 aa12.51□□□□□ -0.41
SATB1-213ENST00000476178 ASXL1Q8IXJ9 1541 aa12.51□□□□□ -0.41
SATB1-213ENST00000476178 LRP6O75581 1613 aa12.51□□□□□ -0.41
SATB1-213ENST00000476178 RXRBP28702 533 aa12.5□□□□□ -0.41
SATB1-213ENST00000476178 ROBO2Q9HCK4 1378 aa12.5□□□□□ -0.41
SATB1-213ENST00000476178 ADGRF5Q8IZF2 1346 aa12.49□□□□□ -0.41
SATB1-213ENST00000476178 ORAI2Q96SN7 254 aa12.49□□□□□ -0.41
SATB1-213ENST00000476178 SPATA31E1Q6ZUB1 1445 aa12.48□□□□□ -0.41
SATB1-213ENST00000476178 RAB3GAP2Q9H2M9 1393 aa12.48□□□□□ -0.41
SATB1-213ENST00000476178 C8orf37Q96NL8 207 aa12.48□□□□□ -0.41
SATB1-213ENST00000476178 C1orf167Q5SNV9 1468 aa12.47□□□□□ -0.41
SATB1-213ENST00000476178 PTCH1Q13635 1447 aa12.47□□□□□ -0.41
SATB1-213ENST00000476178 AFF2P51816 1311 aa12.47□□□□□ -0.41
SATB1-213ENST00000476178 ADAMTS2O95450 1211 aa12.47□□□□□ -0.41
SATB1-213ENST00000476178 ESCO1Q5FWF5 840 aa12.47□□□□□ -0.41
SATB1-213ENST00000476178 SHPRHQ149N8 1683 aa12.47□□□□□ -0.41
SATB1-213ENST00000476178 ANKRD30BQ9BXX2 1392 aa12.46□□□□□ -0.41
SATB1-213ENST00000476178 TMEM132EQ6IEE7 984 aa12.46□□□□□ -0.41
SATB1-213ENST00000476178 NGLY1Q96IV0 654 aa12.46□□□□□ -0.41
SATB1-213ENST00000476178 PPLO60437 1756 aa12.46□□□□□ -0.42
SATB1-213ENST00000476178 NUTM2FA1L443 756 aa12.45□□□□□ -0.42
SATB1-213ENST00000476178 HRCP23327 699 aa12.45□□□□□ -0.42
SATB1-213ENST00000476178 WAPLQ7Z5K2 1190 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms