RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 ERICH3Q5RHP9 1530 aa7.43□□□□□ -1.22
VPS13D-206ENST00000476045 MAP3K7O43318 606 aa7.43□□□□□ -1.22
VPS13D-206ENST00000476045 HCSTQ9UBK5 93 aa7.43□□□□□ -1.22
VPS13D-206ENST00000476045 RBM33Q96EV2 1170 aaKnown RBP7.42□□□□□ -1.22
VPS13D-206ENST00000476045 TDRD9Q8NDG6 1382 aaKnown RBP7.42□□□□□ -1.22
VPS13D-206ENST00000476045 THSD4Q6ZMP0 1018 aa7.41□□□□□ -1.22
VPS13D-206ENST00000476045 MRPL50Q8N5N7 158 aaKnown RBP7.41□□□□□ -1.22
VPS13D-206ENST00000476045 TTC13Q8NBP0 860 aa7.41□□□□□ -1.22
VPS13D-206ENST00000476045 GRXCR2A6NFK2 248 aa7.4□□□□□ -1.22
VPS13D-206ENST00000476045 MLLT3P42568 568 aaPredicted RBP7.4□□□□□ -1.22
VPS13D-206ENST00000476045 CDHR5Q9HBB8 845 aa7.4□□□□□ -1.22
VPS13D-206ENST00000476045 NPDC1Q9NQX5 325 aaPredicted RBP7.4□□□□□ -1.22
VPS13D-206ENST00000476045 TSKSQ9UJT2 592 aa7.4□□□□□ -1.22
VPS13D-206ENST00000476045 GRIN2AQ12879 1464 aa7.4□□□□□ -1.22
VPS13D-206ENST00000476045 SHROOM2Q13796 1616 aa7.4□□□□□ -1.22
VPS13D-206ENST00000476045 CUL7Q14999 1698 aa7.39□□□□□ -1.23
VPS13D-206ENST00000476045 PRSS12P56730 875 aa7.39□□□□□ -1.23
VPS13D-206ENST00000476045 KIAA1468Q9P260 1216 aa7.39□□□□□ -1.23
VPS13D-206ENST00000476045 FAM198AQ9UFP1 575 aa7.39□□□□□ -1.23
VPS13D-206ENST00000476045 KDM2AQ9Y2K7 1162 aa7.39□□□□□ -1.23
VPS13D-206ENST00000476045 KCTD12Q96CX2 325 aaKnown RBP7.38□□□□□ -1.23
VPS13D-206ENST00000476045 FHAD1B1AJZ9 1412 aa7.37□□□□□ -1.23
VPS13D-206ENST00000476045 NUP160Q12769 1436 aa7.37□□□□□ -1.23
VPS13D-206ENST00000476045 TESPA1A2RU30 521 aaPredicted RBP7.37□□□□□ -1.23
VPS13D-206ENST00000476045 FAM98CQ17RN3 349 aaKnown RBP7.37□□□□□ -1.23
VPS13D-206ENST00000476045 CDCA7LQ96GN5 454 aa7.37□□□□□ -1.23
VPS13D-206ENST00000476045 STAC3Q96MF2 364 aa7.37□□□□□ -1.23
VPS13D-206ENST00000476045 RUSC2Q8N2Y8 1516 aa7.37□□□□□ -1.23
VPS13D-206ENST00000476045 SUPT5HO00267 1087 aaKnown RBP7.36□□□□□ -1.23
VPS13D-206ENST00000476045 HAP1P54257 671 aaPredicted RBP7.36□□□□□ -1.23
VPS13D-206ENST00000476045 VSIG10Q8N0Z9 540 aa7.36□□□□□ -1.23
VPS13D-206ENST00000476045 CHMP7Q8WUX9 453 aaPredicted RBP7.36□□□□□ -1.23
VPS13D-206ENST00000476045 WNT2BQ93097 391 aa7.36□□□□□ -1.23
VPS13D-206ENST00000476045 CEP170Q5SW79 1584 aa7.36□□□□□ -1.23
VPS13D-206ENST00000476045 ZFRQ96KR1 1074 aaKnown RBP7.35□□□□□ -1.23
VPS13D-206ENST00000476045 SOWAHBA6NEL2 793 aa7.34□□□□□ -1.23
VPS13D-206ENST00000476045 C3orf80F5H4A9 247 aa7.34□□□□□ -1.23
VPS13D-206ENST00000476045 SEMA3EO15041 775 aa7.34□□□□□ -1.23
VPS13D-206ENST00000476045 IFFO2Q5TF58 517 aa7.34□□□□□ -1.23
VPS13D-206ENST00000476045 PACS2Q86VP3 889 aa7.34□□□□□ -1.23
VPS13D-206ENST00000476045 ANKK1Q8NFD2 765 aa7.34□□□□□ -1.23
VPS13D-206ENST00000476045 NBPF26B4DH59 902 aa7.33□□□□□ -1.24
VPS13D-206ENST00000476045 PTGDRQ13258 359 aa7.33□□□□□ -1.24
VPS13D-206ENST00000476045 SEPT9Q9UHD8 586 aaPredicted RBP7.33□□□□□ -1.24
VPS13D-206ENST00000476045 NYAP1Q6ZVC0 841 aa7.32□□□□□ -1.24
VPS13D-206ENST00000476045 GOLGA8CPA6NN73 597 aa7.31□□□□□ -1.24
VPS13D-206ENST00000476045 GPR37O15354 613 aa7.3□□□□□ -1.24
VPS13D-206ENST00000476045 PADI6Q6TGC4 694 aa7.3□□□□□ -1.24
VPS13D-206ENST00000476045 TATDN2Q93075 761 aa7.3□□□□□ -1.24
VPS13D-206ENST00000476045 KIF27Q86VH2 1401 aa7.29□□□□□ -1.24
VPS13D-206ENST00000476045 BCAMP50895 628 aa7.29□□□□□ -1.24
VPS13D-206ENST00000476045 CYB5RLQ6IPT4 315 aa7.29□□□□□ -1.24
VPS13D-206ENST00000476045 ITGBL1O95965 494 aaPredicted RBP7.28□□□□□ -1.24
VPS13D-206ENST00000476045 EYA1Q99502 592 aa7.28□□□□□ -1.24
VPS13D-206ENST00000476045 PLA2G2EQ9NZK7 142 aa7.28□□□□□ -1.24
VPS13D-206ENST00000476045 PTPN5P54829 565 aa7.27□□□□□ -1.25
VPS13D-206ENST00000476045 LRCH3Q96II8 777 aa7.27□□□□□ -1.25
VPS13D-206ENST00000476045 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.27□□□□□ -1.25
VPS13D-206ENST00000476045 PNMA3Q9UL41 463 aa7.27□□□□□ -1.25
VPS13D-206ENST00000476045 ERCC6L2Q5T890 1561 aa7.27□□□□□ -1.25
VPS13D-206ENST00000476045 KIF13AQ9H1H9 1805 aa7.27□□□□□ -1.25
VPS13D-206ENST00000476045 NUDT18Q6ZVK8 323 aa7.26□□□□□ -1.25
VPS13D-206ENST00000476045 TSR3Q9UJK0 312 aaKnown RBP7.26□□□□□ -1.25
VPS13D-206ENST00000476045 MAPKBP1O60336 1514 aa7.26□□□□□ -1.25
VPS13D-206ENST00000476045 SMAPO00193 183 aa7.25□□□□□ -1.25
VPS13D-206ENST00000476045 FCHSD2O94868 740 aa7.25□□□□□ -1.25
VPS13D-206ENST00000476045 SMYD5Q6GMV2 418 aa7.25□□□□□ -1.25
VPS13D-206ENST00000476045 ADGRG1Q9Y653 693 aa7.25□□□□□ -1.25
VPS13D-206ENST00000476045 KIAA0586Q9BVV6 1533 aa7.25□□□□□ -1.25
VPS13D-206ENST00000476045 IQGAP2Q13576 1575 aa7.25□□□□□ -1.25
VPS13D-206ENST00000476045 HIC1Q14526 733 aa7.24□□□□□ -1.25
VPS13D-206ENST00000476045 WBP1LQ9NX94 342 aa7.24□□□□□ -1.25
VPS13D-206ENST00000476045 CTTNBP2Q8WZ74 1663 aa7.24□□□□□ -1.25
VPS13D-206ENST00000476045 SAMD7Q7Z3H4 446 aa7.23□□□□□ -1.25
VPS13D-206ENST00000476045 HPS5Q9UPZ3 1129 aa7.23□□□□□ -1.25
VPS13D-206ENST00000476045 PRG4Q92954 1404 aaPredicted RBP7.23□□□□□ -1.25
VPS13D-206ENST00000476045 ADCY10Q96PN6 1610 aa7.23□□□□□ -1.25
VPS13D-206ENST00000476045 RBM26Q5T8P6 1007 aaKnown RBP7.22□□□□□ -1.25
VPS13D-206ENST00000476045 DIP2BQ9P265 1576 aa7.21□□□□□ -1.25
VPS13D-206ENST00000476045 NUTM2FA1L443 756 aa7.21□□□□□ -1.26
VPS13D-206ENST00000476045 NECTIN2Q92692 538 aa7.2□□□□□ -1.26
VPS13D-206ENST00000476045 TMEM134Q9H6X4 195 aa7.2□□□□□ -1.26
VPS13D-206ENST00000476045 CARMIL2Q6F5E8 1435 aa7.19□□□□□ -1.26
VPS13D-206ENST00000476045 A0A0G2JS52 829 aa7.19□□□□□ -1.26
VPS13D-206ENST00000476045 GNPATO15228 680 aa7.19□□□□□ -1.26
VPS13D-206ENST00000476045 DNAJB2P25686 324 aa7.19□□□□□ -1.26
VPS13D-206ENST00000476045 SWT1Q5T5J6 900 aaKnown RBP7.19□□□□□ -1.26
VPS13D-206ENST00000476045 RBM46Q8TBY0 533 aaKnown RBP7.19□□□□□ -1.26
VPS13D-206ENST00000476045 PXYLP1Q8TE99 480 aa7.19□□□□□ -1.26
VPS13D-206ENST00000476045 IGF1RP08069 1367 aa7.19□□□□□ -1.26
VPS13D-206ENST00000476045 UGGT2Q9NYU1 1516 aa7.18□□□□□ -1.26
VPS13D-206ENST00000476045 RGS20O76081 388 aa7.18□□□□□ -1.26
VPS13D-206ENST00000476045 SLF2Q8IX21 1173 aa7.18□□□□□ -1.26
VPS13D-206ENST00000476045 ABCC10Q5T3U5 1492 aa7.17□□□□□ -1.26
VPS13D-206ENST00000476045 RAPGEF2Q9Y4G8 1499 aa7.17□□□□□ -1.26
VPS13D-206ENST00000476045 KIAA0556O60303 1618 aa7.17□□□□□ -1.26
VPS13D-206ENST00000476045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.17□□□□□ -1.26
VPS13D-206ENST00000476045 CARMIL1Q5VZK9 1371 aa7.17□□□□□ -1.26
VPS13D-206ENST00000476045 RCCD1A6NED2 376 aa7.16□□□□□ -1.26
VPS13D-206ENST00000476045 OATP04181 439 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms