RNA–Protein interactions for RNA: ENST00000475980.1

COL11A1-209, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-209ENST00000475980 ZNF518AQ6AHZ1 1483 aa11.35□□□□□ -0.59
COL11A1-209ENST00000475980 SUPT6HQ7KZ85 1726 aaKnown RBP11.35□□□□□ -0.59
COL11A1-209ENST00000475980 TOM1O60784 492 aa11.34□□□□□ -0.59
COL11A1-209ENST00000475980 PKD2Q13563 968 aa11.34□□□□□ -0.59
COL11A1-209ENST00000475980 ZNF467Q7Z7K2 595 aaPredicted RBP11.34□□□□□ -0.59
COL11A1-209ENST00000475980 ALKQ9UM73 1620 aa11.33□□□□□ -0.6
COL11A1-209ENST00000475980 PLCH2O75038 1416 aa11.33□□□□□ -0.6
COL11A1-209ENST00000475980 MYO3AQ8NEV4 1616 aa11.32□□□□□ -0.6
COL11A1-209ENST00000475980 SRCAPQ6ZRS2 3230 aa11.32□□□□□ -0.6
COL11A1-209ENST00000475980 ABCA6Q8N139 1617 aa11.31□□□□□ -0.6
COL11A1-209ENST00000475980 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
COL11A1-209ENST00000475980 PTPRKQ15262 1439 aa11.31□□□□□ -0.6
COL11A1-209ENST00000475980 MYO5CQ9NQX4 1742 aa11.31□□□□□ -0.6
COL11A1-209ENST00000475980 PRXQ9BXM0 1461 aa11.31□□□□□ -0.6
COL11A1-209ENST00000475980 CEP170BQ9Y4F5 1589 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-209ENST00000475980 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
COL11A1-209ENST00000475980 NCKAP5LQ9HCH0 1330 aa11.3□□□□□ -0.6
COL11A1-209ENST00000475980 PIP4K2BP78356 416 aa11.29□□□□□ -0.6
COL11A1-209ENST00000475980 RGS17Q9UGC6 210 aaPredicted RBP11.29□□□□□ -0.6
COL11A1-209ENST00000475980 MLH3Q9UHC1 1453 aa11.28□□□□□ -0.6
COL11A1-209ENST00000475980 POLR1AO95602 1720 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-209ENST00000475980 SHANK2Q9UPX8 1470 aa11.26□□□□□ -0.61
COL11A1-209ENST00000475980 LSM11P83369 360 aaKnown RBP eCLIP11.26□□□□□ -0.61
COL11A1-209ENST00000475980 ESF1Q9H501 851 aaKnown RBP11.26□□□□□ -0.61
COL11A1-209ENST00000475980 PSEN1P49768 467 aa11.25□□□□□ -0.61
COL11A1-209ENST00000475980 NEURL4Q96JN8 1562 aa11.24□□□□□ -0.61
COL11A1-209ENST00000475980 EFCAB2Q5VUJ9 269 aa11.23□□□□□ -0.61
COL11A1-209ENST00000475980 P3H3Q8IVL6 736 aa11.23□□□□□ -0.61
COL11A1-209ENST00000475980 RNF17Q9BXT8 1623 aaKnown RBP11.23□□□□□ -0.61
COL11A1-209ENST00000475980 SETD1AO15047 1707 aaKnown RBP11.22□□□□□ -0.61
COL11A1-209ENST00000475980 RGS20O76081 388 aa11.22□□□□□ -0.61
COL11A1-209ENST00000475980 VWDEQ8N2E2 1590 aa11.22□□□□□ -0.61
COL11A1-209ENST00000475980 GPR153Q6NV75 609 aa11.21□□□□□ -0.61
COL11A1-209ENST00000475980 DNMT1P26358 1616 aaKnown RBP11.2□□□□□ -0.62
COL11A1-209ENST00000475980 SYNMO15061 1565 aa11.2□□□□□ -0.62
COL11A1-209ENST00000475980 ZMYM3Q14202 1370 aa11.2□□□□□ -0.62
COL11A1-209ENST00000475980 KIDINS220Q9ULH0 1771 aa11.2□□□□□ -0.62
COL11A1-209ENST00000475980 CLTCQ00610 1675 aaKnown RBP11.19□□□□□ -0.62
COL11A1-209ENST00000475980 A2ML1A8K2U0 1454 aa11.19□□□□□ -0.62
COL11A1-209ENST00000475980 AFAP1Q8N556 730 aa11.18□□□□□ -0.62
COL11A1-209ENST00000475980 ITSN2Q9NZM3 1697 aa11.17□□□□□ -0.62
COL11A1-209ENST00000475980 POTEAQ6S8J7 498 aa11.17□□□□□ -0.62
COL11A1-209ENST00000475980 ARHGAP5Q13017 1502 aa11.17□□□□□ -0.62
COL11A1-209ENST00000475980 ABCC1P33527 1531 aa11.16□□□□□ -0.62
COL11A1-209ENST00000475980 CDK13Q14004 1512 aaKnown RBP11.16□□□□□ -0.62
COL11A1-209ENST00000475980 DEPDC5O75140 1603 aa11.16□□□□□ -0.62
COL11A1-209ENST00000475980 KIF14Q15058 1648 aa11.16□□□□□ -0.62
COL11A1-209ENST00000475980 CDC42BPBQ9Y5S2 1711 aa11.15□□□□□ -0.62
COL11A1-209ENST00000475980 MED14O60244 1454 aa11.14□□□□□ -0.63
COL11A1-209ENST00000475980 PLXNC1O60486 1568 aa11.14□□□□□ -0.63
COL11A1-209ENST00000475980 STRCP1A6NGW2 1772 aa11.13□□□□□ -0.63
COL11A1-209ENST00000475980 CABP2Q9NPB3 220 aa11.13□□□□□ -0.63
COL11A1-209ENST00000475980 LRRC7Q96NW7 1537 aa11.13□□□□□ -0.63
COL11A1-209ENST00000475980 PREX2Q70Z35 1606 aa11.12□□□□□ -0.63
COL11A1-209ENST00000475980 GSE1Q14687 1217 aa11.11□□□□□ -0.63
COL11A1-209ENST00000475980 IQGAP1P46940 1657 aa11.11□□□□□ -0.63
COL11A1-209ENST00000475980 ZNF316A6NFI3 1004 aaPredicted RBP11.1□□□□□ -0.63
COL11A1-209ENST00000475980 PDAP1Q13442 181 aaKnown RBP11.1□□□□□ -0.63
COL11A1-209ENST00000475980 CHRM1P11229 460 aaPredicted RBP11.09□□□□□ -0.63
COL11A1-209ENST00000475980 ARSIQ5FYB1 569 aa11.09□□□□□ -0.63
COL11A1-209ENST00000475980 UPF1Q92900 1129 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL11A1-209ENST00000475980 SAMD9LQ8IVG5 1584 aa11.08□□□□□ -0.64
COL11A1-209ENST00000475980 NPHP4O75161 1426 aaPredicted RBP11.08□□□□□ -0.64
COL11A1-209ENST00000475980 TROQ12816 1431 aaPredicted RBP11.08□□□□□ -0.64
COL11A1-209ENST00000475980 PBX2P40425 430 aa11.07□□□□□ -0.64
COL11A1-209ENST00000475980 FAM135BQ49AJ0 1406 aa11.07□□□□□ -0.64
COL11A1-209ENST00000475980 XIRP1Q702N8 1843 aaKnown RBP11.07□□□□□ -0.64
COL11A1-209ENST00000475980 FAM135AQ9P2D6 1515 aa11.05□□□□□ -0.64
COL11A1-209ENST00000475980 TMEM92Q6UXU6 159 aa11.05□□□□□ -0.64
COL11A1-209ENST00000475980 INO80Q9ULG1 1556 aaPredicted RBP11.05□□□□□ -0.64
COL11A1-209ENST00000475980 ZC3H13Q5T200 1668 aaKnown RBP11.04□□□□□ -0.64
COL11A1-209ENST00000475980 CLIP1P30622 1438 aa11.04□□□□□ -0.64
COL11A1-209ENST00000475980 Q6ZNB5 142 aa11.04□□□□□ -0.64
COL11A1-209ENST00000475980 ANKLE2Q86XL3 938 aa11.04□□□□□ -0.64
COL11A1-209ENST00000475980 CDK11AQ9UQ88 783 aaPredicted RBP11.04□□□□□ -0.64
COL11A1-209ENST00000475980 ATP7AQ04656 1500 aa11.04□□□□□ -0.64
COL11A1-209ENST00000475980 NLRP1Q9C000 1473 aa11.03□□□□□ -0.64
COL11A1-209ENST00000475980 ADGBQ8N7X0 1667 aa11.02□□□□□ -0.64
COL11A1-209ENST00000475980 A2MP01023 1474 aa11.02□□□□□ -0.65
COL11A1-209ENST00000475980 CDC42BPAQ5VT25 1732 aa11.02□□□□□ -0.65
COL11A1-209ENST00000475980 TNRQ92752 1358 aa11.02□□□□□ -0.65
COL11A1-209ENST00000475980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.02□□□□□ -0.65
COL11A1-209ENST00000475980 PZPP20742 1482 aa11.01□□□□□ -0.65
COL11A1-209ENST00000475980 CDK12Q9NYV4 1490 aaPredicted RBP11.01□□□□□ -0.65
COL11A1-209ENST00000475980 UGGT1Q9NYU2 1555 aa11.01□□□□□ -0.65
COL11A1-209ENST00000475980 ROBO1Q9Y6N7 1651 aa11.01□□□□□ -0.65
COL11A1-209ENST00000475980 KDM5DQ9BY66 1539 aa11□□□□□ -0.65
COL11A1-209ENST00000475980 THEMISQ8N1K5 641 aaPredicted RBP10.99□□□□□ -0.65
COL11A1-209ENST00000475980 KHSRPQ92945 711 aaKnown RBP eCLIP10.99□□□□□ -0.65
COL11A1-209ENST00000475980 MICALL2Q8IY33 904 aa10.98□□□□□ -0.65
COL11A1-209ENST00000475980 FMN1Q68DA7 1419 aa10.98□□□□□ -0.65
COL11A1-209ENST00000475980 LRRC9Q6ZRR7 1453 aa10.98□□□□□ -0.65
COL11A1-209ENST00000475980 SYCP2Q9BX26 1530 aa10.98□□□□□ -0.65
COL11A1-209ENST00000475980 LRRIQ1Q96JM4 1722 aa10.98□□□□□ -0.65
COL11A1-209ENST00000475980 AXIN2Q9Y2T1 843 aa10.97□□□□□ -0.65
COL11A1-209ENST00000475980 SPAG9O60271 1321 aaKnown RBP10.97□□□□□ -0.65
COL11A1-209ENST00000475980 JCADQ9P266 1359 aa10.95□□□□□ -0.66
COL11A1-209ENST00000475980 PHLPP1O60346 1717 aa10.95□□□□□ -0.66
COL11A1-209ENST00000475980 MIA2Q96PC5 1412 aa10.94□□□□□ -0.66
COL11A1-209ENST00000475980 KIAA1107Q9UPP5 1409 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms