RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 UNC13BO14795 1591 aa16.43■□□□□ 0.22
LSG1-207ENST00000475763 ZMYM4Q5VZL5 1548 aa16.42■□□□□ 0.22
LSG1-207ENST00000475763 TRIM52Q96A61 297 aa16.42■□□□□ 0.22
LSG1-207ENST00000475763 EIF2AK4Q9P2K8 1649 aaKnown RBP16.41■□□□□ 0.22
LSG1-207ENST00000475763 FRMPD1Q5SYB0 1578 aa16.4■□□□□ 0.22
LSG1-207ENST00000475763 IFNLR1Q8IU57 520 aaPredicted RBP16.4■□□□□ 0.22
LSG1-207ENST00000475763 MPHOSPH9Q99550 1183 aa16.39■□□□□ 0.21
LSG1-207ENST00000475763 PZPP20742 1482 aa16.39■□□□□ 0.21
LSG1-207ENST00000475763 MAGI2Q86UL8 1455 aa16.39■□□□□ 0.21
LSG1-207ENST00000475763 DHX29Q7Z478 1369 aaKnown RBP16.38■□□□□ 0.21
LSG1-207ENST00000475763 POTEJP0CG39 1038 aa16.38■□□□□ 0.21
LSG1-207ENST00000475763 POTEFA5A3E0 1075 aa16.37■□□□□ 0.21
LSG1-207ENST00000475763 RAPGEF3O95398 923 aa16.37■□□□□ 0.21
LSG1-207ENST00000475763 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
LSG1-207ENST00000475763 DEPDC5O75140 1603 aa16.37■□□□□ 0.21
LSG1-207ENST00000475763 A2MP01023 1474 aa16.36■□□□□ 0.21
LSG1-207ENST00000475763 ABCA6Q8N139 1617 aa16.36■□□□□ 0.21
LSG1-207ENST00000475763 NUP155O75694 1391 aa16.36■□□□□ 0.21
LSG1-207ENST00000475763 BCORL1Q5H9F3 1711 aa16.36■□□□□ 0.21
LSG1-207ENST00000475763 IQGAP3Q86VI3 1631 aa16.35■□□□□ 0.21
LSG1-207ENST00000475763 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
LSG1-207ENST00000475763 DIP2CQ9Y2E4 1556 aa16.34■□□□□ 0.21
LSG1-207ENST00000475763 GSE1Q14687 1217 aa16.33■□□□□ 0.2
LSG1-207ENST00000475763 TMEM106CQ9BVX2 250 aa16.33■□□□□ 0.2
LSG1-207ENST00000475763 FAM135AQ9P2D6 1515 aa16.32■□□□□ 0.2
LSG1-207ENST00000475763 RNF17Q9BXT8 1623 aaKnown RBP16.31■□□□□ 0.2
LSG1-207ENST00000475763 REREQ9P2R6 1566 aa16.31■□□□□ 0.2
LSG1-207ENST00000475763 PCDHB8Q9UN66 801 aa16.31■□□□□ 0.2
LSG1-207ENST00000475763 TIMELESSQ9UNS1 1208 aa16.31■□□□□ 0.2
LSG1-207ENST00000475763 PRDM15P57071 1507 aaPredicted RBP16.3■□□□□ 0.2
LSG1-207ENST00000475763 COLQQ9Y215 455 aaPredicted RBP16.29■□□□□ 0.2
LSG1-207ENST00000475763 VWDEQ8N2E2 1590 aa16.29■□□□□ 0.2
LSG1-207ENST00000475763 COL17A1Q9UMD9 1497 aaPredicted RBP16.29■□□□□ 0.2
LSG1-207ENST00000475763 ANKRD30BQ9BXX2 1392 aa16.28■□□□□ 0.2
LSG1-207ENST00000475763 SPOCK2Q92563 424 aa16.28■□□□□ 0.2
LSG1-207ENST00000475763 YEATS2Q9ULM3 1422 aa16.28■□□□□ 0.2
LSG1-207ENST00000475763 KANK1Q14678 1352 aa16.27■□□□□ 0.2
LSG1-207ENST00000475763 MROH1Q8NDA8 1641 aa16.27■□□□□ 0.2
LSG1-207ENST00000475763 ATP10AO60312 1499 aa16.27■□□□□ 0.19
LSG1-207ENST00000475763 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
LSG1-207ENST00000475763 KIF3BO15066 747 aa16.26■□□□□ 0.19
LSG1-207ENST00000475763 PKD2Q13563 968 aa16.26■□□□□ 0.19
LSG1-207ENST00000475763 TET3O43151 1660 aa16.25■□□□□ 0.19
LSG1-207ENST00000475763 AGLP35573 1532 aa16.24■□□□□ 0.19
LSG1-207ENST00000475763 LMTK2Q8IWU2 1503 aa16.24■□□□□ 0.19
LSG1-207ENST00000475763 SEC24BO95487 1268 aa16.23■□□□□ 0.19
LSG1-207ENST00000475763 SIN3AQ96ST3 1273 aa16.23■□□□□ 0.19
LSG1-207ENST00000475763 IER5LQ5T953 404 aa16.22■□□□□ 0.19
LSG1-207ENST00000475763 RPRD2Q5VT52 1461 aaKnown RBP16.22■□□□□ 0.19
LSG1-207ENST00000475763 NEUROD1Q13562 356 aa16.2■□□□□ 0.18
LSG1-207ENST00000475763 ZC3H13Q5T200 1668 aaKnown RBP16.2■□□□□ 0.18
LSG1-207ENST00000475763 TONSLQ96HA7 1378 aa16.19■□□□□ 0.18
LSG1-207ENST00000475763 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
LSG1-207ENST00000475763 E9PCH4 1651 aa16.18■□□□□ 0.18
LSG1-207ENST00000475763 CHRM1P11229 460 aaPredicted RBP16.18■□□□□ 0.18
LSG1-207ENST00000475763 EFCAB6Q5THR3 1501 aa16.18■□□□□ 0.18
LSG1-207ENST00000475763 MAMSTRQ6ZN01 415 aa16.17■□□□□ 0.18
LSG1-207ENST00000475763 CEP152O94986 1710 aa16.16■□□□□ 0.18
LSG1-207ENST00000475763 ABCC3O15438 1527 aa16.15■□□□□ 0.18
LSG1-207ENST00000475763 ZNF467Q7Z7K2 595 aaPredicted RBP16.15■□□□□ 0.18
LSG1-207ENST00000475763 SPHKAPQ2M3C7 1700 aa16.14■□□□□ 0.17
LSG1-207ENST00000475763 PTPRTO14522 1441 aa16.14■□□□□ 0.17
LSG1-207ENST00000475763 GGT6Q6P531 493 aa16.14■□□□□ 0.17
LSG1-207ENST00000475763 PLA2R1Q13018 1463 aa16.14■□□□□ 0.17
LSG1-207ENST00000475763 SCUBE2Q9NQ36 999 aa16.13■□□□□ 0.17
LSG1-207ENST00000475763 TRPM2O94759 1503 aa16.13■□□□□ 0.17
LSG1-207ENST00000475763 CAMSAP1Q5T5Y3 1602 aa16.12■□□□□ 0.17
LSG1-207ENST00000475763 CCDC144AA2RUR9 1427 aa16.12■□□□□ 0.17
LSG1-207ENST00000475763 WASHC2CQ9Y4E1 1318 aa16.12■□□□□ 0.17
LSG1-207ENST00000475763 ARHGAP31Q2M1Z3 1444 aa16.11■□□□□ 0.17
LSG1-207ENST00000475763 SIGLEC1Q9BZZ2 1709 aa16.11■□□□□ 0.17
LSG1-207ENST00000475763 PPP1R15AO75807 674 aaPredicted RBP16.1■□□□□ 0.17
LSG1-207ENST00000475763 IRX5P78411 483 aaPredicted RBP16.1■□□□□ 0.17
LSG1-207ENST00000475763 PLCG2P16885 1265 aa16.08■□□□□ 0.16
LSG1-207ENST00000475763 NPATQ14207 1427 aa16.08■□□□□ 0.16
LSG1-207ENST00000475763 NEURL4Q96JN8 1562 aa16.07■□□□□ 0.16
LSG1-207ENST00000475763 CNTLNQ9NXG0 1405 aa16.06■□□□□ 0.16
LSG1-207ENST00000475763 L3MBTL2Q969R5 705 aa16.06■□□□□ 0.16
LSG1-207ENST00000475763 PSEN1P49768 467 aa16.04■□□□□ 0.16
LSG1-207ENST00000475763 CLTCL1P53675 1640 aa16.04■□□□□ 0.16
LSG1-207ENST00000475763 NOS1P29475 1434 aa16.03■□□□□ 0.16
LSG1-207ENST00000475763 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.16
LSG1-207ENST00000475763 KIF1BO60333 1816 aa16.01■□□□□ 0.15
LSG1-207ENST00000475763 SPATA31E1Q6ZUB1 1445 aa16.01■□□□□ 0.15
LSG1-207ENST00000475763 MROH2AA6NES4 1674 aa16■□□□□ 0.15
LSG1-207ENST00000475763 PREX1Q8TCU6 1659 aa16■□□□□ 0.15
LSG1-207ENST00000475763 OCEL1Q9H607 264 aa16■□□□□ 0.15
LSG1-207ENST00000475763 CFAP65Q6ZU64 1925 aaKnown RBP16■□□□□ 0.15
LSG1-207ENST00000475763 ARID4BQ4LE39 1312 aaPredicted RBP15.99■□□□□ 0.15
LSG1-207ENST00000475763 PIK3C2BO00750 1634 aa15.99■□□□□ 0.15
LSG1-207ENST00000475763 STAC3Q96MF2 364 aa15.99■□□□□ 0.15
LSG1-207ENST00000475763 UHRF1BP1Q6BDS2 1440 aa15.99■□□□□ 0.15
LSG1-207ENST00000475763 PDAP1Q13442 181 aaKnown RBP15.98■□□□□ 0.15
LSG1-207ENST00000475763 SYNMO15061 1565 aa15.97■□□□□ 0.15
LSG1-207ENST00000475763 ESF1Q9H501 851 aaKnown RBP15.97■□□□□ 0.15
LSG1-207ENST00000475763 MLECQ14165 292 aa15.96■□□□□ 0.15
LSG1-207ENST00000475763 ERVK-7P63135 1459 aa15.96■□□□□ 0.14
LSG1-207ENST00000475763 SPATA31D1Q6ZQQ2 1576 aa15.96■□□□□ 0.14
LSG1-207ENST00000475763 SLC52A1Q9NWF4 448 aa15.95■□□□□ 0.14
LSG1-207ENST00000475763 UGGT1Q9NYU2 1555 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms