RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 LIMD1Q9UGP4 676 aa8.23□□□□□ -1.09
SRGAP3-205ENST00000475560 ABL2P42684 1182 aa8.22□□□□□ -1.09
SRGAP3-205ENST00000475560 TMEM92Q6UXU6 159 aa8.22□□□□□ -1.09
SRGAP3-205ENST00000475560 RIC3Q7Z5B4 369 aa8.22□□□□□ -1.09
SRGAP3-205ENST00000475560 PBXIP1Q96AQ6 731 aa8.22□□□□□ -1.09
SRGAP3-205ENST00000475560 SOCS7O14512 581 aa8.21□□□□□ -1.1
SRGAP3-205ENST00000475560 PXYLP1Q8TE99 480 aa8.21□□□□□ -1.1
SRGAP3-205ENST00000475560 PTCD2Q8WV60 388 aaKnown RBP8.21□□□□□ -1.1
SRGAP3-205ENST00000475560 RBM33Q96EV2 1170 aaKnown RBP8.21□□□□□ -1.1
SRGAP3-205ENST00000475560 TSR1Q2NL82 804 aaKnown RBP8.2□□□□□ -1.1
SRGAP3-205ENST00000475560 TUSC1Q2TAM9 212 aa8.2□□□□□ -1.1
SRGAP3-205ENST00000475560 USTQ9Y2C2 406 aa8.2□□□□□ -1.1
SRGAP3-205ENST00000475560 SLAIN1Q8ND83 568 aa8.19□□□□□ -1.1
SRGAP3-205ENST00000475560 ADGRG1Q9Y653 693 aa8.19□□□□□ -1.1
SRGAP3-205ENST00000475560 CSB-PGBD3P0DP91 1061 aa8.18□□□□□ -1.1
SRGAP3-205ENST00000475560 SRPK2P78362 688 aaKnown RBP8.18□□□□□ -1.1
SRGAP3-205ENST00000475560 HDGFL1Q5TGJ6 251 aa8.18□□□□□ -1.1
SRGAP3-205ENST00000475560 SPIRE2Q8WWL2 714 aa8.18□□□□□ -1.1
SRGAP3-205ENST00000475560 TBC1D2BQ9UPU7 963 aa8.18□□□□□ -1.1
SRGAP3-205ENST00000475560 AMOTL2Q9Y2J4 779 aa8.18□□□□□ -1.1
SRGAP3-205ENST00000475560 PCDHGA10Q9Y5H3 936 aa8.18□□□□□ -1.1
SRGAP3-205ENST00000475560 SPTLC1O15269 473 aa8.17□□□□□ -1.1
SRGAP3-205ENST00000475560 RFX1P22670 979 aa8.17□□□□□ -1.1
SRGAP3-205ENST00000475560 L3MBTL3Q96JM7 780 aaPredicted RBP8.17□□□□□ -1.1
SRGAP3-205ENST00000475560 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.16□□□□□ -1.1
SRGAP3-205ENST00000475560 CFAP70Q5T0N1 1121 aa8.15□□□□□ -1.1
SRGAP3-205ENST00000475560 TYW1BQ6NUM6 668 aa8.15□□□□□ -1.1
SRGAP3-205ENST00000475560 PADI6Q6TGC4 694 aa8.15□□□□□ -1.1
SRGAP3-205ENST00000475560 ZNF710Q8N1W2 664 aa8.15□□□□□ -1.1
SRGAP3-205ENST00000475560 CERKQ8TCT0 537 aa8.15□□□□□ -1.1
SRGAP3-205ENST00000475560 AP1G2O75843 785 aa8.14□□□□□ -1.11
SRGAP3-205ENST00000475560 CCDC27Q2M243 656 aa8.14□□□□□ -1.11
SRGAP3-205ENST00000475560 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.14□□□□□ -1.11
SRGAP3-205ENST00000475560 LILRB3O75022 631 aa8.13□□□□□ -1.11
SRGAP3-205ENST00000475560 SLC34A2O95436 690 aa8.13□□□□□ -1.11
SRGAP3-205ENST00000475560 RSBN1LQ6PCB5 846 aaPredicted RBP8.13□□□□□ -1.11
SRGAP3-205ENST00000475560 TTC13Q8NBP0 860 aa8.13□□□□□ -1.11
SRGAP3-205ENST00000475560 ADAMTS19Q8TE59 1207 aa8.13□□□□□ -1.11
SRGAP3-205ENST00000475560 CARNS1A5YM72 827 aa8.12□□□□□ -1.11
SRGAP3-205ENST00000475560 CSPP1Q1MSJ5 1256 aa8.12□□□□□ -1.11
SRGAP3-205ENST00000475560 IVNS1ABPQ9Y6Y0 642 aa8.12□□□□□ -1.11
SRGAP3-205ENST00000475560 GJA5P36382 358 aa8.11□□□□□ -1.11
SRGAP3-205ENST00000475560 QPCTQ16769 361 aa8.11□□□□□ -1.11
SRGAP3-205ENST00000475560 WASHC4Q2M389 1173 aa8.11□□□□□ -1.11
SRGAP3-205ENST00000475560 RTL5Q5HYW3 569 aaPredicted RBP8.11□□□□□ -1.11
SRGAP3-205ENST00000475560 CDAN1Q8IWY9 1227 aa8.11□□□□□ -1.11
SRGAP3-205ENST00000475560 PPP1R12CQ9BZL4 782 aa8.11□□□□□ -1.11
SRGAP3-205ENST00000475560 VRTNQ9H8Y1 702 aa8.11□□□□□ -1.11
SRGAP3-205ENST00000475560 ST18O60284 1047 aa8.1□□□□□ -1.11
SRGAP3-205ENST00000475560 CD46P15529 392 aa8.1□□□□□ -1.11
SRGAP3-205ENST00000475560 C3orf67Q6ZVT6 689 aa8.1□□□□□ -1.11
SRGAP3-205ENST00000475560 NUTM1Q86Y26 1132 aa8.1□□□□□ -1.11
SRGAP3-205ENST00000475560 RBM46Q8TBY0 533 aaKnown RBP8.1□□□□□ -1.11
SRGAP3-205ENST00000475560 RBM27Q9P2N5 1060 aaKnown RBP8.1□□□□□ -1.11
SRGAP3-205ENST00000475560 PCDHB15Q9Y5E8 787 aa8.1□□□□□ -1.11
SRGAP3-205ENST00000475560 MOXD2PA6NHM9 499 aa8.09□□□□□ -1.11
SRGAP3-205ENST00000475560 C6orf132Q5T0Z8 1188 aa8.09□□□□□ -1.11
SRGAP3-205ENST00000475560 SND1Q7KZF4 910 aaKnown RBP eCLIP8.09□□□□□ -1.11
SRGAP3-205ENST00000475560 GJD4Q96KN9 370 aaPredicted RBP8.09□□□□□ -1.11
SRGAP3-205ENST00000475560 NDUFB9Q9Y6M9 179 aa8.09□□□□□ -1.11
SRGAP3-205ENST00000475560 SNPHO15079 494 aa8.08□□□□□ -1.12
SRGAP3-205ENST00000475560 USP17L8P0C7I0 530 aa8.08□□□□□ -1.12
SRGAP3-205ENST00000475560 NDUFV2P19404 249 aa8.08□□□□□ -1.12
SRGAP3-205ENST00000475560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.07□□□□□ -1.12
SRGAP3-205ENST00000475560 NUTM2BA6NNL0 878 aaPredicted RBP8.07□□□□□ -1.12
SRGAP3-205ENST00000475560 NUTM2EB1AL46 878 aaPredicted RBP8.07□□□□□ -1.12
SRGAP3-205ENST00000475560 NUTM2DQ5VT03 806 aaPredicted RBP8.07□□□□□ -1.12
SRGAP3-205ENST00000475560 NUTM2AQ8IVF1 878 aaPredicted RBP8.07□□□□□ -1.12
SRGAP3-205ENST00000475560 PALM3A6NDB9 673 aaPredicted RBP8.06□□□□□ -1.12
SRGAP3-205ENST00000475560 LMOD1P29536 600 aaPredicted RBP8.06□□□□□ -1.12
SRGAP3-205ENST00000475560 JPH4Q96JJ6 628 aa8.06□□□□□ -1.12
SRGAP3-205ENST00000475560 ALG2Q9H553 416 aa8.06□□□□□ -1.12
SRGAP3-205ENST00000475560 RCCD1A6NED2 376 aa8.05□□□□□ -1.12
SRGAP3-205ENST00000475560 PRSS12P56730 875 aa8.05□□□□□ -1.12
SRGAP3-205ENST00000475560 PRPF38BQ5VTL8 546 aaKnown RBP8.05□□□□□ -1.12
SRGAP3-205ENST00000475560 TMEM88BA6NKF7 163 aa8.04□□□□□ -1.12
SRGAP3-205ENST00000475560 ATG7O95352 703 aa8.04□□□□□ -1.12
SRGAP3-205ENST00000475560 SULF1Q8IWU6 871 aa8.04□□□□□ -1.12
SRGAP3-205ENST00000475560 CABLES1Q8TDN4 633 aa8.04□□□□□ -1.12
SRGAP3-205ENST00000475560 TFIP11Q9UBB9 837 aaKnown RBP8.04□□□□□ -1.12
SRGAP3-205ENST00000475560 FOSBP53539 338 aa8.03□□□□□ -1.12
SRGAP3-205ENST00000475560 VAC14Q08AM6 782 aa8.03□□□□□ -1.12
SRGAP3-205ENST00000475560 DDX11L8A8MPP1 907 aa8.02□□□□□ -1.13
SRGAP3-205ENST00000475560 CDCA8Q53HL2 280 aa8.02□□□□□ -1.13
SRGAP3-205ENST00000475560 CDCA7LQ96GN5 454 aa8.02□□□□□ -1.13
SRGAP3-205ENST00000475560 EYA1Q99502 592 aa8.02□□□□□ -1.13
SRGAP3-205ENST00000475560 MYT1LQ9UL68 1186 aa8.02□□□□□ -1.13
SRGAP3-205ENST00000475560 GNEQ9Y223 722 aaKnown RBP8.02□□□□□ -1.13
SRGAP3-205ENST00000475560 PCDHGA4Q9Y5G9 962 aa8.02□□□□□ -1.13
SRGAP3-205ENST00000475560 KDM4FA0A1W2PPD8 638 aa8.01□□□□□ -1.13
SRGAP3-205ENST00000475560 ZDHHC16Q969W1 377 aa8.01□□□□□ -1.13
SRGAP3-205ENST00000475560 TRIM34Q9BYJ4 488 aa8.01□□□□□ -1.13
SRGAP3-205ENST00000475560 UNCXA6NJT0 531 aa8□□□□□ -1.13
SRGAP3-205ENST00000475560 GPR37L1O60883 481 aa8□□□□□ -1.13
SRGAP3-205ENST00000475560 CTDSPL2Q05D32 466 aa8□□□□□ -1.13
SRGAP3-205ENST00000475560 ZBTB3Q9H5J0 574 aa8□□□□□ -1.13
SRGAP3-205ENST00000475560 USP35Q9P2H5 1018 aa8□□□□□ -1.13
SRGAP3-205ENST00000475560 UCN2Q96RP3 112 aa7.99□□□□□ -1.13
SRGAP3-205ENST00000475560 HMX1Q9NP08 348 aaPredicted RBP7.99□□□□□ -1.13
SRGAP3-205ENST00000475560 RBM47A0AV96 593 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms