RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 PROSER2Q86WR7 435 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-207ENST00000475549 RIMS2Q9UQ26 1411 aa10.75□□□□□ -0.69
HDAC3-207ENST00000475549 ADGRB3O60242 1522 aa10.75□□□□□ -0.69
HDAC3-207ENST00000475549 CHGAP10645 457 aaKnown RBP10.75□□□□□ -0.69
HDAC3-207ENST00000475549 BCANQ96GW7 911 aa10.75□□□□□ -0.69
HDAC3-207ENST00000475549 PLEKHG1Q9ULL1 1385 aa10.75□□□□□ -0.69
HDAC3-207ENST00000475549 KDM5AP29375 1690 aaKnown RBP10.74□□□□□ -0.69
HDAC3-207ENST00000475549 TBX22Q9Y458 520 aa10.74□□□□□ -0.69
HDAC3-207ENST00000475549 UNC13BO14795 1591 aa10.73□□□□□ -0.69
HDAC3-207ENST00000475549 HDGFP51858 240 aaKnown RBP10.73□□□□□ -0.69
HDAC3-207ENST00000475549 FAM135BQ49AJ0 1406 aa10.73□□□□□ -0.69
HDAC3-207ENST00000475549 ADAMTS13Q76LX8 1427 aa10.73□□□□□ -0.69
HDAC3-207ENST00000475549 PPP1R15AO75807 674 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-207ENST00000475549 ADRA2BP18089 450 aa10.72□□□□□ -0.69
HDAC3-207ENST00000475549 RGS17Q9UGC6 210 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-207ENST00000475549 RRBP1Q9P2E9 1410 aaKnown RBP10.72□□□□□ -0.69
HDAC3-207ENST00000475549 TMEM131LA2VDJ0 1609 aa10.72□□□□□ -0.69
HDAC3-207ENST00000475549 MED1Q15648 1581 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-207ENST00000475549 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.71□□□□□ -0.69
HDAC3-207ENST00000475549 SLAIN2Q9P270 581 aa10.71□□□□□ -0.69
HDAC3-207ENST00000475549 E9PCH4 1651 aa10.7□□□□□ -0.7
HDAC3-207ENST00000475549 XIRP1Q702N8 1843 aaKnown RBP10.69□□□□□ -0.7
HDAC3-207ENST00000475549 IQGAP3Q86VI3 1631 aa10.69□□□□□ -0.7
HDAC3-207ENST00000475549 NKTRP30414 1462 aaKnown RBP10.68□□□□□ -0.7
HDAC3-207ENST00000475549 NAIPQ13075 1403 aa10.68□□□□□ -0.7
HDAC3-207ENST00000475549 NWD1Q149M9 1564 aa10.68□□□□□ -0.7
HDAC3-207ENST00000475549 PTPRUQ92729 1446 aa10.67□□□□□ -0.7
HDAC3-207ENST00000475549 AMOTL2Q9Y2J4 779 aa10.67□□□□□ -0.7
HDAC3-207ENST00000475549 GCC2Q8IWJ2 1684 aa10.66□□□□□ -0.7
HDAC3-207ENST00000475549 MSH6P52701 1360 aa10.66□□□□□ -0.7
HDAC3-207ENST00000475549 C19orf44Q9H6X5 657 aa10.66□□□□□ -0.7
HDAC3-207ENST00000475549 METP08581 1390 aa10.65□□□□□ -0.7
HDAC3-207ENST00000475549 PIK3R4Q99570 1358 aa10.65□□□□□ -0.71
HDAC3-207ENST00000475549 ZNF326Q5BKZ1 582 aaKnown RBP10.64□□□□□ -0.71
HDAC3-207ENST00000475549 NCOA3Q9Y6Q9 1424 aa10.64□□□□□ -0.71
HDAC3-207ENST00000475549 TRIM52Q96A61 297 aa10.63□□□□□ -0.71
HDAC3-207ENST00000475549 HFM1A2PYH4 1435 aa10.63□□□□□ -0.71
HDAC3-207ENST00000475549 MYO5BQ9ULV0 1848 aa10.63□□□□□ -0.71
HDAC3-207ENST00000475549 POTEAQ6S8J7 498 aa10.62□□□□□ -0.71
HDAC3-207ENST00000475549 C14orf37Q86TY3 774 aa10.62□□□□□ -0.71
HDAC3-207ENST00000475549 CADPS2Q86UW7 1296 aa10.62□□□□□ -0.71
HDAC3-207ENST00000475549 CHD2O14647 1828 aaKnown RBP10.61□□□□□ -0.71
HDAC3-207ENST00000475549 ROBO1Q9Y6N7 1651 aa10.61□□□□□ -0.71
HDAC3-207ENST00000475549 ATF3P18847 181 aa10.61□□□□□ -0.71
HDAC3-207ENST00000475549 PIAS4Q8N2W9 510 aaPredicted RBP10.61□□□□□ -0.71
HDAC3-207ENST00000475549 SLC4A1APQ9BWU0 796 aaKnown RBP10.61□□□□□ -0.71
HDAC3-207ENST00000475549 BRINP3Q76B58 766 aa10.6□□□□□ -0.71
HDAC3-207ENST00000475549 NRXN3Q9Y4C0 1643 aa10.59□□□□□ -0.71
HDAC3-207ENST00000475549 DIP2AQ14689 1571 aa10.59□□□□□ -0.71
HDAC3-207ENST00000475549 SETBP1Q9Y6X0 1596 aa10.59□□□□□ -0.71
HDAC3-207ENST00000475549 TRPM2O94759 1503 aa10.58□□□□□ -0.72
HDAC3-207ENST00000475549 JCADQ9P266 1359 aa10.58□□□□□ -0.72
HDAC3-207ENST00000475549 CLTCL1P53675 1640 aa10.58□□□□□ -0.72
HDAC3-207ENST00000475549 NEXMIFQ5QGS0 1516 aa10.58□□□□□ -0.72
HDAC3-207ENST00000475549 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-207ENST00000475549 DDX17Q92841 729 aaKnown RBP10.56□□□□□ -0.72
HDAC3-207ENST00000475549 MPHOSPH9Q99550 1183 aa10.56□□□□□ -0.72
HDAC3-207ENST00000475549 RPGRIP1LQ68CZ1 1315 aa10.56□□□□□ -0.72
HDAC3-207ENST00000475549 SPHKAPQ2M3C7 1700 aa10.55□□□□□ -0.72
HDAC3-207ENST00000475549 ROBO2Q9HCK4 1378 aa10.55□□□□□ -0.72
HDAC3-207ENST00000475549 MST1RQ04912 1400 aa10.55□□□□□ -0.72
HDAC3-207ENST00000475549 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-207ENST00000475549 ADGRF5Q8IZF2 1346 aa10.55□□□□□ -0.72
HDAC3-207ENST00000475549 COL16A1Q07092 1604 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-207ENST00000475549 DCCP43146 1447 aa10.54□□□□□ -0.72
HDAC3-207ENST00000475549 LRP6O75581 1613 aa10.54□□□□□ -0.72
HDAC3-207ENST00000475549 SPATA31A6Q5VVP1 1343 aa10.54□□□□□ -0.72
HDAC3-207ENST00000475549 XRN1Q8IZH2 1706 aaKnown RBP10.53□□□□□ -0.72
HDAC3-207ENST00000475549 RGL3Q3MIN7 710 aa10.53□□□□□ -0.72
HDAC3-207ENST00000475549 ADGRL3Q9HAR2 1447 aa10.52□□□□□ -0.73
HDAC3-207ENST00000475549 ORAI2Q96SN7 254 aa10.52□□□□□ -0.73
HDAC3-207ENST00000475549 AHDC1Q5TGY3 1603 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-207ENST00000475549 SPATA31E1Q6ZUB1 1445 aa10.51□□□□□ -0.73
HDAC3-207ENST00000475549 PHLPP1O60346 1717 aa10.51□□□□□ -0.73
HDAC3-207ENST00000475549 ASXL1Q8IXJ9 1541 aa10.51□□□□□ -0.73
HDAC3-207ENST00000475549 SETD5Q9C0A6 1442 aa10.5□□□□□ -0.73
HDAC3-207ENST00000475549 NUTM2BA6NNL0 878 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-207ENST00000475549 NUTM2EB1AL46 878 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-207ENST00000475549 NUTM2AQ8IVF1 878 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-207ENST00000475549 PTCH1Q13635 1447 aa10.5□□□□□ -0.73
HDAC3-207ENST00000475549 C1orf167Q5SNV9 1468 aa10.49□□□□□ -0.73
HDAC3-207ENST00000475549 TMEM132EQ6IEE7 984 aa10.49□□□□□ -0.73
HDAC3-207ENST00000475549 WAPLQ7Z5K2 1190 aa10.49□□□□□ -0.73
HDAC3-207ENST00000475549 LRRC59Q96AG4 307 aaKnown RBP10.49□□□□□ -0.73
HDAC3-207ENST00000475549 CCDC144AA2RUR9 1427 aa10.49□□□□□ -0.73
HDAC3-207ENST00000475549 PRAG1Q86YV5 1406 aa10.49□□□□□ -0.73
HDAC3-207ENST00000475549 MEX3CQ5U5Q3 659 aaKnown RBP10.48□□□□□ -0.73
HDAC3-207ENST00000475549 STK26Q9P289 416 aa10.48□□□□□ -0.73
HDAC3-207ENST00000475549 ZNF772Q68DY9 489 aaPredicted RBP10.47□□□□□ -0.73
HDAC3-207ENST00000475549 SOS2Q07890 1332 aaPredicted RBP10.47□□□□□ -0.73
HDAC3-207ENST00000475549 C14orf93Q9H972 538 aaKnown RBP10.46□□□□□ -0.73
HDAC3-207ENST00000475549 PNPLA6Q8IY17 1366 aa10.46□□□□□ -0.74
HDAC3-207ENST00000475549 PLEKHH1Q9ULM0 1364 aa10.46□□□□□ -0.74
HDAC3-207ENST00000475549 SETD1AO15047 1707 aaKnown RBP10.45□□□□□ -0.74
HDAC3-207ENST00000475549 ABCC11Q96J66 1382 aa10.45□□□□□ -0.74
HDAC3-207ENST00000475549 ANKRD30BQ9BXX2 1392 aa10.45□□□□□ -0.74
HDAC3-207ENST00000475549 TECPR2O15040 1411 aa10.44□□□□□ -0.74
HDAC3-207ENST00000475549 PIK3C2GO75747 1445 aa10.44□□□□□ -0.74
HDAC3-207ENST00000475549 LRPPRCP42704 1394 aaKnown RBP10.44□□□□□ -0.74
HDAC3-207ENST00000475549 RAB3GAP2Q9H2M9 1393 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms