RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 POTEDQ86YR6 584 aa10.75□□□□□ -0.69
LSAMP-204ENST00000475403 NUTM2AQ8IVF1 878 aaPredicted RBP10.75□□□□□ -0.69
LSAMP-204ENST00000475403 SHPRHQ149N8 1683 aa10.75□□□□□ -0.69
LSAMP-204ENST00000475403 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.74□□□□□ -0.69
LSAMP-204ENST00000475403 KANK1Q14678 1352 aa10.74□□□□□ -0.69
LSAMP-204ENST00000475403 TET3O43151 1660 aa10.73□□□□□ -0.69
LSAMP-204ENST00000475403 PPP1R15AO75807 674 aaPredicted RBP10.73□□□□□ -0.69
LSAMP-204ENST00000475403 NUTM2DQ5VT03 806 aaPredicted RBP10.73□□□□□ -0.69
LSAMP-204ENST00000475403 ADGRB3O60242 1522 aa10.73□□□□□ -0.69
LSAMP-204ENST00000475403 ATF3P18847 181 aa10.72□□□□□ -0.69
LSAMP-204ENST00000475403 AFF2P51816 1311 aa10.72□□□□□ -0.69
LSAMP-204ENST00000475403 AHDC1Q5TGY3 1603 aaPredicted RBP10.72□□□□□ -0.69
LSAMP-204ENST00000475403 HRCP23327 699 aa10.71□□□□□ -0.69
LSAMP-204ENST00000475403 CADPS2Q86UW7 1296 aa10.71□□□□□ -0.69
LSAMP-204ENST00000475403 ERBINQ96RT1 1412 aa10.71□□□□□ -0.69
LSAMP-204ENST00000475403 KIF15Q9NS87 1388 aa10.71□□□□□ -0.69
LSAMP-204ENST00000475403 RGS12O14924 1447 aa10.7□□□□□ -0.7
LSAMP-204ENST00000475403 IDI1Q13907 227 aa10.7□□□□□ -0.7
LSAMP-204ENST00000475403 ZRANB1Q9UGI0 708 aa10.69□□□□□ -0.7
LSAMP-204ENST00000475403 ATAD2Q6PL18 1390 aa10.68□□□□□ -0.7
LSAMP-204ENST00000475403 CHD2O14647 1828 aaKnown RBP10.68□□□□□ -0.7
LSAMP-204ENST00000475403 HDGFP51858 240 aaKnown RBP10.68□□□□□ -0.7
LSAMP-204ENST00000475403 C8orf37Q96NL8 207 aa10.68□□□□□ -0.7
LSAMP-204ENST00000475403 RRP7BPQ9NSQ0 103 aa10.68□□□□□ -0.7
LSAMP-204ENST00000475403 MYOM3Q5VTT5 1437 aa10.67□□□□□ -0.7
LSAMP-204ENST00000475403 NCOA3Q9Y6Q9 1424 aa10.67□□□□□ -0.7
LSAMP-204ENST00000475403 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.67□□□□□ -0.7
LSAMP-204ENST00000475403 RBM6P78332 1123 aaKnown RBP10.67□□□□□ -0.7
LSAMP-204ENST00000475403 PLEKHG1Q9ULL1 1385 aa10.66□□□□□ -0.7
LSAMP-204ENST00000475403 NGLY1Q96IV0 654 aa10.66□□□□□ -0.7
LSAMP-204ENST00000475403 C19orf44Q9H6X5 657 aa10.66□□□□□ -0.7
LSAMP-204ENST00000475403 QTRT2Q9H974 415 aaKnown RBP10.66□□□□□ -0.7
LSAMP-204ENST00000475403 SLC52A1Q9NWF4 448 aa10.65□□□□□ -0.7
LSAMP-204ENST00000475403 CROCC2H7BZ55 1655 aa10.65□□□□□ -0.7
LSAMP-204ENST00000475403 DIP2AQ14689 1571 aa10.65□□□□□ -0.71
LSAMP-204ENST00000475403 LMTK2Q8IWU2 1503 aa10.64□□□□□ -0.71
LSAMP-204ENST00000475403 BRINP3Q76B58 766 aa10.64□□□□□ -0.71
LSAMP-204ENST00000475403 RIMS2Q9UQ26 1411 aa10.64□□□□□ -0.71
LSAMP-204ENST00000475403 ASXL1Q8IXJ9 1541 aa10.63□□□□□ -0.71
LSAMP-204ENST00000475403 GCC2Q8IWJ2 1684 aa10.63□□□□□ -0.71
LSAMP-204ENST00000475403 MYO5BQ9ULV0 1848 aa10.63□□□□□ -0.71
LSAMP-204ENST00000475403 ZFYVE9O95405 1425 aa10.62□□□□□ -0.71
LSAMP-204ENST00000475403 NOS1P29475 1434 aa10.62□□□□□ -0.71
LSAMP-204ENST00000475403 CHGAP10645 457 aaKnown RBP10.62□□□□□ -0.71
LSAMP-204ENST00000475403 LRRC59Q96AG4 307 aaKnown RBP10.62□□□□□ -0.71
LSAMP-204ENST00000475403 SETBP1Q9Y6X0 1596 aa10.61□□□□□ -0.71
LSAMP-204ENST00000475403 SETD5Q9C0A6 1442 aa10.61□□□□□ -0.71
LSAMP-204ENST00000475403 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.61□□□□□ -0.71
LSAMP-204ENST00000475403 TBX22Q9Y458 520 aa10.61□□□□□ -0.71
LSAMP-204ENST00000475403 DCCP43146 1447 aa10.6□□□□□ -0.71
LSAMP-204ENST00000475403 TRPM2O94759 1503 aa10.6□□□□□ -0.71
LSAMP-204ENST00000475403 NHSL1Q5SYE7 1610 aa10.6□□□□□ -0.71
LSAMP-204ENST00000475403 ADAMTS2O95450 1211 aa10.6□□□□□ -0.71
LSAMP-204ENST00000475403 PIK3R4Q99570 1358 aa10.59□□□□□ -0.71
LSAMP-204ENST00000475403 ANKRD30AQ9BXX3 1397 aa10.59□□□□□ -0.71
LSAMP-204ENST00000475403 RPRD2Q5VT52 1461 aaKnown RBP10.59□□□□□ -0.71
LSAMP-204ENST00000475403 ABCC5O15440 1437 aa10.58□□□□□ -0.72
LSAMP-204ENST00000475403 PNPLA6Q8IY17 1366 aa10.58□□□□□ -0.72
LSAMP-204ENST00000475403 USP21Q9UK80 565 aa10.58□□□□□ -0.72
LSAMP-204ENST00000475403 TRPC5Q9UL62 973 aaPredicted RBP10.58□□□□□ -0.72
LSAMP-204ENST00000475403 PTPN23Q9H3S7 1636 aa10.58□□□□□ -0.72
LSAMP-204ENST00000475403 DAPK1P53355 1430 aa10.58□□□□□ -0.72
LSAMP-204ENST00000475403 CHIC2Q9UKJ5 165 aa10.57□□□□□ -0.72
LSAMP-204ENST00000475403 AMOTL2Q9Y2J4 779 aa10.57□□□□□ -0.72
LSAMP-204ENST00000475403 TMEM131LA2VDJ0 1609 aa10.57□□□□□ -0.72
LSAMP-204ENST00000475403 ADAMTS13Q76LX8 1427 aa10.57□□□□□ -0.72
LSAMP-204ENST00000475403 EP400Q96L91 3159 aa10.56□□□□□ -0.72
LSAMP-204ENST00000475403 CCDC125Q86Z20 511 aa10.56□□□□□ -0.72
LSAMP-204ENST00000475403 MST1RQ04912 1400 aa10.56□□□□□ -0.72
LSAMP-204ENST00000475403 VPS8Q8N3P4 1428 aa10.54□□□□□ -0.72
LSAMP-204ENST00000475403 DDX17Q92841 729 aaKnown RBP10.54□□□□□ -0.72
LSAMP-204ENST00000475403 SF3B2Q13435 895 aaKnown RBP10.53□□□□□ -0.72
LSAMP-204ENST00000475403 KANK4Q5T7N3 995 aaPredicted RBP10.53□□□□□ -0.72
LSAMP-204ENST00000475403 UNC13BO14795 1591 aa10.52□□□□□ -0.73
LSAMP-204ENST00000475403 ATRNO75882 1429 aa10.51□□□□□ -0.73
LSAMP-204ENST00000475403 PTCH1Q13635 1447 aa10.51□□□□□ -0.73
LSAMP-204ENST00000475403 PTPRUQ92729 1446 aa10.51□□□□□ -0.73
LSAMP-204ENST00000475403 XRN1Q8IZH2 1706 aaKnown RBP10.51□□□□□ -0.73
LSAMP-204ENST00000475403 LRP5O75197 1615 aa10.51□□□□□ -0.73
LSAMP-204ENST00000475403 ADGRL3Q9HAR2 1447 aa10.5□□□□□ -0.73
LSAMP-204ENST00000475403 BLMP54132 1417 aaPredicted RBP10.5□□□□□ -0.73
LSAMP-204ENST00000475403 ANKRD50Q9ULJ7 1429 aa10.5□□□□□ -0.73
LSAMP-204ENST00000475403 APLP2Q06481 763 aa10.49□□□□□ -0.73
LSAMP-204ENST00000475403 FNBP4Q8N3X1 1017 aaPredicted RBP10.49□□□□□ -0.73
LSAMP-204ENST00000475403 NALCNQ8IZF0 1738 aa10.49□□□□□ -0.73
LSAMP-204ENST00000475403 C1orf167Q5SNV9 1468 aa10.48□□□□□ -0.73
LSAMP-204ENST00000475403 ZNF326Q5BKZ1 582 aaKnown RBP10.47□□□□□ -0.73
LSAMP-204ENST00000475403 DEFB132Q7Z7B7 95 aa10.46□□□□□ -0.73
LSAMP-204ENST00000475403 ADGRL2O95490 1459 aa10.46□□□□□ -0.74
LSAMP-204ENST00000475403 NRXN3Q9Y4C0 1643 aa10.46□□□□□ -0.74
LSAMP-204ENST00000475403 E9PCH4 1651 aa10.46□□□□□ -0.74
LSAMP-204ENST00000475403 COL22A1Q8NFW1 1626 aaPredicted RBP10.45□□□□□ -0.74
LSAMP-204ENST00000475403 SOS2Q07890 1332 aaPredicted RBP10.45□□□□□ -0.74
LSAMP-204ENST00000475403 GJD4Q96KN9 370 aaPredicted RBP10.45□□□□□ -0.74
LSAMP-204ENST00000475403 LAMC1P11047 1609 aa10.44□□□□□ -0.74
LSAMP-204ENST00000475403 IQGAP3Q86VI3 1631 aa10.44□□□□□ -0.74
LSAMP-204ENST00000475403 METP08581 1390 aa10.44□□□□□ -0.74
LSAMP-204ENST00000475403 FAM50AQ14320 339 aaKnown RBP10.44□□□□□ -0.74
LSAMP-204ENST00000475403 MARF1Q9Y4F3 1742 aaKnown RBP10.44□□□□□ -0.74
LSAMP-204ENST00000475403 BCL9LQ86UU0 1499 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms