RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 KDM5AP29375 1690 aaKnown RBP22.49■■□□□ 1.19
ATG9A-220ENST00000475339 C14orf37Q86TY3 774 aa22.48■■□□□ 1.19
ATG9A-220ENST00000475339 ZRANB1Q9UGI0 708 aa22.48■■□□□ 1.19
ATG9A-220ENST00000475339 AHDC1Q5TGY3 1603 aaPredicted RBP22.48■■□□□ 1.19
ATG9A-220ENST00000475339 RBM6P78332 1123 aaKnown RBP22.47■■□□□ 1.19
ATG9A-220ENST00000475339 QTRT2Q9H974 415 aaKnown RBP22.47■■□□□ 1.19
ATG9A-220ENST00000475339 MAST1Q9Y2H9 1570 aa22.46■■□□□ 1.19
ATG9A-220ENST00000475339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.46■■□□□ 1.19
ATG9A-220ENST00000475339 CADPS2Q86UW7 1296 aa22.43■■□□□ 1.18
ATG9A-220ENST00000475339 SETBP1Q9Y6X0 1596 aa22.42■■□□□ 1.18
ATG9A-220ENST00000475339 ATF3P18847 181 aa22.42■■□□□ 1.18
ATG9A-220ENST00000475339 C8orf37Q96NL8 207 aa22.42■■□□□ 1.18
ATG9A-220ENST00000475339 DIP2AQ14689 1571 aa22.42■■□□□ 1.18
ATG9A-220ENST00000475339 BRINP3Q76B58 766 aa22.41■■□□□ 1.18
ATG9A-220ENST00000475339 C19orf44Q9H6X5 657 aa22.41■■□□□ 1.18
ATG9A-220ENST00000475339 DUOX2Q9NRD8 1548 aa22.41■■□□□ 1.18
ATG9A-220ENST00000475339 FOXD1Q16676 465 aa22.4■■□□□ 1.18
ATG9A-220ENST00000475339 NCOA3Q9Y6Q9 1424 aa22.4■■□□□ 1.18
ATG9A-220ENST00000475339 CHD2O14647 1828 aaKnown RBP22.39■■□□□ 1.17
ATG9A-220ENST00000475339 ATAD2Q6PL18 1390 aa22.38■■□□□ 1.17
ATG9A-220ENST00000475339 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.36■■□□□ 1.17
ATG9A-220ENST00000475339 ADGRB3O60242 1522 aa22.36■■□□□ 1.17
ATG9A-220ENST00000475339 KIF15Q9NS87 1388 aa22.35■■□□□ 1.17
ATG9A-220ENST00000475339 PLEKHG1Q9ULL1 1385 aa22.35■■□□□ 1.17
ATG9A-220ENST00000475339 PPP1R15AO75807 674 aaPredicted RBP22.34■■□□□ 1.17
ATG9A-220ENST00000475339 NGLY1Q96IV0 654 aa22.34■■□□□ 1.17
ATG9A-220ENST00000475339 RRP7BPQ9NSQ0 103 aa22.34■■□□□ 1.17
ATG9A-220ENST00000475339 TBX22Q9Y458 520 aa22.33■■□□□ 1.17
ATG9A-220ENST00000475339 KANK1Q14678 1352 aa22.33■■□□□ 1.17
ATG9A-220ENST00000475339 SETD5Q9C0A6 1442 aa22.32■■□□□ 1.16
ATG9A-220ENST00000475339 ZFYVE9O95405 1425 aa22.31■■□□□ 1.16
ATG9A-220ENST00000475339 NOS1P29475 1434 aa22.31■■□□□ 1.16
ATG9A-220ENST00000475339 ERBINQ96RT1 1412 aa22.31■■□□□ 1.16
ATG9A-220ENST00000475339 SLC52A1Q9NWF4 448 aa22.31■■□□□ 1.16
ATG9A-220ENST00000475339 LRRC59Q96AG4 307 aaKnown RBP22.3■■□□□ 1.16
ATG9A-220ENST00000475339 ADAMTS2O95450 1211 aa22.28■■□□□ 1.16
ATG9A-220ENST00000475339 RIMS2Q9UQ26 1411 aa22.27■■□□□ 1.16
ATG9A-220ENST00000475339 ASXL1Q8IXJ9 1541 aa22.26■■□□□ 1.15
ATG9A-220ENST00000475339 HDGFP51858 240 aaKnown RBP22.26■■□□□ 1.15
ATG9A-220ENST00000475339 DDX17Q92841 729 aaKnown RBP22.26■■□□□ 1.15
ATG9A-220ENST00000475339 LMTK2Q8IWU2 1503 aa22.26■■□□□ 1.15
ATG9A-220ENST00000475339 PNPLA6Q8IY17 1366 aa22.25■■□□□ 1.15
ATG9A-220ENST00000475339 MYOM3Q5VTT5 1437 aa22.25■■□□□ 1.15
ATG9A-220ENST00000475339 EP400Q96L91 3159 aa22.24■■□□□ 1.15
ATG9A-220ENST00000475339 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
ATG9A-220ENST00000475339 USP21Q9UK80 565 aa22.23■■□□□ 1.15
ATG9A-220ENST00000475339 CCDC125Q86Z20 511 aa22.22■■□□□ 1.15
ATG9A-220ENST00000475339 TRPC5Q9UL62 973 aaPredicted RBP22.21■■□□□ 1.15
ATG9A-220ENST00000475339 AMOTL2Q9Y2J4 779 aa22.21■■□□□ 1.15
ATG9A-220ENST00000475339 PIK3R4Q99570 1358 aa22.19■■□□□ 1.14
ATG9A-220ENST00000475339 ABCC5O15440 1437 aa22.19■■□□□ 1.14
ATG9A-220ENST00000475339 MST1RQ04912 1400 aa22.19■■□□□ 1.14
ATG9A-220ENST00000475339 NHSL1Q5SYE7 1610 aa22.19■■□□□ 1.14
ATG9A-220ENST00000475339 MYO5BQ9ULV0 1848 aa22.19■■□□□ 1.14
ATG9A-220ENST00000475339 DCCP43146 1447 aa22.17■■□□□ 1.14
ATG9A-220ENST00000475339 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.17■■□□□ 1.14
ATG9A-220ENST00000475339 PTPRUQ92729 1446 aa22.16■■□□□ 1.14
ATG9A-220ENST00000475339 CHGAP10645 457 aaKnown RBP22.15■■□□□ 1.14
ATG9A-220ENST00000475339 FNBP4Q8N3X1 1017 aaPredicted RBP22.14■■□□□ 1.13
ATG9A-220ENST00000475339 TMEM131LA2VDJ0 1609 aa22.13■■□□□ 1.13
ATG9A-220ENST00000475339 GCC2Q8IWJ2 1684 aa22.13■■□□□ 1.13
ATG9A-220ENST00000475339 KANK4Q5T7N3 995 aaPredicted RBP22.12■■□□□ 1.13
ATG9A-220ENST00000475339 ATRNO75882 1429 aa22.12■■□□□ 1.13
ATG9A-220ENST00000475339 CHIC2Q9UKJ5 165 aa22.1■■□□□ 1.13
ATG9A-220ENST00000475339 CROCC2H7BZ55 1655 aa22.09■■□□□ 1.13
ATG9A-220ENST00000475339 RPRD2Q5VT52 1461 aaKnown RBP22.09■■□□□ 1.13
ATG9A-220ENST00000475339 TRPM2O94759 1503 aa22.08■■□□□ 1.13
ATG9A-220ENST00000475339 DEFB132Q7Z7B7 95 aa22.08■■□□□ 1.13
ATG9A-220ENST00000475339 DAPK1P53355 1430 aa22.06■■□□□ 1.12
ATG9A-220ENST00000475339 ANKRD30AQ9BXX3 1397 aa22.05■■□□□ 1.12
ATG9A-220ENST00000475339 LRP5O75197 1615 aa22.05■■□□□ 1.12
ATG9A-220ENST00000475339 BLMP54132 1417 aaPredicted RBP22.05■■□□□ 1.12
ATG9A-220ENST00000475339 PTCH1Q13635 1447 aa22.05■■□□□ 1.12
ATG9A-220ENST00000475339 SOS2Q07890 1332 aaPredicted RBP22.02■■□□□ 1.12
ATG9A-220ENST00000475339 LOC105371045A0A1W2PR82 267 aa22.01■■□□□ 1.11
ATG9A-220ENST00000475339 GJD4Q96KN9 370 aaPredicted RBP22.01■■□□□ 1.11
ATG9A-220ENST00000475339 BCL9LQ86UU0 1499 aa22.01■■□□□ 1.11
ATG9A-220ENST00000475339 XRN1Q8IZH2 1706 aaKnown RBP22■■□□□ 1.11
ATG9A-220ENST00000475339 ADGRL3Q9HAR2 1447 aa21.99■■□□□ 1.11
ATG9A-220ENST00000475339 PSDA5PKW4 1024 aaPredicted RBP21.98■■□□□ 1.11
ATG9A-220ENST00000475339 UNC13BO14795 1591 aa21.98■■□□□ 1.11
ATG9A-220ENST00000475339 C1orf167Q5SNV9 1468 aa21.97■■□□□ 1.11
ATG9A-220ENST00000475339 ORAI2Q96SN7 254 aa21.97■■□□□ 1.11
ATG9A-220ENST00000475339 PTPN23Q9H3S7 1636 aa21.97■■□□□ 1.11
ATG9A-220ENST00000475339 SF3B2Q13435 895 aaKnown RBP21.96■■□□□ 1.11
ATG9A-220ENST00000475339 METP08581 1390 aa21.96■■□□□ 1.11
ATG9A-220ENST00000475339 HRCP23327 699 aa21.95■■□□□ 1.1
ATG9A-220ENST00000475339 LAMC1P11047 1609 aa21.93■■□□□ 1.1
ATG9A-220ENST00000475339 NRXN3Q9Y4C0 1643 aa21.91■■□□□ 1.1
ATG9A-220ENST00000475339 VPS8Q8N3P4 1428 aa21.91■■□□□ 1.1
ATG9A-220ENST00000475339 NALCNQ8IZF0 1738 aa21.91■■□□□ 1.1
ATG9A-220ENST00000475339 MYOM2P54296 1465 aa21.9■■□□□ 1.1
ATG9A-220ENST00000475339 ANKRD50Q9ULJ7 1429 aa21.89■■□□□ 1.09
ATG9A-220ENST00000475339 COL22A1Q8NFW1 1626 aaPredicted RBP21.88■■□□□ 1.09
ATG9A-220ENST00000475339 RALGAPBQ86X10 1494 aa21.88■■□□□ 1.09
ATG9A-220ENST00000475339 GLI3P10071 1580 aa21.87■■□□□ 1.09
ATG9A-220ENST00000475339 UNC5CLQ8IV45 518 aa21.86■■□□□ 1.09
ATG9A-220ENST00000475339 YY1P25490 414 aa21.85■■□□□ 1.09
ATG9A-220ENST00000475339 SEPT12Q8IYM1 358 aa21.85■■□□□ 1.09
ATG9A-220ENST00000475339 ADGRL2O95490 1459 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms