RNA–Protein interactions for RNA: ENST00000474830.1

GSK3B-204, Transcript of glycogen synthase kinase 3 beta, humanhuman

TSL 2

Gene GSK3B, Length 518 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3B-204ENST00000474830 NECTIN2Q92692 538 aa10.41□□□□□ -0.74
GSK3B-204ENST00000474830 OATP04181 439 aa10.39□□□□□ -0.75
GSK3B-204ENST00000474830 IL21Q9HBE4 155 aa10.39□□□□□ -0.75
GSK3B-204ENST00000474830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.38□□□□□ -0.75
GSK3B-204ENST00000474830 METTL3Q86U44 580 aaKnown RBP10.38□□□□□ -0.75
GSK3B-204ENST00000474830 SLC4A3P48751 1232 aa10.37□□□□□ -0.75
GSK3B-204ENST00000474830 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
GSK3B-204ENST00000474830 SLC10A3P09131 477 aa10.34□□□□□ -0.75
GSK3B-204ENST00000474830 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
GSK3B-204ENST00000474830 PRR14Q9BWN1 585 aa10.33□□□□□ -0.76
GSK3B-204ENST00000474830 COPS2P61201 443 aa10.31□□□□□ -0.76
GSK3B-204ENST00000474830 PHOX2BQ99453 314 aa10.31□□□□□ -0.76
GSK3B-204ENST00000474830 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
GSK3B-204ENST00000474830 NKX2-3Q8TAU0 364 aa10.3□□□□□ -0.76
GSK3B-204ENST00000474830 PCDHB3Q9Y5E6 796 aa10.3□□□□□ -0.76
GSK3B-204ENST00000474830 ZPR1O75312 459 aa10.29□□□□□ -0.76
GSK3B-204ENST00000474830 PPP1R18Q6NYC8 613 aa10.29□□□□□ -0.76
GSK3B-204ENST00000474830 CFHP08603 1231 aa10.28□□□□□ -0.76
GSK3B-204ENST00000474830 BLOC1S3Q6QNY0 202 aa10.28□□□□□ -0.76
GSK3B-204ENST00000474830 DAXXQ9UER7 740 aaPredicted RBP10.27□□□□□ -0.77
GSK3B-204ENST00000474830 KMT5BQ4FZB7 885 aa10.26□□□□□ -0.77
GSK3B-204ENST00000474830 NLRP7Q8WX94 980 aa10.25□□□□□ -0.77
GSK3B-204ENST00000474830 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.25□□□□□ -0.77
GSK3B-204ENST00000474830 TULP1O00294 542 aaPredicted RBP10.23□□□□□ -0.77
GSK3B-204ENST00000474830 MAP2K5Q13163 448 aa10.23□□□□□ -0.77
GSK3B-204ENST00000474830 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.23□□□□□ -0.77
GSK3B-204ENST00000474830 IRX2Q9BZI1 471 aaPredicted RBP10.23□□□□□ -0.77
GSK3B-204ENST00000474830 RSPH4AQ5TD94 716 aa10.21□□□□□ -0.77
GSK3B-204ENST00000474830 TMUB1Q9BVT8 246 aa10.21□□□□□ -0.77
GSK3B-204ENST00000474830 IRF6O14896 467 aa10.2□□□□□ -0.78
GSK3B-204ENST00000474830 TLL1O43897 1013 aa10.19□□□□□ -0.78
GSK3B-204ENST00000474830 MINK1Q8N4C8 1332 aaPredicted RBP10.18□□□□□ -0.78
GSK3B-204ENST00000474830 DDX11L8A8MPP1 907 aa10.18□□□□□ -0.78
GSK3B-204ENST00000474830 PRKD2Q9BZL6 878 aa10.18□□□□□ -0.78
GSK3B-204ENST00000474830 V9GY48 417 aaPredicted RBP10.18□□□□□ -0.78
GSK3B-204ENST00000474830 NR1I2O75469 434 aa10.17□□□□□ -0.78
GSK3B-204ENST00000474830 GGCXP38435 758 aa10.17□□□□□ -0.78
GSK3B-204ENST00000474830 SCUBE3Q8IX30 993 aa10.17□□□□□ -0.78
GSK3B-204ENST00000474830 GCGRP47871 477 aa10.16□□□□□ -0.78
GSK3B-204ENST00000474830 PUS10Q3MIT2 529 aaKnown RBP10.16□□□□□ -0.78
GSK3B-204ENST00000474830 SULF1Q8IWU6 871 aa10.16□□□□□ -0.78
GSK3B-204ENST00000474830 RDH13Q8NBN7 331 aa10.16□□□□□ -0.78
GSK3B-204ENST00000474830 RNF223E7ERA6 249 aa10.15□□□□□ -0.78
GSK3B-204ENST00000474830 ADH1BP00325 375 aa10.14□□□□□ -0.79
GSK3B-204ENST00000474830 FUT2Q10981 343 aa10.14□□□□□ -0.79
GSK3B-204ENST00000474830 MORN1Q5T089 497 aa10.14□□□□□ -0.79
GSK3B-204ENST00000474830 EMID1Q96A84 441 aaPredicted RBP10.14□□□□□ -0.79
GSK3B-204ENST00000474830 LMOD2Q6P5Q4 547 aa10.13□□□□□ -0.79
GSK3B-204ENST00000474830 CCDC102AQ96A19 550 aa10.13□□□□□ -0.79
GSK3B-204ENST00000474830 S1PR4O95977 384 aa10.12□□□□□ -0.79
GSK3B-204ENST00000474830 ATP6V1AP38606 617 aa10.12□□□□□ -0.79
GSK3B-204ENST00000474830 CD46P15529 392 aa10.11□□□□□ -0.79
GSK3B-204ENST00000474830 THAP11Q96EK4 314 aa10.11□□□□□ -0.79
GSK3B-204ENST00000474830 PPEF1O14829 653 aaPredicted RBP10.1□□□□□ -0.79
GSK3B-204ENST00000474830 ANKLE1Q8NAG6 615 aa10.1□□□□□ -0.79
GSK3B-204ENST00000474830 MDM2Q00987 491 aaPredicted RBP10.09□□□□□ -0.79
GSK3B-204ENST00000474830 SLC27A5Q9Y2P5 690 aa10.09□□□□□ -0.79
GSK3B-204ENST00000474830 SPSB2Q99619 263 aa10.08□□□□□ -0.8
GSK3B-204ENST00000474830 SLC6A16Q9GZN6 736 aa10.08□□□□□ -0.8
GSK3B-204ENST00000474830 ZMYND10O75800 440 aa10.07□□□□□ -0.8
GSK3B-204ENST00000474830 LAPTM4AQ15012 233 aa10.07□□□□□ -0.8
GSK3B-204ENST00000474830 BARGINQ6ZT62 677 aa10.07□□□□□ -0.8
GSK3B-204ENST00000474830 SALL2Q9Y467 1007 aaPredicted RBP10.07□□□□□ -0.8
GSK3B-204ENST00000474830 GFRA3O60609 400 aa10.06□□□□□ -0.8
GSK3B-204ENST00000474830 ZC3H15Q8WU90 426 aaKnown RBP10.06□□□□□ -0.8
GSK3B-204ENST00000474830 SLC19A1P41440 591 aa10.05□□□□□ -0.8
GSK3B-204ENST00000474830 BRICD5Q6PL45 260 aa10.05□□□□□ -0.8
GSK3B-204ENST00000474830 PLA2G2CQ5R387 149 aa10.04□□□□□ -0.8
GSK3B-204ENST00000474830 LIAT1Q6ZQX7 453 aa10.04□□□□□ -0.8
GSK3B-204ENST00000474830 FAM160A2Q8N612 972 aaPredicted RBP10.04□□□□□ -0.8
GSK3B-204ENST00000474830 GPCPD1Q9NPB8 672 aa10.04□□□□□ -0.8
GSK3B-204ENST00000474830 LCE2BO14633 110 aa10.03□□□□□ -0.8
GSK3B-204ENST00000474830 SPRYD7Q5W111 196 aa10.03□□□□□ -0.8
GSK3B-204ENST00000474830 Q6ZNB5 142 aa10.03□□□□□ -0.8
GSK3B-204ENST00000474830 REPIN1Q9BWE0 567 aaKnown RBP10.03□□□□□ -0.8
GSK3B-204ENST00000474830 FAM217BQ9NTX9 383 aaPredicted RBP10.03□□□□□ -0.8
GSK3B-204ENST00000474830 NRG2O14511 850 aaPredicted RBP10.02□□□□□ -0.81
GSK3B-204ENST00000474830 KDM4AO75164 1064 aa10.02□□□□□ -0.81
GSK3B-204ENST00000474830 FMNL1O95466 1100 aaPredicted RBP10.02□□□□□ -0.81
GSK3B-204ENST00000474830 CLCN1P35523 988 aa10.02□□□□□ -0.81
GSK3B-204ENST00000474830 GRIPAP1Q4V328 841 aa10.02□□□□□ -0.81
GSK3B-204ENST00000474830 TRIM67Q6ZTA4 783 aa10.02□□□□□ -0.81
GSK3B-204ENST00000474830 RNF19BQ6ZMZ0 732 aa10.01□□□□□ -0.81
GSK3B-204ENST00000474830 ZNF598Q86UK7 904 aaKnown RBP10□□□□□ -0.81
GSK3B-204ENST00000474830 KRI1Q8N9T8 703 aaKnown RBP9.99□□□□□ -0.81
GSK3B-204ENST00000474830 PDZRN3Q9UPQ7 1066 aa9.99□□□□□ -0.81
GSK3B-204ENST00000474830 USP46P62068 366 aa9.98□□□□□ -0.81
GSK3B-204ENST00000474830 AMHR2Q16671 573 aa9.98□□□□□ -0.81
GSK3B-204ENST00000474830 MSS51Q4VC12 460 aa9.98□□□□□ -0.81
GSK3B-204ENST00000474830 PRDM9Q9NQV7 894 aa9.98□□□□□ -0.81
GSK3B-204ENST00000474830 HOXA2O43364 376 aa9.97□□□□□ -0.81
GSK3B-204ENST00000474830 HLA-CQ95604 372 aa9.97□□□□□ -0.81
GSK3B-204ENST00000474830 Q3C1V9 767 aa9.96□□□□□ -0.82
GSK3B-204ENST00000474830 PRR20EP86478 221 aa9.95□□□□□ -0.82
GSK3B-204ENST00000474830 PRR20CP86479 221 aa9.95□□□□□ -0.82
GSK3B-204ENST00000474830 PRR20DP86480 221 aa9.95□□□□□ -0.82
GSK3B-204ENST00000474830 PRR20BP86481 221 aa9.95□□□□□ -0.82
GSK3B-204ENST00000474830 PRR20AP86496 221 aa9.95□□□□□ -0.82
GSK3B-204ENST00000474830 FCF1Q9Y324 198 aaKnown RBP9.95□□□□□ -0.82
GSK3B-204ENST00000474830 GDF9O60383 454 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms