RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, human

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-222	ENST00000474742	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	2.84	□□□□□ -1.95
HDAC9-222	ENST00000474742	RBM27	Q9P2N5	1060 aa	Known RBP	2.84	□□□□□ -1.95
HDAC9-222	ENST00000474742	POTEC	B2RU33	542 aa		2.83	□□□□□ -1.96
HDAC9-222	ENST00000474742	C11orf95	C9JLR9	678 aa	Predicted RBP	2.83	□□□□□ -1.96
HDAC9-222	ENST00000474742	PPEF1	O14829	653 aa	Predicted RBP	2.83	□□□□□ -1.96
HDAC9-222	ENST00000474742	ST8SIA5	O15466	376 aa		2.83	□□□□□ -1.96
HDAC9-222	ENST00000474742	TLL1	O43897	1013 aa		2.83	□□□□□ -1.96
HDAC9-222	ENST00000474742	NR1I2	O75469	434 aa		2.83	□□□□□ -1.96
HDAC9-222	ENST00000474742	S1PR4	O95977	384 aa		2.83	□□□□□ -1.96
HDAC9-222	ENST00000474742	OSBP	P22059	807 aa		2.83	□□□□□ -1.96
HDAC9-222	ENST00000474742	RSPH4A	Q5TD94	716 aa		2.83	□□□□□ -1.96
HDAC9-222	ENST00000474742	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	2.83	□□□□□ -1.96
HDAC9-222	ENST00000474742	SPRYD3	Q8NCJ5	442 aa		2.83	□□□□□ -1.96
HDAC9-222	ENST00000474742	RBM46	Q8TBY0	533 aa	Known RBP	2.83	□□□□□ -1.96
HDAC9-222	ENST00000474742	ADH1B	P00325	375 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	CFH	P08603	1231 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	DNAJB2	P25686	324 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	PRIM1	P49642	420 aa	Known RBP	2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	PRR20E	P86478	221 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	PRR20C	P86479	221 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	PRR20D	P86480	221 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	PRR20B	P86481	221 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	PRR20A	P86496	221 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	TREML4	Q6UXN2	200 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	TRIM67	Q6ZTA4	783 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	CFAP44	Q96MT7	982 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	SLC6A16	Q9GZN6	736 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	TSHZ2	Q9NRE2	1034 aa		2.82	□□□□□ -1.96
HDAC9-222	ENST00000474742	NUTM2F	A1L443	756 aa		2.81	□□□□□ -1.96
HDAC9-222	ENST00000474742	WFS1	O76024	890 aa		2.81	□□□□□ -1.96
HDAC9-222	ENST00000474742	CD2BP2	O95400	341 aa	Known RBP	2.81	□□□□□ -1.96
HDAC9-222	ENST00000474742	LIAT1	Q6ZQX7	453 aa		2.81	□□□□□ -1.96
HDAC9-222	ENST00000474742	CYP4X1	Q8N118	509 aa		2.81	□□□□□ -1.96
HDAC9-222	ENST00000474742	TTC24	A2A3L6	582 aa	Predicted RBP	2.8	□□□□□ -1.96
HDAC9-222	ENST00000474742	AXIN1	O15169	862 aa		2.8	□□□□□ -1.96
HDAC9-222	ENST00000474742	ZBTB24	O43167	697 aa	Predicted RBP	2.8	□□□□□ -1.96
HDAC9-222	ENST00000474742	ACTN4	O43707	911 aa	Known RBP	2.8	□□□□□ -1.96
HDAC9-222	ENST00000474742	PLCB2	Q00722	1185 aa		2.8	□□□□□ -1.96
HDAC9-222	ENST00000474742	INSM1	Q01101	510 aa	Predicted RBP	2.8	□□□□□ -1.96
HDAC9-222	ENST00000474742	EYA1	Q99502	592 aa		2.8	□□□□□ -1.96
HDAC9-222	ENST00000474742	AAAS	Q9NRG9	546 aa		2.8	□□□□□ -1.96
HDAC9-222	ENST00000474742	RCCD1	A6NED2	376 aa		2.79	□□□□□ -1.96
HDAC9-222	ENST00000474742	GDF9	O60383	454 aa		2.79	□□□□□ -1.96
HDAC9-222	ENST00000474742	LMOD2	Q6P5Q4	547 aa		2.79	□□□□□ -1.96
HDAC9-222	ENST00000474742	TTC13	Q8NBP0	860 aa		2.79	□□□□□ -1.96
HDAC9-222	ENST00000474742	SPSB2	Q99619	263 aa		2.79	□□□□□ -1.96
HDAC9-222	ENST00000474742	STK17A	Q9UEE5	414 aa		2.79	□□□□□ -1.96
HDAC9-222	ENST00000474742	FAM181B	A6NEQ2	426 aa		2.78	□□□□□ -1.96
HDAC9-222	ENST00000474742	FAM161A	Q3B820	660 aa		2.78	□□□□□ -1.96
HDAC9-222	ENST00000474742	PUS10	Q3MIT2	529 aa	Known RBP	2.78	□□□□□ -1.96
HDAC9-222	ENST00000474742	SCUBE3	Q8IX30	993 aa		2.78	□□□□□ -1.96
HDAC9-222	ENST00000474742	RDH13	Q8NBN7	331 aa		2.78	□□□□□ -1.96
HDAC9-222	ENST00000474742	EMID1	Q96A84	441 aa	Predicted RBP	2.78	□□□□□ -1.96
HDAC9-222	ENST00000474742	TMEM134	Q9H6X4	195 aa		2.78	□□□□□ -1.96
HDAC9-222	ENST00000474742	NPDC1	Q9NQX5	325 aa	Predicted RBP	2.78	□□□□□ -1.96
HDAC9-222	ENST00000474742	GMPR2	Q9P2T1	348 aa	Known RBP	2.78	□□□□□ -1.96
HDAC9-222	ENST00000474742	KDM2A	Q9Y2K7	1162 aa		2.78	□□□□□ -1.96
HDAC9-222	ENST00000474742	ARIH1	Q9Y4X5	557 aa	Predicted RBP	2.78	□□□□□ -1.96
HDAC9-222	ENST00000474742	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	2.77	□□□□□ -1.97
HDAC9-222	ENST00000474742	RPIA	P49247	311 aa		2.77	□□□□□ -1.97
HDAC9-222	ENST00000474742	CTC1	Q2NKJ3	1217 aa		2.77	□□□□□ -1.97
HDAC9-222	ENST00000474742	DACH1	Q9UI36	760 aa		2.77	□□□□□ -1.97
HDAC9-222	ENST00000474742	FCF1	Q9Y324	198 aa	Known RBP	2.77	□□□□□ -1.97
HDAC9-222	ENST00000474742	ADGRG1	Q9Y653	693 aa		2.77	□□□□□ -1.97
HDAC9-222	ENST00000474742	FMNL1	O95466	1100 aa	Predicted RBP	2.76	□□□□□ -1.97
HDAC9-222	ENST00000474742	OAT	P04181	439 aa		2.76	□□□□□ -1.97
HDAC9-222	ENST00000474742	PTGDR	Q13258	359 aa		2.76	□□□□□ -1.97
HDAC9-222	ENST00000474742	PLA2G2C	Q5R387	149 aa		2.76	□□□□□ -1.97
HDAC9-222	ENST00000474742	PKD2L1	Q9P0L9	805 aa		2.76	□□□□□ -1.97
HDAC9-222	ENST00000474742	FCHSD2	O94868	740 aa		2.75	□□□□□ -1.97
HDAC9-222	ENST00000474742	SLC10A3	P09131	477 aa		2.75	□□□□□ -1.97
HDAC9-222	ENST00000474742	MLLT3	P42568	568 aa	Predicted RBP	2.75	□□□□□ -1.97
HDAC9-222	ENST00000474742	CRIPAK	Q8N1N5	446 aa		2.75	□□□□□ -1.97
HDAC9-222	ENST00000474742	SLC16A10	Q8TF71	515 aa		2.75	□□□□□ -1.97
HDAC9-222	ENST00000474742	SENP2	Q9HC62	589 aa		2.75	□□□□□ -1.97
HDAC9-222	ENST00000474742	DDX11L8	A8MPP1	907 aa		2.74	□□□□□ -1.97
HDAC9-222	ENST00000474742	TERT	O14746	1132 aa	Known RBP	2.74	□□□□□ -1.97
HDAC9-222	ENST00000474742	AVP	P01185	164 aa		2.74	□□□□□ -1.97
HDAC9-222	ENST00000474742	FECH	P22830	423 aa		2.74	□□□□□ -1.97
HDAC9-222	ENST00000474742	ATP6V1A	P38606	617 aa		2.74	□□□□□ -1.97
HDAC9-222	ENST00000474742	NFX1	Q12986	1120 aa	Known RBP	2.74	□□□□□ -1.97
HDAC9-222	ENST00000474742	GRIPAP1	Q4V328	841 aa		2.74	□□□□□ -1.97
HDAC9-222	ENST00000474742	ARHGEF1	Q92888	912 aa	Known RBP	2.74	□□□□□ -1.97
HDAC9-222	ENST00000474742	KIFC2	Q96AC6	838 aa		2.74	□□□□□ -1.97
HDAC9-222	ENST00000474742	TOR4A	Q9NXH8	423 aa		2.74	□□□□□ -1.97
HDAC9-222	ENST00000474742	WIPF1	O43516	503 aa		2.73	□□□□□ -1.97
HDAC9-222	ENST00000474742	SNRPB	P14678	240 aa	Known RBP	2.73	□□□□□ -1.97
HDAC9-222	ENST00000474742	HAP1	P54257	671 aa	Predicted RBP	2.73	□□□□□ -1.97
HDAC9-222	ENST00000474742	SULF1	Q8IWU6	871 aa		2.73	□□□□□ -1.97
HDAC9-222	ENST00000474742	CCDC24	Q8N4L8	307 aa		2.73	□□□□□ -1.97
HDAC9-222	ENST00000474742	SNIP1	Q8TAD8	396 aa	Known RBP	2.73	□□□□□ -1.97
HDAC9-222	ENST00000474742	ATP13A2	Q9NQ11	1180 aa		2.73	□□□□□ -1.97
HDAC9-222	ENST00000474742	WNT7A	O00755	349 aa		2.72	□□□□□ -1.97
HDAC9-222	ENST00000474742	SMCP	P49901	116 aa	Predicted RBP	2.72	□□□□□ -1.97
HDAC9-222	ENST00000474742	FUT2	Q10981	343 aa		2.72	□□□□□ -1.97
HDAC9-222	ENST00000474742		Q3C1V9	767 aa		2.72	□□□□□ -1.97
HDAC9-222	ENST00000474742	MORN1	Q5T089	497 aa		2.72	□□□□□ -1.97
HDAC9-222	ENST00000474742	LCE2A	Q5TA79	106 aa	Predicted RBP	2.72	□□□□□ -1.97
HDAC9-222	ENST00000474742	KCNV2	Q8TDN2	545 aa		2.72	□□□□□ -1.97
HDAC9-222	ENST00000474742	PXYLP1	Q8TE99	480 aa		2.72	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms