RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 ST20-MTHFSA0A0A6YYL1 179 aa27.6■■■□□ 2.01
SSR1-204ENST00000474597 KIF7Q2M1P5 1343 aa27.58■■■□□ 2.01
SSR1-204ENST00000474597 IDI1Q13907 227 aa27.57■■■□□ 2
SSR1-204ENST00000474597 FBXO31Q5XUX0 539 aaPredicted RBP27.57■■■□□ 2
SSR1-204ENST00000474597 ADGRF5Q8IZF2 1346 aa27.55■■■□□ 2
SSR1-204ENST00000474597 ANP32CO43423 234 aa27.54■■■□□ 2
SSR1-204ENST00000474597 NRXN1Q9ULB1 1477 aa27.53■■■□□ 2
SSR1-204ENST00000474597 SPATA31D1Q6ZQQ2 1576 aa27.52■■■□□ 2
SSR1-204ENST00000474597 MYO5BQ9ULV0 1848 aa27.51■■□□□ 1.99
SSR1-204ENST00000474597 ZMYM3Q14202 1370 aa27.51■■□□□ 1.99
SSR1-204ENST00000474597 IQGAP1P46940 1657 aa27.5■■□□□ 1.99
SSR1-204ENST00000474597 POLR3GLQ9BT43 218 aa27.5■■□□□ 1.99
SSR1-204ENST00000474597 TMEM131LA2VDJ0 1609 aa27.5■■□□□ 1.99
SSR1-204ENST00000474597 NEXMIFQ5QGS0 1516 aa27.48■■□□□ 1.99
SSR1-204ENST00000474597 CFAP70Q5T0N1 1121 aa27.48■■□□□ 1.99
SSR1-204ENST00000474597 STAG3Q9UJ98 1225 aa27.48■■□□□ 1.99
SSR1-204ENST00000474597 SCAF11Q99590 1463 aaKnown RBP27.47■■□□□ 1.99
SSR1-204ENST00000474597 VGFO15240 615 aaPredicted RBP27.47■■□□□ 1.99
SSR1-204ENST00000474597 PIK3C2GO75747 1445 aa27.44■■□□□ 1.98
SSR1-204ENST00000474597 EIF3AQ14152 1382 aaKnown RBP27.44■■□□□ 1.98
SSR1-204ENST00000474597 SETBP1Q9Y6X0 1596 aa27.41■■□□□ 1.98
SSR1-204ENST00000474597 NUTM2DQ5VT03 806 aaPredicted RBP27.39■■□□□ 1.98
SSR1-204ENST00000474597 TMF1P82094 1093 aa27.38■■□□□ 1.97
SSR1-204ENST00000474597 TESK2Q96S53 571 aa27.38■■□□□ 1.97
SSR1-204ENST00000474597 C14orf93Q9H972 538 aaKnown RBP27.38■■□□□ 1.97
SSR1-204ENST00000474597 ZFYVE9O95405 1425 aa27.38■■□□□ 1.97
SSR1-204ENST00000474597 FER1L4A9Z1Z3 1794 aa27.38■■□□□ 1.97
SSR1-204ENST00000474597 YTHDC1Q96MU7 727 aaKnown RBP27.37■■□□□ 1.97
SSR1-204ENST00000474597 TNRQ92752 1358 aa27.35■■□□□ 1.97
SSR1-204ENST00000474597 A2ML1A8K2U0 1454 aa27.33■■□□□ 1.97
SSR1-204ENST00000474597 CCER2I3L3R5 266 aa27.32■■□□□ 1.96
SSR1-204ENST00000474597 DISP3Q9P2K9 1392 aa27.31■■□□□ 1.96
SSR1-204ENST00000474597 SLC24A1O60721 1099 aa27.29■■□□□ 1.96
SSR1-204ENST00000474597 ADGRB1O14514 1584 aa27.29■■□□□ 1.96
SSR1-204ENST00000474597 C3P01024 1663 aa27.29■■□□□ 1.96
SSR1-204ENST00000474597 CENPBP07199 599 aaPredicted RBP27.28■■□□□ 1.96
SSR1-204ENST00000474597 CDCA8Q53HL2 280 aa27.27■■□□□ 1.96
SSR1-204ENST00000474597 RIMS2Q9UQ26 1411 aa27.26■■□□□ 1.95
SSR1-204ENST00000474597 MYO3AQ8NEV4 1616 aa27.26■■□□□ 1.95
SSR1-204ENST00000474597 KDM5AP29375 1690 aaKnown RBP27.25■■□□□ 1.95
SSR1-204ENST00000474597 TMEM132EQ6IEE7 984 aa27.25■■□□□ 1.95
SSR1-204ENST00000474597 TRAK1Q9UPV9 953 aa27.24■■□□□ 1.95
SSR1-204ENST00000474597 CEBPAP49715 358 aaPredicted RBP27.23■■□□□ 1.95
SSR1-204ENST00000474597 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.22■■□□□ 1.95
SSR1-204ENST00000474597 CENPJQ9HC77 1338 aaPredicted RBP27.21■■□□□ 1.95
SSR1-204ENST00000474597 NLRP1Q9C000 1473 aa27.21■■□□□ 1.95
SSR1-204ENST00000474597 HDGFP51858 240 aaKnown RBP27.21■■□□□ 1.95
SSR1-204ENST00000474597 PRKRIP1Q9H875 184 aaPredicted RBP27.21■■□□□ 1.95
SSR1-204ENST00000474597 UBR1Q8IWV7 1749 aa27.21■■□□□ 1.95
SSR1-204ENST00000474597 PLPPR3Q6T4P5 718 aa27.2■■□□□ 1.94
SSR1-204ENST00000474597 SENP3Q9H4L4 574 aaPredicted RBP27.2■■□□□ 1.94
SSR1-204ENST00000474597 QRICH2Q9H0J4 1663 aa27.18■■□□□ 1.94
SSR1-204ENST00000474597 ALKQ9UM73 1620 aa27.17■■□□□ 1.94
SSR1-204ENST00000474597 SBNO2Q9Y2G9 1366 aa27.17■■□□□ 1.94
SSR1-204ENST00000474597 ARHGEF28Q8N1W1 1705 aaKnown RBP27.16■■□□□ 1.94
SSR1-204ENST00000474597 RIMS1Q86UR5 1692 aaKnown RBP27.14■■□□□ 1.94
SSR1-204ENST00000474597 ASXL1Q8IXJ9 1541 aa27.14■■□□□ 1.93
SSR1-204ENST00000474597 TMEM2Q9UHN6 1383 aa27.11■■□□□ 1.93
SSR1-204ENST00000474597 CNGB1Q14028 1251 aaPredicted RBP27.11■■□□□ 1.93
SSR1-204ENST00000474597 STK26Q9P289 416 aa27.1■■□□□ 1.93
SSR1-204ENST00000474597 PANK3Q9H999 370 aa27.09■■□□□ 1.93
SSR1-204ENST00000474597 YTHDC2Q9H6S0 1430 aaKnown RBP27.09■■□□□ 1.93
SSR1-204ENST00000474597 ADAMTSL3P82987 1691 aa27.07■■□□□ 1.92
SSR1-204ENST00000474597 SETD1AO15047 1707 aaKnown RBP27.06■■□□□ 1.92
SSR1-204ENST00000474597 BCANQ96GW7 911 aa27.06■■□□□ 1.92
SSR1-204ENST00000474597 MYOM1P52179 1685 aa27.05■■□□□ 1.92
SSR1-204ENST00000474597 NRXN3Q9Y4C0 1643 aa27.05■■□□□ 1.92
SSR1-204ENST00000474597 KTN1Q86UP2 1357 aaKnown RBP27.04■■□□□ 1.92
SSR1-204ENST00000474597 PTPRMP28827 1452 aa27.02■■□□□ 1.92
SSR1-204ENST00000474597 EID1Q9Y6B2 187 aa27.02■■□□□ 1.92
SSR1-204ENST00000474597 PER1O15534 1290 aaPredicted RBP27.02■■□□□ 1.92
SSR1-204ENST00000474597 RALBP1Q15311 655 aa27.01■■□□□ 1.91
SSR1-204ENST00000474597 POGKQ9P215 609 aa27.01■■□□□ 1.91
SSR1-204ENST00000474597 EVC2Q86UK5 1308 aa27.01■■□□□ 1.91
SSR1-204ENST00000474597 THEMISQ8N1K5 641 aaPredicted RBP27■■□□□ 1.91
SSR1-204ENST00000474597 MRS2Q9HD23 443 aa27■■□□□ 1.91
SSR1-204ENST00000474597 SAFB2Q14151 953 aaKnown RBP eCLIP26.99■■□□□ 1.91
SSR1-204ENST00000474597 LRPPRCP42704 1394 aaKnown RBP26.98■■□□□ 1.91
SSR1-204ENST00000474597 TXNDC2Q86VQ3 553 aa26.98■■□□□ 1.91
SSR1-204ENST00000474597 PRAM1Q96QH2 718 aa26.98■■□□□ 1.91
SSR1-204ENST00000474597 SLIT1O75093 1534 aa26.98■■□□□ 1.91
SSR1-204ENST00000474597 KNSTRNQ9Y448 316 aa26.97■■□□□ 1.91
SSR1-204ENST00000474597 DLC1Q96QB1 1528 aa26.97■■□□□ 1.91
SSR1-204ENST00000474597 PLEKHG1Q9ULL1 1385 aa26.96■■□□□ 1.91
SSR1-204ENST00000474597 CCDC184Q52MB2 194 aa26.95■■□□□ 1.91
SSR1-204ENST00000474597 CEP170BQ9Y4F5 1589 aaPredicted RBP26.95■■□□□ 1.9
SSR1-204ENST00000474597 LTKP29376 864 aa26.95■■□□□ 1.9
SSR1-204ENST00000474597 PUS7Q96PZ0 661 aaKnown RBP26.95■■□□□ 1.9
SSR1-204ENST00000474597 ARHGAP23Q9P227 1491 aa26.95■■□□□ 1.9
SSR1-204ENST00000474597 TULP4Q9NRJ4 1543 aa26.94■■□□□ 1.9
SSR1-204ENST00000474597 MYBBP1AQ9BQG0 1328 aaKnown RBP26.93■■□□□ 1.9
SSR1-204ENST00000474597 METP08581 1390 aa26.93■■□□□ 1.9
SSR1-204ENST00000474597 ABCC11Q96J66 1382 aa26.93■■□□□ 1.9
SSR1-204ENST00000474597 CC2D1BQ5T0F9 858 aaKnown RBP26.92■■□□□ 1.9
SSR1-204ENST00000474597 PARD3Q8TEW0 1356 aa26.92■■□□□ 1.9
SSR1-204ENST00000474597 TMC1Q8TDI8 760 aa26.91■■□□□ 1.9
SSR1-204ENST00000474597 KNDC1Q76NI1 1749 aa26.91■■□□□ 1.9
SSR1-204ENST00000474597 MINK1Q8N4C8 1332 aaPredicted RBP26.9■■□□□ 1.9
SSR1-204ENST00000474597 SETD1BQ9UPS6 1966 aaKnown RBP26.9■■□□□ 1.9
SSR1-204ENST00000474597 ADAMTS13Q76LX8 1427 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms