RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 LRP6O75581 1613 aa10.72□□□□□ -0.69
CCDC93-208ENST00000474546 KIF14Q15058 1648 aa10.72□□□□□ -0.69
CCDC93-208ENST00000474546 DCAF8L1A6NGE4 600 aa10.71□□□□□ -0.69
CCDC93-208ENST00000474546 MED14O60244 1454 aa10.71□□□□□ -0.69
CCDC93-208ENST00000474546 MPHOSPH9Q99550 1183 aa10.71□□□□□ -0.69
CCDC93-208ENST00000474546 ANKRD30BQ9BXX2 1392 aa10.71□□□□□ -0.69
CCDC93-208ENST00000474546 ITSN2Q9NZM3 1697 aa10.7□□□□□ -0.7
CCDC93-208ENST00000474546 LRRIQ1Q96JM4 1722 aa10.7□□□□□ -0.7
CCDC93-208ENST00000474546 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
CCDC93-208ENST00000474546 BRD4O60885 1362 aaPredicted RBP10.69□□□□□ -0.7
CCDC93-208ENST00000474546 ZNF784Q8NCA9 323 aaPredicted RBP10.69□□□□□ -0.7
CCDC93-208ENST00000474546 NGLY1Q96IV0 654 aa10.69□□□□□ -0.7
CCDC93-208ENST00000474546 DEPDC5O75140 1603 aa10.69□□□□□ -0.7
CCDC93-208ENST00000474546 PLEKHH2Q8IVE3 1493 aa10.68□□□□□ -0.7
CCDC93-208ENST00000474546 NPHP4O75161 1426 aaPredicted RBP10.68□□□□□ -0.7
CCDC93-208ENST00000474546 XIRP1Q702N8 1843 aaKnown RBP10.68□□□□□ -0.7
CCDC93-208ENST00000474546 ARID3CA6NKF2 412 aa10.68□□□□□ -0.7
CCDC93-208ENST00000474546 RALBP1Q15311 655 aa10.68□□□□□ -0.7
CCDC93-208ENST00000474546 NWD1Q149M9 1564 aa10.68□□□□□ -0.7
CCDC93-208ENST00000474546 DIP2CQ9Y2E4 1556 aa10.68□□□□□ -0.7
CCDC93-208ENST00000474546 KIF15Q9NS87 1388 aa10.67□□□□□ -0.7
CCDC93-208ENST00000474546 IQGAP1P46940 1657 aa10.67□□□□□ -0.7
CCDC93-208ENST00000474546 WASHC2CQ9Y4E1 1318 aa10.67□□□□□ -0.7
CCDC93-208ENST00000474546 ZNF518AQ6AHZ1 1483 aa10.67□□□□□ -0.7
CCDC93-208ENST00000474546 DAPK1P53355 1430 aa10.67□□□□□ -0.7
CCDC93-208ENST00000474546 FAM9BQ8IZU0 186 aa10.66□□□□□ -0.7
CCDC93-208ENST00000474546 MBD5Q9P267 1494 aa10.66□□□□□ -0.7
CCDC93-208ENST00000474546 KIF7Q2M1P5 1343 aa10.65□□□□□ -0.7
CCDC93-208ENST00000474546 KDM5DQ9BY66 1539 aa10.65□□□□□ -0.7
CCDC93-208ENST00000474546 L3MBTL2Q969R5 705 aa10.65□□□□□ -0.7
CCDC93-208ENST00000474546 HIRIP3Q9BW71 556 aaPredicted RBP10.65□□□□□ -0.7
CCDC93-208ENST00000474546 QTRT2Q9H974 415 aaKnown RBP10.65□□□□□ -0.7
CCDC93-208ENST00000474546 ADGRL2O95490 1459 aa10.65□□□□□ -0.7
CCDC93-208ENST00000474546 AFF2P51816 1311 aa10.64□□□□□ -0.71
CCDC93-208ENST00000474546 RALGAPBQ86X10 1494 aa10.64□□□□□ -0.71
CCDC93-208ENST00000474546 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
CCDC93-208ENST00000474546 SHPRHQ149N8 1683 aa10.63□□□□□ -0.71
CCDC93-208ENST00000474546 C11orf95C9JLR9 678 aaPredicted RBP10.63□□□□□ -0.71
CCDC93-208ENST00000474546 B4GALNT3Q6L9W6 998 aa10.63□□□□□ -0.71
CCDC93-208ENST00000474546 KIAA1107Q9UPP5 1409 aa10.63□□□□□ -0.71
CCDC93-208ENST00000474546 LRPPRCP42704 1394 aaKnown RBP10.62□□□□□ -0.71
CCDC93-208ENST00000474546 COL16A1Q07092 1604 aaPredicted RBP10.62□□□□□ -0.71
CCDC93-208ENST00000474546 MYBBP1AQ9BQG0 1328 aaKnown RBP10.61□□□□□ -0.71
CCDC93-208ENST00000474546 TMC1Q8TDI8 760 aa10.61□□□□□ -0.71
CCDC93-208ENST00000474546 DHX29Q7Z478 1369 aaKnown RBP10.61□□□□□ -0.71
CCDC93-208ENST00000474546 USP47Q96K76 1375 aa10.61□□□□□ -0.71
CCDC93-208ENST00000474546 CLTCQ00610 1675 aaKnown RBP10.6□□□□□ -0.71
CCDC93-208ENST00000474546 ABCA6Q8N139 1617 aa10.6□□□□□ -0.71
CCDC93-208ENST00000474546 THEMISQ8N1K5 641 aaPredicted RBP10.6□□□□□ -0.71
CCDC93-208ENST00000474546 PLEKHD1A6NEE1 506 aa10.59□□□□□ -0.71
CCDC93-208ENST00000474546 IRX6P78412 446 aaPredicted RBP10.59□□□□□ -0.71
CCDC93-208ENST00000474546 SLC4A1APQ9BWU0 796 aaKnown RBP10.59□□□□□ -0.71
CCDC93-208ENST00000474546 ANKRD30AQ9BXX3 1397 aa10.59□□□□□ -0.71
CCDC93-208ENST00000474546 BCL9LQ86UU0 1499 aa10.59□□□□□ -0.71
CCDC93-208ENST00000474546 CROCC2H7BZ55 1655 aa10.59□□□□□ -0.71
CCDC93-208ENST00000474546 LAMC1P11047 1609 aa10.58□□□□□ -0.72
CCDC93-208ENST00000474546 MLH3Q9UHC1 1453 aa10.58□□□□□ -0.72
CCDC93-208ENST00000474546 RRP7BPQ9NSQ0 103 aa10.58□□□□□ -0.72
CCDC93-208ENST00000474546 ABCC1P33527 1531 aa10.58□□□□□ -0.72
CCDC93-208ENST00000474546 ABCC5O15440 1437 aa10.58□□□□□ -0.72
CCDC93-208ENST00000474546 PLCH2O75038 1416 aa10.58□□□□□ -0.72
CCDC93-208ENST00000474546 BLMP54132 1417 aaPredicted RBP10.58□□□□□ -0.72
CCDC93-208ENST00000474546 PNISRQ8TF01 805 aaKnown RBP10.57□□□□□ -0.72
CCDC93-208ENST00000474546 DAXXQ9UER7 740 aaPredicted RBP10.57□□□□□ -0.72
CCDC93-208ENST00000474546 E9PCH4 1651 aa10.57□□□□□ -0.72
CCDC93-208ENST00000474546 PSDA5PKW4 1024 aaPredicted RBP10.56□□□□□ -0.72
CCDC93-208ENST00000474546 PRELPP51888 382 aa10.56□□□□□ -0.72
CCDC93-208ENST00000474546 RRP1P56182 461 aaKnown RBP10.56□□□□□ -0.72
CCDC93-208ENST00000474546 NLRP13Q86W25 1043 aa10.56□□□□□ -0.72
CCDC93-208ENST00000474546 EFCAB2Q5VUJ9 269 aa10.55□□□□□ -0.72
CCDC93-208ENST00000474546 AFAP1Q8N556 730 aa10.55□□□□□ -0.72
CCDC93-208ENST00000474546 NGEFQ8N5V2 710 aa10.55□□□□□ -0.72
CCDC93-208ENST00000474546 PZPP20742 1482 aa10.55□□□□□ -0.72
CCDC93-208ENST00000474546 EIF3AQ14152 1382 aaKnown RBP10.54□□□□□ -0.72
CCDC93-208ENST00000474546 UTRNP46939 3433 aa10.54□□□□□ -0.72
CCDC93-208ENST00000474546 TROQ12816 1431 aaPredicted RBP10.54□□□□□ -0.72
CCDC93-208ENST00000474546 SF3B2Q13435 895 aaKnown RBP10.54□□□□□ -0.72
CCDC93-208ENST00000474546 NBR1Q14596 966 aa10.54□□□□□ -0.72
CCDC93-208ENST00000474546 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.54□□□□□ -0.72
CCDC93-208ENST00000474546 RCAN3Q9UKA8 241 aa10.54□□□□□ -0.72
CCDC93-208ENST00000474546 EIF2AK4Q9P2K8 1649 aaKnown RBP10.54□□□□□ -0.72
CCDC93-208ENST00000474546 SLC24A1O60721 1099 aa10.53□□□□□ -0.72
CCDC93-208ENST00000474546 CAPN15O75808 1086 aa10.53□□□□□ -0.72
CCDC93-208ENST00000474546 FAM135AQ9P2D6 1515 aa10.53□□□□□ -0.72
CCDC93-208ENST00000474546 BACH2Q9BYV9 841 aa10.52□□□□□ -0.73
CCDC93-208ENST00000474546 SLAIN2Q9P270 581 aa10.52□□□□□ -0.73
CCDC93-208ENST00000474546 CAMSAP2Q08AD1 1489 aa10.52□□□□□ -0.73
CCDC93-208ENST00000474546 ZC3H13Q5T200 1668 aaKnown RBP10.52□□□□□ -0.73
CCDC93-208ENST00000474546 CCDC144AA2RUR9 1427 aa10.51□□□□□ -0.73
CCDC93-208ENST00000474546 AAMPQ13685 434 aa10.51□□□□□ -0.73
CCDC93-208ENST00000474546 NBPF8Q3BBV2 869 aa10.51□□□□□ -0.73
CCDC93-208ENST00000474546 RSPH4AQ5TD94 716 aa10.51□□□□□ -0.73
CCDC93-208ENST00000474546 DEFB132Q7Z7B7 95 aa10.51□□□□□ -0.73
CCDC93-208ENST00000474546 ATP7AQ04656 1500 aa10.51□□□□□ -0.73
CCDC93-208ENST00000474546 CHD4Q14839 1912 aa10.5□□□□□ -0.73
CCDC93-208ENST00000474546 GIGYF1O75420 1035 aaPredicted RBP10.5□□□□□ -0.73
CCDC93-208ENST00000474546 NEFMP07197 916 aa10.5□□□□□ -0.73
CCDC93-208ENST00000474546 PDE4AP27815 886 aa10.5□□□□□ -0.73
CCDC93-208ENST00000474546 STAC3Q96MF2 364 aa10.5□□□□□ -0.73
CCDC93-208ENST00000474546 CHIC2Q9UKJ5 165 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms