RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 PRR20BP86481 221 aa8.44□□□□□ -1.06
ECHDC1-213ENST00000474240 PRR20AP86496 221 aa8.44□□□□□ -1.06
ECHDC1-213ENST00000474240 ST8SIA5O15466 376 aa8.43□□□□□ -1.06
ECHDC1-213ENST00000474240 PLCB2Q00722 1185 aa8.43□□□□□ -1.06
ECHDC1-213ENST00000474240 ZNF697Q5TEC3 545 aa8.43□□□□□ -1.06
ECHDC1-213ENST00000474240 PADI6Q6TGC4 694 aa8.43□□□□□ -1.06
ECHDC1-213ENST00000474240 ZNF598Q86UK7 904 aaKnown RBP8.43□□□□□ -1.06
ECHDC1-213ENST00000474240 SPRYD3Q8NCJ5 442 aa8.43□□□□□ -1.06
ECHDC1-213ENST00000474240 TREML4Q6UXN2 200 aa8.42□□□□□ -1.06
ECHDC1-213ENST00000474240 PPEF1O14829 653 aaPredicted RBP8.41□□□□□ -1.06
ECHDC1-213ENST00000474240 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
ECHDC1-213ENST00000474240 S1PR4O95977 384 aa8.4□□□□□ -1.06
ECHDC1-213ENST00000474240 SLC4A3P48751 1232 aa8.4□□□□□ -1.06
ECHDC1-213ENST00000474240 LIAT1Q6ZQX7 453 aa8.4□□□□□ -1.06
ECHDC1-213ENST00000474240 ANKLE1Q8NAG6 615 aa8.4□□□□□ -1.06
ECHDC1-213ENST00000474240 OSBPP22059 807 aa8.39□□□□□ -1.07
ECHDC1-213ENST00000474240 TTC13Q8NBP0 860 aa8.39□□□□□ -1.07
ECHDC1-213ENST00000474240 PRR14Q9BWN1 585 aa8.39□□□□□ -1.07
ECHDC1-213ENST00000474240 GDF9O60383 454 aa8.38□□□□□ -1.07
ECHDC1-213ENST00000474240 PAXIP1Q6ZW49 1069 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-213ENST00000474240 AAASQ9NRG9 546 aa8.37□□□□□ -1.07
ECHDC1-213ENST00000474240 SLC24A1O60721 1099 aa8.35□□□□□ -1.07
ECHDC1-213ENST00000474240 CFAP44Q96MT7 982 aa8.35□□□□□ -1.07
ECHDC1-213ENST00000474240 NPDC1Q9NQX5 325 aaPredicted RBP8.35□□□□□ -1.07
ECHDC1-213ENST00000474240 E2F4Q16254 413 aa8.34□□□□□ -1.07
ECHDC1-213ENST00000474240 PLA2G2CQ5R387 149 aa8.34□□□□□ -1.07
ECHDC1-213ENST00000474240 EYA1Q99502 592 aa8.34□□□□□ -1.07
ECHDC1-213ENST00000474240 ADH1BP00325 375 aa8.31□□□□□ -1.08
ECHDC1-213ENST00000474240 FOXC1Q12948 553 aa8.31□□□□□ -1.08
ECHDC1-213ENST00000474240 DACH1Q9UI36 760 aa8.31□□□□□ -1.08
ECHDC1-213ENST00000474240 WFS1O76024 890 aa8.3□□□□□ -1.08
ECHDC1-213ENST00000474240 CFHP08603 1231 aa8.3□□□□□ -1.08
ECHDC1-213ENST00000474240 ARIH1Q9Y4X5 557 aaPredicted RBP8.3□□□□□ -1.08
ECHDC1-213ENST00000474240 ACTN4O43707 911 aaKnown RBP8.29□□□□□ -1.08
ECHDC1-213ENST00000474240 KMT5BQ4FZB7 885 aa8.29□□□□□ -1.08
ECHDC1-213ENST00000474240 PKD2L1Q9P0L9 805 aa8.29□□□□□ -1.08
ECHDC1-213ENST00000474240 DNAJB2P25686 324 aa8.28□□□□□ -1.08
ECHDC1-213ENST00000474240 SLC6A16Q9GZN6 736 aa8.28□□□□□ -1.08
ECHDC1-213ENST00000474240 GMPR2Q9P2T1 348 aaKnown RBP8.28□□□□□ -1.08
ECHDC1-213ENST00000474240 HAP1P54257 671 aaPredicted RBP8.27□□□□□ -1.09
ECHDC1-213ENST00000474240 STK17AQ9UEE5 414 aa8.27□□□□□ -1.09
ECHDC1-213ENST00000474240 CRIPAKQ8N1N5 446 aa8.26□□□□□ -1.09
ECHDC1-213ENST00000474240 TMEM134Q9H6X4 195 aa8.26□□□□□ -1.09
ECHDC1-213ENST00000474240 C11orf95C9JLR9 678 aaPredicted RBP8.25□□□□□ -1.09
ECHDC1-213ENST00000474240 NFX1Q12986 1120 aaKnown RBP8.25□□□□□ -1.09
ECHDC1-213ENST00000474240 NR1I2O75469 434 aa8.24□□□□□ -1.09
ECHDC1-213ENST00000474240 AXIN1O15169 862 aa8.23□□□□□ -1.09
ECHDC1-213ENST00000474240 LMOD2Q6P5Q4 547 aa8.23□□□□□ -1.09
ECHDC1-213ENST00000474240 VSIG10Q8N0Z9 540 aa8.23□□□□□ -1.09
ECHDC1-213ENST00000474240 RBM46Q8TBY0 533 aaKnown RBP8.22□□□□□ -1.09
ECHDC1-213ENST00000474240 WDR70Q9NW82 654 aa8.22□□□□□ -1.09
ECHDC1-213ENST00000474240 WIPF1O43516 503 aa8.21□□□□□ -1.1
ECHDC1-213ENST00000474240 AVPP01185 164 aa8.21□□□□□ -1.1
ECHDC1-213ENST00000474240 SLC10A3P09131 477 aa8.21□□□□□ -1.1
ECHDC1-213ENST00000474240 FAM161AQ3B820 660 aa8.21□□□□□ -1.1
ECHDC1-213ENST00000474240 TOR4AQ9NXH8 423 aa8.21□□□□□ -1.1
ECHDC1-213ENST00000474240 RCCD1A6NED2 376 aa8.2□□□□□ -1.1
ECHDC1-213ENST00000474240 INSM1Q01101 510 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-213ENST00000474240 LCE2CQ5TA81 110 aa8.2□□□□□ -1.1
ECHDC1-213ENST00000474240 ADGRG1Q9Y653 693 aa8.2□□□□□ -1.1
ECHDC1-213ENST00000474240 PUS10Q3MIT2 529 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-213ENST00000474240 CYP4X1Q8N118 509 aa8.19□□□□□ -1.1
ECHDC1-213ENST00000474240 SPSB2Q99619 263 aa8.19□□□□□ -1.1
ECHDC1-213ENST00000474240 CTC1Q2NKJ3 1217 aa8.18□□□□□ -1.1
ECHDC1-213ENST00000474240 SCUBE3Q8IX30 993 aa8.18□□□□□ -1.1
ECHDC1-213ENST00000474240 PTGDRQ13258 359 aa8.17□□□□□ -1.1
ECHDC1-213ENST00000474240 FCF1Q9Y324 198 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-213ENST00000474240 MLLT3P42568 568 aaPredicted RBP8.16□□□□□ -1.1
ECHDC1-213ENST00000474240 RPIAP49247 311 aa8.16□□□□□ -1.1
ECHDC1-213ENST00000474240 TSHZ2Q9NRE2 1034 aa8.15□□□□□ -1.1
ECHDC1-213ENST00000474240 SMCPP49901 116 aaPredicted RBP8.14□□□□□ -1.11
ECHDC1-213ENST00000474240 TTC24A2A3L6 582 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-213ENST00000474240 SNRPBP14678 240 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-213ENST00000474240 TERTO14746 1132 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-213ENST00000474240 CD2BP2O95400 341 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-213ENST00000474240 ATP13A2Q9NQ11 1180 aa8.12□□□□□ -1.11
ECHDC1-213ENST00000474240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-213ENST00000474240 PRDM9Q9NQV7 894 aa8.11□□□□□ -1.11
ECHDC1-213ENST00000474240 NUTM2FA1L443 756 aa8.09□□□□□ -1.11
ECHDC1-213ENST00000474240 SMPD1P17405 629 aa8.08□□□□□ -1.12
ECHDC1-213ENST00000474240 P3H3Q8IVL6 736 aa8.08□□□□□ -1.12
ECHDC1-213ENST00000474240 TRIM47Q96LD4 638 aa8.08□□□□□ -1.12
ECHDC1-213ENST00000474240 LOC100996750A0A140TA64 210 aa8.07□□□□□ -1.12
ECHDC1-213ENST00000474240 KRTAP4-6Q9BYQ5 205 aa8.07□□□□□ -1.12
ECHDC1-213ENST00000474240 FAM160A2Q8N612 972 aaPredicted RBP8.06□□□□□ -1.12
ECHDC1-213ENST00000474240 PXYLP1Q8TE99 480 aa8.06□□□□□ -1.12
ECHDC1-213ENST00000474240 THAP11Q96EK4 314 aa8.06□□□□□ -1.12
ECHDC1-213ENST00000474240 FUT2Q10981 343 aa8.05□□□□□ -1.12
ECHDC1-213ENST00000474240 MORN1Q5T089 497 aa8.05□□□□□ -1.12
ECHDC1-213ENST00000474240 SENP2Q9HC62 589 aa8.05□□□□□ -1.12
ECHDC1-213ENST00000474240 J3QL48 77 aa8.04□□□□□ -1.12
ECHDC1-213ENST00000474240 ZBTB24O43167 697 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-213ENST00000474240 RDH13Q8NBN7 331 aa8.04□□□□□ -1.12
ECHDC1-213ENST00000474240 WNT7AO00755 349 aa8.03□□□□□ -1.12
ECHDC1-213ENST00000474240 FMNL1O95466 1100 aaPredicted RBP8.03□□□□□ -1.12
ECHDC1-213ENST00000474240 RSPH4AQ5TD94 716 aa8.03□□□□□ -1.12
ECHDC1-213ENST00000474240 SNIP1Q8TAD8 396 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-213ENST00000474240 KDM2AQ9Y2K7 1162 aa8.03□□□□□ -1.12
ECHDC1-213ENST00000474240 SLC27A5Q9Y2P5 690 aa8.03□□□□□ -1.12
ECHDC1-213ENST00000474240 FAM181BA6NEQ2 426 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms