RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 ABCC3O15438 1527 aa28.66■■■□□ 2.18
RNF220-209ENST00000474064 DIP2BQ9P265 1576 aa28.66■■■□□ 2.18
RNF220-209ENST00000474064 TSPOAP1O95153 1857 aa28.66■■■□□ 2.18
RNF220-209ENST00000474064 KIF1BO60333 1816 aa28.65■■■□□ 2.18
RNF220-209ENST00000474064 MROH2AA6NES4 1674 aa28.62■■■□□ 2.17
RNF220-209ENST00000474064 SCAF11Q99590 1463 aaKnown RBP28.6■■■□□ 2.17
RNF220-209ENST00000474064 PRKCSHP14314 528 aaPredicted RBP28.6■■■□□ 2.17
RNF220-209ENST00000474064 IRX6P78412 446 aaPredicted RBP28.6■■■□□ 2.17
RNF220-209ENST00000474064 PANK3Q9H999 370 aa28.58■■■□□ 2.17
RNF220-209ENST00000474064 NOS1P29475 1434 aa28.58■■■□□ 2.17
RNF220-209ENST00000474064 TMC1Q8TDI8 760 aa28.58■■■□□ 2.17
RNF220-209ENST00000474064 NEURL4Q96JN8 1562 aa28.58■■■□□ 2.17
RNF220-209ENST00000474064 IQGAP1P46940 1657 aa28.57■■■□□ 2.16
RNF220-209ENST00000474064 MYOM2P54296 1465 aa28.56■■■□□ 2.16
RNF220-209ENST00000474064 CAMSAP1Q5T5Y3 1602 aa28.56■■■□□ 2.16
RNF220-209ENST00000474064 PER1O15534 1290 aaPredicted RBP28.55■■■□□ 2.16
RNF220-209ENST00000474064 ADGRB3O60242 1522 aa28.54■■■□□ 2.16
RNF220-209ENST00000474064 NUTM2DQ5VT03 806 aaPredicted RBP28.54■■■□□ 2.16
RNF220-209ENST00000474064 RALBP1Q15311 655 aa28.53■■■□□ 2.16
RNF220-209ENST00000474064 CC2D1BQ5T0F9 858 aaKnown RBP28.53■■■□□ 2.16
RNF220-209ENST00000474064 SENP3-EIF4A1A0A087X0R7 540 aa28.53■■■□□ 2.16
RNF220-209ENST00000474064 MYBBP1AQ9BQG0 1328 aaKnown RBP28.52■■■□□ 2.16
RNF220-209ENST00000474064 KTN1Q86UP2 1357 aaKnown RBP28.51■■■□□ 2.16
RNF220-209ENST00000474064 DEKP35659 375 aaKnown RBP28.51■■■□□ 2.16
RNF220-209ENST00000474064 SIGLEC1Q9BZZ2 1709 aa28.51■■■□□ 2.15
RNF220-209ENST00000474064 EIF3AQ14152 1382 aaKnown RBP28.5■■■□□ 2.15
RNF220-209ENST00000474064 IFT172Q9UG01 1749 aa28.49■■■□□ 2.15
RNF220-209ENST00000474064 PNISRQ8TF01 805 aaKnown RBP28.48■■■□□ 2.15
RNF220-209ENST00000474064 SENP3Q9H4L4 574 aaPredicted RBP28.48■■■□□ 2.15
RNF220-209ENST00000474064 KIAA1210Q9ULL0 1709 aa28.47■■■□□ 2.15
RNF220-209ENST00000474064 IDI1Q13907 227 aa28.46■■■□□ 2.15
RNF220-209ENST00000474064 ZBED9Q6R2W3 1325 aa28.45■■■□□ 2.15
RNF220-209ENST00000474064 ZMYM4Q5VZL5 1548 aa28.45■■■□□ 2.15
RNF220-209ENST00000474064 SYNMO15061 1565 aa28.45■■■□□ 2.14
RNF220-209ENST00000474064 NRXN1Q9ULB1 1477 aa28.45■■■□□ 2.14
RNF220-209ENST00000474064 PARD3Q8TEW0 1356 aa28.44■■■□□ 2.14
RNF220-209ENST00000474064 CDCA8Q53HL2 280 aa28.43■■■□□ 2.14
RNF220-209ENST00000474064 TMEM132EQ6IEE7 984 aa28.43■■■□□ 2.14
RNF220-209ENST00000474064 TRAK1Q9UPV9 953 aa28.42■■■□□ 2.14
RNF220-209ENST00000474064 BRD4O60885 1362 aaPredicted RBP28.42■■■□□ 2.14
RNF220-209ENST00000474064 FBXO31Q5XUX0 539 aaPredicted RBP28.42■■■□□ 2.14
RNF220-209ENST00000474064 ARHGAP31Q2M1Z3 1444 aa28.41■■■□□ 2.14
RNF220-209ENST00000474064 MLECQ14165 292 aa28.41■■■□□ 2.14
RNF220-209ENST00000474064 RPGRIP1LQ68CZ1 1315 aa28.4■■■□□ 2.14
RNF220-209ENST00000474064 PPLO60437 1756 aa28.39■■■□□ 2.14
RNF220-209ENST00000474064 PIK3C2GO75747 1445 aa28.39■■■□□ 2.14
RNF220-209ENST00000474064 NLRP13Q86W25 1043 aa28.39■■■□□ 2.14
RNF220-209ENST00000474064 C14orf93Q9H972 538 aaKnown RBP28.39■■■□□ 2.14
RNF220-209ENST00000474064 ZC3H13Q5T200 1668 aaKnown RBP28.39■■■□□ 2.13
RNF220-209ENST00000474064 KNSTRNQ9Y448 316 aa28.37■■■□□ 2.13
RNF220-209ENST00000474064 PIK3C2BO00750 1634 aa28.36■■■□□ 2.13
RNF220-209ENST00000474064 SLC52A1Q9NWF4 448 aa28.35■■■□□ 2.13
RNF220-209ENST00000474064 VGFO15240 615 aaPredicted RBP28.34■■■□□ 2.13
RNF220-209ENST00000474064 CENPJQ9HC77 1338 aaPredicted RBP28.32■■■□□ 2.12
RNF220-209ENST00000474064 ERVK-7P63135 1459 aa28.31■■■□□ 2.12
RNF220-209ENST00000474064 KIF13AQ9H1H9 1805 aa28.31■■■□□ 2.12
RNF220-209ENST00000474064 PPP4R2Q9NY27 417 aa28.3■■■□□ 2.12
RNF220-209ENST00000474064 NEXMIFQ5QGS0 1516 aa28.29■■■□□ 2.12
RNF220-209ENST00000474064 LRPPRCP42704 1394 aaKnown RBP28.29■■■□□ 2.12
RNF220-209ENST00000474064 PREX1Q8TCU6 1659 aa28.29■■■□□ 2.12
RNF220-209ENST00000474064 SETBP1Q9Y6X0 1596 aa28.28■■■□□ 2.12
RNF220-209ENST00000474064 KDM5AP29375 1690 aaKnown RBP28.26■■■□□ 2.12
RNF220-209ENST00000474064 ADGRB1O14514 1584 aa28.26■■■□□ 2.12
RNF220-209ENST00000474064 AMER1Q5JTC6 1135 aaPredicted RBP28.26■■■□□ 2.11
RNF220-209ENST00000474064 ERICH6BQ5W0A0 696 aa28.26■■■□□ 2.11
RNF220-209ENST00000474064 STAG3Q9UJ98 1225 aa28.26■■■□□ 2.11
RNF220-209ENST00000474064 NBR1Q14596 966 aa28.26■■■□□ 2.11
RNF220-209ENST00000474064 SLC24A1O60721 1099 aa28.25■■■□□ 2.11
RNF220-209ENST00000474064 SALL2Q9Y467 1007 aaPredicted RBP28.25■■■□□ 2.11
RNF220-209ENST00000474064 MYOM1P52179 1685 aa28.24■■■□□ 2.11
RNF220-209ENST00000474064 AGLP35573 1532 aa28.22■■■□□ 2.11
RNF220-209ENST00000474064 MYO5BQ9ULV0 1848 aa28.22■■■□□ 2.11
RNF220-209ENST00000474064 STK26Q9P289 416 aa28.21■■■□□ 2.11
RNF220-209ENST00000474064 B4GALNT3Q6L9W6 998 aa28.21■■■□□ 2.11
RNF220-209ENST00000474064 REREQ9P2R6 1566 aa28.21■■■□□ 2.11
RNF220-209ENST00000474064 SAFB2Q14151 953 aaKnown RBP eCLIP28.2■■■□□ 2.11
RNF220-209ENST00000474064 NOP58Q9Y2X3 529 aaKnown RBP28.2■■■□□ 2.11
RNF220-209ENST00000474064 CLTCQ00610 1675 aaKnown RBP28.2■■■□□ 2.1
RNF220-209ENST00000474064 MYO3AQ8NEV4 1616 aa28.19■■■□□ 2.1
RNF220-209ENST00000474064 TMEM131LA2VDJ0 1609 aa28.19■■■□□ 2.1
RNF220-209ENST00000474064 SBNO2Q9Y2G9 1366 aa28.19■■■□□ 2.1
RNF220-209ENST00000474064 PPP2R1AP30153 589 aa28.18■■■□□ 2.1
RNF220-209ENST00000474064 ASXL1Q8IXJ9 1541 aa28.18■■■□□ 2.1
RNF220-209ENST00000474064 CARD14Q9BXL6 1004 aa28.18■■■□□ 2.1
RNF220-209ENST00000474064 PPP6R1Q9UPN7 881 aa28.18■■■□□ 2.1
RNF220-209ENST00000474064 PAK3O75914 559 aaPredicted RBP28.16■■■□□ 2.1
RNF220-209ENST00000474064 ANO8Q9HCE9 1232 aaPredicted RBP28.16■■■□□ 2.1
RNF220-209ENST00000474064 ARHGEF40Q8TER5 1519 aa28.15■■■□□ 2.1
RNF220-209ENST00000474064 ESF1Q9H501 851 aaKnown RBP28.15■■■□□ 2.1
RNF220-209ENST00000474064 QRICH2Q9H0J4 1663 aa28.15■■■□□ 2.1
RNF220-209ENST00000474064 SLC12A5Q9H2X9 1139 aa28.14■■■□□ 2.1
RNF220-209ENST00000474064 NUDCQ9Y266 331 aa28.14■■■□□ 2.1
RNF220-209ENST00000474064 SMG6Q86US8 1419 aaKnown RBP28.13■■■□□ 2.09
RNF220-209ENST00000474064 ZFYVE9O95405 1425 aa28.12■■■□□ 2.09
RNF220-209ENST00000474064 ADAMTS8Q9UP79 889 aa28.07■■■□□ 2.08
RNF220-209ENST00000474064 CABP2Q9NPB3 220 aa28.06■■■□□ 2.08
RNF220-209ENST00000474064 EVC2Q86UK5 1308 aa28.06■■■□□ 2.08
RNF220-209ENST00000474064 ARHGEF28Q8N1W1 1705 aaKnown RBP28.05■■■□□ 2.08
RNF220-209ENST00000474064 NPC1L1Q9UHC9 1359 aa28.05■■■□□ 2.08
RNF220-209ENST00000474064 ZMYM3Q14202 1370 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 368.2 ms