RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 OSBPP22059 807 aa7.33□□□□□ -1.24
CCDC39-203ENST00000473854 ZNF697Q5TEC3 545 aa7.33□□□□□ -1.24
CCDC39-203ENST00000473854 LMOD2Q6P5Q4 547 aa7.33□□□□□ -1.24
CCDC39-203ENST00000473854 PADI6Q6TGC4 694 aa7.33□□□□□ -1.24
CCDC39-203ENST00000473854 TREML4Q6UXN2 200 aa7.33□□□□□ -1.24
CCDC39-203ENST00000473854 CDHR5Q9HBB8 845 aa7.33□□□□□ -1.24
CCDC39-203ENST00000473854 PRIM1P49642 420 aaKnown RBP7.32□□□□□ -1.24
CCDC39-203ENST00000473854 KMT5BQ4FZB7 885 aa7.32□□□□□ -1.24
CCDC39-203ENST00000473854 WDR70Q9NW82 654 aa7.32□□□□□ -1.24
CCDC39-203ENST00000473854 BLOC1S3Q6QNY0 202 aa7.31□□□□□ -1.24
CCDC39-203ENST00000473854 EYA1Q99502 592 aa7.3□□□□□ -1.24
CCDC39-203ENST00000473854 STK17AQ9UEE5 414 aa7.3□□□□□ -1.24
CCDC39-203ENST00000473854 DNAJB2P25686 324 aa7.29□□□□□ -1.24
CCDC39-203ENST00000473854 BBXQ8WY36 941 aaPredicted RBP7.29□□□□□ -1.24
CCDC39-203ENST00000473854 ACTN4O43707 911 aaKnown RBP7.28□□□□□ -1.24
CCDC39-203ENST00000473854 GDF9O60383 454 aa7.28□□□□□ -1.24
CCDC39-203ENST00000473854 NR1I2O75469 434 aa7.28□□□□□ -1.24
CCDC39-203ENST00000473854 ADH1BP00325 375 aa7.28□□□□□ -1.24
CCDC39-203ENST00000473854 EMID1Q96A84 441 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-203ENST00000473854 S1PR4O95977 384 aa7.27□□□□□ -1.25
CCDC39-203ENST00000473854 LCE2AQ5TA79 106 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-203ENST00000473854 POTECB2RU33 542 aa7.26□□□□□ -1.25
CCDC39-203ENST00000473854 TNFRSF10AO00220 468 aa7.26□□□□□ -1.25
CCDC39-203ENST00000473854 TLL1O43897 1013 aa7.26□□□□□ -1.25
CCDC39-203ENST00000473854 LIAT1Q6ZQX7 453 aa7.26□□□□□ -1.25
CCDC39-203ENST00000473854 CRIPAKQ8N1N5 446 aa7.26□□□□□ -1.25
CCDC39-203ENST00000473854 RBM46Q8TBY0 533 aaKnown RBP7.26□□□□□ -1.25
CCDC39-203ENST00000473854 NPDC1Q9NQX5 325 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-203ENST00000473854 SLC6A16Q9GZN6 736 aa7.25□□□□□ -1.25
CCDC39-203ENST00000473854 AAASQ9NRG9 546 aa7.25□□□□□ -1.25
CCDC39-203ENST00000473854 TMEM134Q9H6X4 195 aa7.24□□□□□ -1.25
CCDC39-203ENST00000473854 WFS1O76024 890 aa7.23□□□□□ -1.25
CCDC39-203ENST00000473854 CFHP08603 1231 aa7.23□□□□□ -1.25
CCDC39-203ENST00000473854 INSM1Q01101 510 aaPredicted RBP7.23□□□□□ -1.25
CCDC39-203ENST00000473854 SPRYD3Q8NCJ5 442 aa7.23□□□□□ -1.25
CCDC39-203ENST00000473854 PPEF1O14829 653 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-203ENST00000473854 ST8SIA5O15466 376 aa7.22□□□□□ -1.25
CCDC39-203ENST00000473854 CTC1Q2NKJ3 1217 aa7.22□□□□□ -1.25
CCDC39-203ENST00000473854 RSPH4AQ5TD94 716 aa7.22□□□□□ -1.25
CCDC39-203ENST00000473854 RPIAP49247 311 aa7.21□□□□□ -1.26
CCDC39-203ENST00000473854 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.21□□□□□ -1.26
CCDC39-203ENST00000473854 AVPP01185 164 aa7.2□□□□□ -1.26
CCDC39-203ENST00000473854 AXIN1O15169 862 aa7.19□□□□□ -1.26
CCDC39-203ENST00000473854 C11orf95C9JLR9 678 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-203ENST00000473854 WIPF1O43516 503 aa7.18□□□□□ -1.26
CCDC39-203ENST00000473854 CD2BP2O95400 341 aaKnown RBP7.18□□□□□ -1.26
CCDC39-203ENST00000473854 FOXC1Q12948 553 aa7.18□□□□□ -1.26
CCDC39-203ENST00000473854 CYP4X1Q8N118 509 aa7.18□□□□□ -1.26
CCDC39-203ENST00000473854 PKD2L1Q9P0L9 805 aa7.18□□□□□ -1.26
CCDC39-203ENST00000473854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.17□□□□□ -1.26
CCDC39-203ENST00000473854 RCCD1A6NED2 376 aa7.17□□□□□ -1.26
CCDC39-203ENST00000473854 SMCPP49901 116 aaPredicted RBP7.17□□□□□ -1.26
CCDC39-203ENST00000473854 ADGRG1Q9Y653 693 aa7.17□□□□□ -1.26
CCDC39-203ENST00000473854 PTGDRQ13258 359 aa7.16□□□□□ -1.26
CCDC39-203ENST00000473854 SPSB2Q99619 263 aa7.16□□□□□ -1.26
CCDC39-203ENST00000473854 TOR4AQ9NXH8 423 aa7.16□□□□□ -1.26
CCDC39-203ENST00000473854 PLA2G2CQ5R387 149 aa7.15□□□□□ -1.26
CCDC39-203ENST00000473854 SCUBE3Q8IX30 993 aa7.15□□□□□ -1.26
CCDC39-203ENST00000473854 GMPR2Q9P2T1 348 aaKnown RBP7.14□□□□□ -1.27
CCDC39-203ENST00000473854 FAM181BA6NEQ2 426 aa7.13□□□□□ -1.27
CCDC39-203ENST00000473854 NFX1Q12986 1120 aaKnown RBP7.13□□□□□ -1.27
CCDC39-203ENST00000473854 OATP04181 439 aa7.12□□□□□ -1.27
CCDC39-203ENST00000473854 SLC10A3P09131 477 aa7.12□□□□□ -1.27
CCDC39-203ENST00000473854 SUZ12Q15022 739 aaKnown RBP7.12□□□□□ -1.27
CCDC39-203ENST00000473854 SENP2Q9HC62 589 aa7.12□□□□□ -1.27
CCDC39-203ENST00000473854 TTC24A2A3L6 582 aaPredicted RBP7.11□□□□□ -1.27
CCDC39-203ENST00000473854 ARHGEF1Q92888 912 aaKnown RBP7.11□□□□□ -1.27
CCDC39-203ENST00000473854 ZBTB24O43167 697 aaPredicted RBP7.1□□□□□ -1.27
CCDC39-203ENST00000473854 FCF1Q9Y324 198 aaKnown RBP7.1□□□□□ -1.27
CCDC39-203ENST00000473854 FCHSD2O94868 740 aa7.09□□□□□ -1.27
CCDC39-203ENST00000473854 KIFC2Q96AC6 838 aa7.09□□□□□ -1.27
CCDC39-203ENST00000473854 DACH1Q9UI36 760 aa7.09□□□□□ -1.27
CCDC39-203ENST00000473854 NUTM2FA1L443 756 aa7.08□□□□□ -1.28
CCDC39-203ENST00000473854 FMNL1O95466 1100 aaPredicted RBP7.08□□□□□ -1.28
CCDC39-203ENST00000473854 TERTO14746 1132 aaKnown RBP7.07□□□□□ -1.28
CCDC39-203ENST00000473854 PUS10Q3MIT2 529 aaKnown RBP7.07□□□□□ -1.28
CCDC39-203ENST00000473854 SALL2Q9Y467 1007 aaPredicted RBP7.07□□□□□ -1.28
CCDC39-203ENST00000473854 WNT7AO00755 349 aa7.06□□□□□ -1.28
CCDC39-203ENST00000473854 MLLT3P42568 568 aaPredicted RBP7.06□□□□□ -1.28
CCDC39-203ENST00000473854 SNIP1Q8TAD8 396 aaKnown RBP7.06□□□□□ -1.28
CCDC39-203ENST00000473854 PXYLP1Q8TE99 480 aa7.06□□□□□ -1.28
CCDC39-203ENST00000473854 TRIM47Q96LD4 638 aa7.06□□□□□ -1.28
CCDC39-203ENST00000473854 ATP13A2Q9NQ11 1180 aa7.06□□□□□ -1.28
CCDC39-203ENST00000473854 ATP6V1AP38606 617 aa7.05□□□□□ -1.28
CCDC39-203ENST00000473854 SLC16A10Q8TF71 515 aa7.05□□□□□ -1.28
CCDC39-203ENST00000473854 REPIN1Q9BWE0 567 aaKnown RBP7.05□□□□□ -1.28
CCDC39-203ENST00000473854 MORN1Q5T089 497 aa7.04□□□□□ -1.28
CCDC39-203ENST00000473854 PAXIP1Q6ZW49 1069 aaPredicted RBP7.04□□□□□ -1.28
CCDC39-203ENST00000473854 CFAP44Q96MT7 982 aa7.04□□□□□ -1.28
CCDC39-203ENST00000473854 FAM161AQ3B820 660 aa7.03□□□□□ -1.28
CCDC39-203ENST00000473854 MSS51Q4VC12 460 aa7.03□□□□□ -1.28
CCDC39-203ENST00000473854 RDH13Q8NBN7 331 aa7.03□□□□□ -1.28
CCDC39-203ENST00000473854 THAP11Q96EK4 314 aa7.03□□□□□ -1.28
CCDC39-203ENST00000473854 GRIPAP1Q4V328 841 aa7.02□□□□□ -1.29
CCDC39-203ENST00000473854 SULF1Q8IWU6 871 aa7.02□□□□□ -1.29
CCDC39-203ENST00000473854 SMPD1P17405 629 aa7.01□□□□□ -1.29
CCDC39-203ENST00000473854 HIC1Q14526 733 aa7.01□□□□□ -1.29
CCDC39-203ENST00000473854 METTL3Q86U44 580 aaKnown RBP7.01□□□□□ -1.29
CCDC39-203ENST00000473854 DAXXQ9UER7 740 aaPredicted RBP7.01□□□□□ -1.29
CCDC39-203ENST00000473854 SNRPBP14678 240 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms