RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 PCDHB3Q9Y5E6 796 aa5.4□□□□□ -1.54
CALD1-216ENST00000473714 C11orf95C9JLR9 678 aaPredicted RBP5.38□□□□□ -1.55
CALD1-216ENST00000473714 GDF9O60383 454 aa5.38□□□□□ -1.55
CALD1-216ENST00000473714 AMER1Q5JTC6 1135 aaPredicted RBP5.38□□□□□ -1.55
CALD1-216ENST00000473714 SWT1Q5T5J6 900 aaKnown RBP5.38□□□□□ -1.55
CALD1-216ENST00000473714 LIAT1Q6ZQX7 453 aa5.38□□□□□ -1.55
CALD1-216ENST00000473714 WIPF1O43516 503 aa5.37□□□□□ -1.55
CALD1-216ENST00000473714 SPDYE16A6NNV3 312 aaPredicted RBP5.36□□□□□ -1.55
CALD1-216ENST00000473714 PPEF1O14829 653 aaPredicted RBP5.36□□□□□ -1.55
CALD1-216ENST00000473714 CADPS2Q86UW7 1296 aa5.36□□□□□ -1.55
CALD1-216ENST00000473714 SLC24A1O60721 1099 aa5.35□□□□□ -1.55
CALD1-216ENST00000473714 NFX1Q12986 1120 aaKnown RBP5.35□□□□□ -1.55
CALD1-216ENST00000473714 BLOC1S3Q6QNY0 202 aa5.35□□□□□ -1.55
CALD1-216ENST00000473714 RBM27Q9P2N5 1060 aaKnown RBP5.35□□□□□ -1.55
CALD1-216ENST00000473714 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
CALD1-216ENST00000473714 AXIN1O15169 862 aa5.34□□□□□ -1.55
CALD1-216ENST00000473714 S1PR4O95977 384 aa5.34□□□□□ -1.55
CALD1-216ENST00000473714 FOXC1Q12948 553 aa5.34□□□□□ -1.55
CALD1-216ENST00000473714 PDIA6Q15084 440 aa5.34□□□□□ -1.55
CALD1-216ENST00000473714 LMOD2Q6P5Q4 547 aa5.34□□□□□ -1.55
CALD1-216ENST00000473714 CRIPAKQ8N1N5 446 aa5.34□□□□□ -1.55
CALD1-216ENST00000473714 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
CALD1-216ENST00000473714 GMPR2Q9P2T1 348 aaKnown RBP5.34□□□□□ -1.55
CALD1-216ENST00000473714 DACH1Q9UI36 760 aa5.34□□□□□ -1.55
CALD1-216ENST00000473714 FAM181BA6NEQ2 426 aa5.33□□□□□ -1.56
CALD1-216ENST00000473714 GRXCR2A6NFK2 248 aa5.33□□□□□ -1.56
CALD1-216ENST00000473714 TLL1O43897 1013 aa5.33□□□□□ -1.56
CALD1-216ENST00000473714 RTN4Q9NQC3 1192 aaKnown RBP5.33□□□□□ -1.56
CALD1-216ENST00000473714 CTC1Q2NKJ3 1217 aa5.31□□□□□ -1.56
CALD1-216ENST00000473714 AVPP01185 164 aa5.3□□□□□ -1.56
CALD1-216ENST00000473714 PRIM1P49642 420 aaKnown RBP5.3□□□□□ -1.56
CALD1-216ENST00000473714 CYP4X1Q8N118 509 aa5.3□□□□□ -1.56
CALD1-216ENST00000473714 SLC6A16Q9GZN6 736 aa5.3□□□□□ -1.56
CALD1-216ENST00000473714 PKD2L1Q9P0L9 805 aa5.3□□□□□ -1.56
CALD1-216ENST00000473714 CECR2Q9BXF3 1484 aa5.29□□□□□ -1.56
CALD1-216ENST00000473714 TERTO14746 1132 aaKnown RBP5.29□□□□□ -1.56
CALD1-216ENST00000473714 ADH1BP00325 375 aa5.29□□□□□ -1.56
CALD1-216ENST00000473714 KMT5BQ4FZB7 885 aa5.29□□□□□ -1.56
CALD1-216ENST00000473714 TTC13Q8NBP0 860 aa5.29□□□□□ -1.56
CALD1-216ENST00000473714 CDHR5Q9HBB8 845 aa5.29□□□□□ -1.56
CALD1-216ENST00000473714 CUX2O14529 1486 aa5.28□□□□□ -1.56
CALD1-216ENST00000473714 NR1I2O75469 434 aa5.28□□□□□ -1.56
CALD1-216ENST00000473714 CD2BP2O95400 341 aaKnown RBP5.28□□□□□ -1.56
CALD1-216ENST00000473714 PADI6Q6TGC4 694 aa5.28□□□□□ -1.56
CALD1-216ENST00000473714 EYA1Q99502 592 aa5.28□□□□□ -1.56
CALD1-216ENST00000473714 ACTN4O43707 911 aaKnown RBP5.27□□□□□ -1.57
CALD1-216ENST00000473714 SMCPP49901 116 aaPredicted RBP5.27□□□□□ -1.57
CALD1-216ENST00000473714 PLA2G2CQ5R387 149 aa5.27□□□□□ -1.57
CALD1-216ENST00000473714 TOR4AQ9NXH8 423 aa5.27□□□□□ -1.57
CALD1-216ENST00000473714 OSBPP22059 807 aa5.26□□□□□ -1.57
CALD1-216ENST00000473714 RPIAP49247 311 aa5.26□□□□□ -1.57
CALD1-216ENST00000473714 TTC24A2A3L6 582 aaPredicted RBP5.25□□□□□ -1.57
CALD1-216ENST00000473714 SENP2Q9HC62 589 aa5.25□□□□□ -1.57
CALD1-216ENST00000473714 CFHP08603 1231 aa5.24□□□□□ -1.57
CALD1-216ENST00000473714 SNRPBP14678 240 aaKnown RBP5.24□□□□□ -1.57
CALD1-216ENST00000473714 DNAJB2P25686 324 aa5.24□□□□□ -1.57
CALD1-216ENST00000473714 SLC16A10Q8TF71 515 aa5.24□□□□□ -1.57
CALD1-216ENST00000473714 NPDC1Q9NQX5 325 aaPredicted RBP5.24□□□□□ -1.57
CALD1-216ENST00000473714 RB1CC1Q8TDY2 1594 aa5.24□□□□□ -1.57
CALD1-216ENST00000473714 DCAF8L2P0C7V8 631 aa5.23□□□□□ -1.57
CALD1-216ENST00000473714 SCUBE3Q8IX30 993 aa5.23□□□□□ -1.57
CALD1-216ENST00000473714 ATP13A2Q9NQ11 1180 aa5.23□□□□□ -1.57
CALD1-216ENST00000473714 SUZ12Q15022 739 aaKnown RBP5.22□□□□□ -1.57
CALD1-216ENST00000473714 LCE2CQ5TA81 110 aa5.22□□□□□ -1.57
CALD1-216ENST00000473714 ZSCAN1Q8NBB4 408 aa5.22□□□□□ -1.57
CALD1-216ENST00000473714 RBM46Q8TBY0 533 aaKnown RBP5.22□□□□□ -1.57
CALD1-216ENST00000473714 TRIM47Q96LD4 638 aa5.22□□□□□ -1.57
CALD1-216ENST00000473714 SPSB2Q99619 263 aa5.22□□□□□ -1.57
CALD1-216ENST00000473714 E2F4Q16254 413 aa5.21□□□□□ -1.58
CALD1-216ENST00000473714 TMEM134Q9H6X4 195 aa5.21□□□□□ -1.58
CALD1-216ENST00000473714 KIFC2Q96AC6 838 aa5.2□□□□□ -1.58
CALD1-216ENST00000473714 ARIH1Q9Y4X5 557 aaPredicted RBP5.2□□□□□ -1.58
CALD1-216ENST00000473714 ZBTB24O43167 697 aaPredicted RBP5.19□□□□□ -1.58
CALD1-216ENST00000473714 FCF1Q9Y324 198 aaKnown RBP5.19□□□□□ -1.58
CALD1-216ENST00000473714 CC2D2AQ9P2K1 1620 aa5.19□□□□□ -1.58
CALD1-216ENST00000473714 RSPH4AQ5TD94 716 aa5.18□□□□□ -1.58
CALD1-216ENST00000473714 SNIP1Q8TAD8 396 aaKnown RBP5.18□□□□□ -1.58
CALD1-216ENST00000473714 UNC13AQ9UPW8 1703 aa5.17□□□□□ -1.58
CALD1-216ENST00000473714 CCDC180Q9P1Z9 1646 aa5.17□□□□□ -1.58
CALD1-216ENST00000473714 RCCD1A6NED2 376 aa5.17□□□□□ -1.58
CALD1-216ENST00000473714 SMPD1P17405 629 aa5.17□□□□□ -1.58
CALD1-216ENST00000473714 GMPRP36959 345 aa5.17□□□□□ -1.58
CALD1-216ENST00000473714 IRF7Q92985 503 aa5.17□□□□□ -1.58
CALD1-216ENST00000473714 WDR70Q9NW82 654 aa5.17□□□□□ -1.58
CALD1-216ENST00000473714 NXF1Q9UBU9 619 aaKnown RBP5.17□□□□□ -1.58
CALD1-216ENST00000473714 SLC10A3P09131 477 aa5.16□□□□□ -1.58
CALD1-216ENST00000473714 PUS10Q3MIT2 529 aaKnown RBP5.16□□□□□ -1.58
CALD1-216ENST00000473714 WNT7AO00755 349 aa5.15□□□□□ -1.59
CALD1-216ENST00000473714 ADGRG1Q9Y653 693 aa5.15□□□□□ -1.59
CALD1-216ENST00000473714 LORP23490 312 aaPredicted RBP5.14□□□□□ -1.59
CALD1-216ENST00000473714 NPAS3Q8IXF0 933 aa5.14□□□□□ -1.59
CALD1-216ENST00000473714 J3QL48 77 aa5.13□□□□□ -1.59
CALD1-216ENST00000473714 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.12□□□□□ -1.59
CALD1-216ENST00000473714 FMNL1O95466 1100 aaPredicted RBP5.12□□□□□ -1.59
CALD1-216ENST00000473714 HPS1Q92902 700 aa5.12□□□□□ -1.59
CALD1-216ENST00000473714 MRGPRX2Q96LB1 330 aa5.12□□□□□ -1.59
CALD1-216ENST00000473714 PTGDRQ13258 359 aa5.11□□□□□ -1.59
CALD1-216ENST00000473714 FAM161AQ3B820 660 aa5.11□□□□□ -1.59
CALD1-216ENST00000473714 FAM160A2Q8N612 972 aaPredicted RBP5.11□□□□□ -1.59
CALD1-216ENST00000473714 BICRAQ9NZM4 1560 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms