RNA–Protein interactions for RNA: ENST00000473644.1

PGBD4P1-201, Transcript of piggyBac transposable element derived 4 pseudogene 1, humanhuman

BASIC

Gene PGBD4P1, Length 407 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P1-201ENST00000473644 CDC42BPBQ9Y5S2 1711 aa10.84□□□□□ -0.67
PGBD4P1-201ENST00000473644 RIOK3O14730 519 aaKnown RBP10.83□□□□□ -0.68
PGBD4P1-201ENST00000473644 ANKLE2Q86XL3 938 aa10.83□□□□□ -0.68
PGBD4P1-201ENST00000473644 ITSN2Q9NZM3 1697 aa10.82□□□□□ -0.68
PGBD4P1-201ENST00000473644 POLR1AO95602 1720 aaPredicted RBP10.82□□□□□ -0.68
PGBD4P1-201ENST00000473644 CEP162Q5TB80 1403 aa10.82□□□□□ -0.68
PGBD4P1-201ENST00000473644 PLXNC1O60486 1568 aa10.82□□□□□ -0.68
PGBD4P1-201ENST00000473644 SAMD9LQ8IVG5 1584 aa10.82□□□□□ -0.68
PGBD4P1-201ENST00000473644 SETD1AO15047 1707 aaKnown RBP10.81□□□□□ -0.68
PGBD4P1-201ENST00000473644 RNF17Q9BXT8 1623 aaKnown RBP10.81□□□□□ -0.68
PGBD4P1-201ENST00000473644 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.81□□□□□ -0.68
PGBD4P1-201ENST00000473644 POTEJP0CG39 1038 aa10.81□□□□□ -0.68
PGBD4P1-201ENST00000473644 ZNF467Q7Z7K2 595 aaPredicted RBP10.81□□□□□ -0.68
PGBD4P1-201ENST00000473644 RNF25Q96BH1 459 aaPredicted RBP10.81□□□□□ -0.68
PGBD4P1-201ENST00000473644 SGIP1Q9BQI5 828 aa10.81□□□□□ -0.68
PGBD4P1-201ENST00000473644 NPHP4O75161 1426 aaPredicted RBP10.81□□□□□ -0.68
PGBD4P1-201ENST00000473644 STRCP1A6NGW2 1772 aa10.8□□□□□ -0.68
PGBD4P1-201ENST00000473644 TIE1P35590 1138 aa10.8□□□□□ -0.68
PGBD4P1-201ENST00000473644 GGT6Q6P531 493 aa10.8□□□□□ -0.68
PGBD4P1-201ENST00000473644 PCDHB13Q9Y5F0 798 aa10.8□□□□□ -0.68
PGBD4P1-201ENST00000473644 FAM135BQ49AJ0 1406 aa10.8□□□□□ -0.68
PGBD4P1-201ENST00000473644 FBXO31Q5XUX0 539 aaPredicted RBP10.79□□□□□ -0.68
PGBD4P1-201ENST00000473644 DEPDC5O75140 1603 aa10.78□□□□□ -0.68
PGBD4P1-201ENST00000473644 THEMISQ8N1K5 641 aaPredicted RBP10.78□□□□□ -0.68
PGBD4P1-201ENST00000473644 A2MP01023 1474 aa10.78□□□□□ -0.68
PGBD4P1-201ENST00000473644 SPAG9O60271 1321 aaKnown RBP10.78□□□□□ -0.68
PGBD4P1-201ENST00000473644 TNRQ92752 1358 aa10.77□□□□□ -0.68
PGBD4P1-201ENST00000473644 PREX2Q70Z35 1606 aa10.77□□□□□ -0.68
PGBD4P1-201ENST00000473644 CLIP1P30622 1438 aa10.77□□□□□ -0.68
PGBD4P1-201ENST00000473644 POTEFA5A3E0 1075 aa10.77□□□□□ -0.69
PGBD4P1-201ENST00000473644 TTLL13PA6NNM8 815 aa10.77□□□□□ -0.69
PGBD4P1-201ENST00000473644 VGFO15240 615 aaPredicted RBP10.77□□□□□ -0.69
PGBD4P1-201ENST00000473644 IFNL1Q8IU54 200 aa10.77□□□□□ -0.69
PGBD4P1-201ENST00000473644 SYNMO15061 1565 aa10.77□□□□□ -0.69
PGBD4P1-201ENST00000473644 ATP1B4Q9UN42 357 aaPredicted RBP10.76□□□□□ -0.69
PGBD4P1-201ENST00000473644 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
PGBD4P1-201ENST00000473644 UBTFP17480 764 aaKnown RBP10.74□□□□□ -0.69
PGBD4P1-201ENST00000473644 HNRNPMP52272 730 aaKnown RBP eCLIP10.74□□□□□ -0.69
PGBD4P1-201ENST00000473644 MIA2Q96PC5 1412 aa10.74□□□□□ -0.69
PGBD4P1-201ENST00000473644 PZPP20742 1482 aa10.74□□□□□ -0.69
PGBD4P1-201ENST00000473644 ATP7AQ04656 1500 aa10.74□□□□□ -0.69
PGBD4P1-201ENST00000473644 IQGAP1P46940 1657 aa10.73□□□□□ -0.69
PGBD4P1-201ENST00000473644 NLRP1Q9C000 1473 aa10.73□□□□□ -0.69
PGBD4P1-201ENST00000473644 UGGT1Q9NYU2 1555 aa10.73□□□□□ -0.69
PGBD4P1-201ENST00000473644 INO80Q9ULG1 1556 aaPredicted RBP10.73□□□□□ -0.69
PGBD4P1-201ENST00000473644 PCDHB8Q9UN66 801 aa10.72□□□□□ -0.69
PGBD4P1-201ENST00000473644 KIAA1107Q9UPP5 1409 aa10.72□□□□□ -0.69
PGBD4P1-201ENST00000473644 PDAP1Q13442 181 aaKnown RBP10.71□□□□□ -0.69
PGBD4P1-201ENST00000473644 SYCP2Q9BX26 1530 aa10.71□□□□□ -0.69
PGBD4P1-201ENST00000473644 FAM135AQ9P2D6 1515 aa10.71□□□□□ -0.69
PGBD4P1-201ENST00000473644 CHGAP10645 457 aaKnown RBP10.7□□□□□ -0.7
PGBD4P1-201ENST00000473644 HS6ST3Q8IZP7 471 aa10.7□□□□□ -0.7
PGBD4P1-201ENST00000473644 COLQQ9Y215 455 aaPredicted RBP10.7□□□□□ -0.7
PGBD4P1-201ENST00000473644 ARHGAP35Q9NRY4 1499 aa10.69□□□□□ -0.7
PGBD4P1-201ENST00000473644 ZNF777Q9ULD5 760 aaPredicted RBP10.69□□□□□ -0.7
PGBD4P1-201ENST00000473644 TRIM35Q9UPQ4 493 aa10.69□□□□□ -0.7
PGBD4P1-201ENST00000473644 XIRP1Q702N8 1843 aaKnown RBP10.69□□□□□ -0.7
PGBD4P1-201ENST00000473644 CDC42BPAQ5VT25 1732 aa10.69□□□□□ -0.7
PGBD4P1-201ENST00000473644 LRRIQ1Q96JM4 1722 aa10.69□□□□□ -0.7
PGBD4P1-201ENST00000473644 ZC3H13Q5T200 1668 aaKnown RBP10.69□□□□□ -0.7
PGBD4P1-201ENST00000473644 GPATCH8Q9UKJ3 1502 aaKnown RBP10.68□□□□□ -0.7
PGBD4P1-201ENST00000473644 TRIM52Q96A61 297 aa10.68□□□□□ -0.7
PGBD4P1-201ENST00000473644 KDM5DQ9BY66 1539 aa10.68□□□□□ -0.7
PGBD4P1-201ENST00000473644 DHX29Q7Z478 1369 aaKnown RBP10.67□□□□□ -0.7
PGBD4P1-201ENST00000473644 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.67□□□□□ -0.7
PGBD4P1-201ENST00000473644 STK25O00506 426 aa10.67□□□□□ -0.7
PGBD4P1-201ENST00000473644 ZFP91Q96JP5 570 aaPredicted RBP10.67□□□□□ -0.7
PGBD4P1-201ENST00000473644 TMEM106CQ9BVX2 250 aa10.67□□□□□ -0.7
PGBD4P1-201ENST00000473644 JCADQ9P266 1359 aa10.66□□□□□ -0.7
PGBD4P1-201ENST00000473644 ZNF772Q68DY9 489 aaPredicted RBP10.66□□□□□ -0.7
PGBD4P1-201ENST00000473644 ROBO1Q9Y6N7 1651 aa10.66□□□□□ -0.7
PGBD4P1-201ENST00000473644 LTKP29376 864 aa10.65□□□□□ -0.7
PGBD4P1-201ENST00000473644 PSEN1P49768 467 aa10.65□□□□□ -0.7
PGBD4P1-201ENST00000473644 MAMSTRQ6ZN01 415 aa10.65□□□□□ -0.7
PGBD4P1-201ENST00000473644 VPS8Q8N3P4 1428 aa10.65□□□□□ -0.7
PGBD4P1-201ENST00000473644 LRP6O75581 1613 aa10.65□□□□□ -0.7
PGBD4P1-201ENST00000473644 WASHC2CQ9Y4E1 1318 aa10.64□□□□□ -0.71
PGBD4P1-201ENST00000473644 ADGBQ8N7X0 1667 aa10.64□□□□□ -0.71
PGBD4P1-201ENST00000473644 PLEKHH2Q8IVE3 1493 aa10.64□□□□□ -0.71
PGBD4P1-201ENST00000473644 CDK12Q9NYV4 1490 aaPredicted RBP10.64□□□□□ -0.71
PGBD4P1-201ENST00000473644 RTEL1-TNFRSF6BF6WH68 1400 aa10.64□□□□□ -0.71
PGBD4P1-201ENST00000473644 TMEM94Q12767 1356 aa10.64□□□□□ -0.71
PGBD4P1-201ENST00000473644 KIF3BO15066 747 aa10.63□□□□□ -0.71
PGBD4P1-201ENST00000473644 SEC24BO95487 1268 aa10.63□□□□□ -0.71
PGBD4P1-201ENST00000473644 RXRBP28702 533 aa10.63□□□□□ -0.71
PGBD4P1-201ENST00000473644 IER5LQ5T953 404 aa10.63□□□□□ -0.71
PGBD4P1-201ENST00000473644 PPARGC1BQ86YN6 1023 aaKnown RBP10.63□□□□□ -0.71
PGBD4P1-201ENST00000473644 BBXQ8WY36 941 aaPredicted RBP10.63□□□□□ -0.71
PGBD4P1-201ENST00000473644 BCL11BQ9C0K0 894 aaPredicted RBP10.63□□□□□ -0.71
PGBD4P1-201ENST00000473644 MAP3K1Q13233 1512 aa10.63□□□□□ -0.71
PGBD4P1-201ENST00000473644 SCAF11Q99590 1463 aaKnown RBP10.62□□□□□ -0.71
PGBD4P1-201ENST00000473644 ARHGAP23Q9P227 1491 aa10.62□□□□□ -0.71
PGBD4P1-201ENST00000473644 MBD5Q9P267 1494 aa10.62□□□□□ -0.71
PGBD4P1-201ENST00000473644 STK24Q9Y6E0 443 aa10.62□□□□□ -0.71
PGBD4P1-201ENST00000473644 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
PGBD4P1-201ENST00000473644 SPATA31A6Q5VVP1 1343 aa10.61□□□□□ -0.71
PGBD4P1-201ENST00000473644 CFDP1Q9UEE9 299 aaPredicted RBP10.61□□□□□ -0.71
PGBD4P1-201ENST00000473644 CCDC18Q5T9S5 1454 aa10.61□□□□□ -0.71
PGBD4P1-201ENST00000473644 LRRC9Q6ZRR7 1453 aa10.61□□□□□ -0.71
PGBD4P1-201ENST00000473644 SLIT1O75093 1534 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms