RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 ZNF521Q96K83 1311 aa18.55■□□□□ 0.56
NHLRC3-204ENST00000473371 RGS3P49796 1198 aa18.55■□□□□ 0.56
NHLRC3-204ENST00000473371 C8orf34Q49A92 452 aa18.55■□□□□ 0.56
NHLRC3-204ENST00000473371 UHRF1BP1LA0JNW5 1464 aa18.54■□□□□ 0.56
NHLRC3-204ENST00000473371 AMER1Q5JTC6 1135 aaPredicted RBP18.54■□□□□ 0.56
NHLRC3-204ENST00000473371 RNF17Q9BXT8 1623 aaKnown RBP18.53■□□□□ 0.56
NHLRC3-204ENST00000473371 ATP10AO60312 1499 aa18.53■□□□□ 0.56
NHLRC3-204ENST00000473371 SLFN5Q08AF3 891 aa18.53■□□□□ 0.56
NHLRC3-204ENST00000473371 CDCA8Q53HL2 280 aa18.52■□□□□ 0.56
NHLRC3-204ENST00000473371 PLXNC1O60486 1568 aa18.51■□□□□ 0.55
NHLRC3-204ENST00000473371 CCDC146Q8IYE0 955 aa18.51■□□□□ 0.55
NHLRC3-204ENST00000473371 TTC37Q6PGP7 1564 aa18.51■□□□□ 0.55
NHLRC3-204ENST00000473371 DUOX2Q9NRD8 1548 aa18.5■□□□□ 0.55
NHLRC3-204ENST00000473371 ERCC6L2Q5T890 1561 aa18.49■□□□□ 0.55
NHLRC3-204ENST00000473371 ASXL1Q8IXJ9 1541 aa18.48■□□□□ 0.55
NHLRC3-204ENST00000473371 FRAT1Q92837 279 aaPredicted RBP18.48■□□□□ 0.55
NHLRC3-204ENST00000473371 BRPF3Q9ULD4 1205 aa18.48■□□□□ 0.55
NHLRC3-204ENST00000473371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.48■□□□□ 0.55
NHLRC3-204ENST00000473371 PIK3C2GO75747 1445 aa18.48■□□□□ 0.55
NHLRC3-204ENST00000473371 SYNMO15061 1565 aa18.47■□□□□ 0.55
NHLRC3-204ENST00000473371 APAF1O14727 1248 aa18.46■□□□□ 0.55
NHLRC3-204ENST00000473371 IQGAP1P46940 1657 aa18.46■□□□□ 0.55
NHLRC3-204ENST00000473371 EIF3AQ14152 1382 aaKnown RBP18.46■□□□□ 0.55
NHLRC3-204ENST00000473371 PRKCSHP14314 528 aaPredicted RBP18.46■□□□□ 0.55
NHLRC3-204ENST00000473371 TRMT2AQ8IZ69 625 aaKnown RBP18.46■□□□□ 0.55
NHLRC3-204ENST00000473371 MADDQ8WXG6 1647 aa18.45■□□□□ 0.54
NHLRC3-204ENST00000473371 SPINK5Q9NQ38 1064 aaPredicted RBP18.45■□□□□ 0.54
NHLRC3-204ENST00000473371 NKTRP30414 1462 aaKnown RBP18.44■□□□□ 0.54
NHLRC3-204ENST00000473371 SCAF11Q99590 1463 aaKnown RBP18.44■□□□□ 0.54
NHLRC3-204ENST00000473371 BCAR3O75815 825 aa18.44■□□□□ 0.54
NHLRC3-204ENST00000473371 FRAT2O75474 233 aaPredicted RBP18.42■□□□□ 0.54
NHLRC3-204ENST00000473371 E9PSI1 815 aa18.42■□□□□ 0.54
NHLRC3-204ENST00000473371 ABCC2Q92887 1545 aa18.41■□□□□ 0.54
NHLRC3-204ENST00000473371 NPC1L1Q9UHC9 1359 aa18.41■□□□□ 0.54
NHLRC3-204ENST00000473371 IGHDP01880 384 aa18.39■□□□□ 0.53
NHLRC3-204ENST00000473371 SCAPERQ9BY12 1400 aa18.39■□□□□ 0.53
NHLRC3-204ENST00000473371 STAC3Q96MF2 364 aa18.38■□□□□ 0.53
NHLRC3-204ENST00000473371 CANXP27824 592 aaKnown RBP18.38■□□□□ 0.53
NHLRC3-204ENST00000473371 SPHKAPQ2M3C7 1700 aa18.38■□□□□ 0.53
NHLRC3-204ENST00000473371 EFCAB2Q5VUJ9 269 aa18.38■□□□□ 0.53
NHLRC3-204ENST00000473371 ZCCHC11Q5TAX3 1644 aaKnown RBP18.37■□□□□ 0.53
NHLRC3-204ENST00000473371 MYOM1P52179 1685 aa18.37■□□□□ 0.53
NHLRC3-204ENST00000473371 CGNL1Q0VF96 1302 aa18.37■□□□□ 0.53
NHLRC3-204ENST00000473371 DMRT2Q9Y5R5 561 aa18.36■□□□□ 0.53
NHLRC3-204ENST00000473371 PDE3AQ14432 1141 aa18.35■□□□□ 0.53
NHLRC3-204ENST00000473371 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.35■□□□□ 0.53
NHLRC3-204ENST00000473371 CENPJQ9HC77 1338 aaPredicted RBP18.35■□□□□ 0.53
NHLRC3-204ENST00000473371 TRPM2O94759 1503 aa18.35■□□□□ 0.53
NHLRC3-204ENST00000473371 KDM5AP29375 1690 aaKnown RBP18.35■□□□□ 0.53
NHLRC3-204ENST00000473371 NGEFQ8N5V2 710 aa18.35■□□□□ 0.53
NHLRC3-204ENST00000473371 CEP152O94986 1710 aa18.34■□□□□ 0.53
NHLRC3-204ENST00000473371 CLUAP1Q96AJ1 413 aa18.34■□□□□ 0.53
NHLRC3-204ENST00000473371 COG6Q9Y2V7 657 aa18.34■□□□□ 0.53
NHLRC3-204ENST00000473371 PLCH2O75038 1416 aa18.33■□□□□ 0.53
NHLRC3-204ENST00000473371 TRAPPC8Q9Y2L5 1435 aa18.33■□□□□ 0.52
NHLRC3-204ENST00000473371 MAPK8IP3Q9UPT6 1336 aa18.33■□□□□ 0.52
NHLRC3-204ENST00000473371 PANK1Q8TE04 598 aa18.33■□□□□ 0.52
NHLRC3-204ENST00000473371 USP19O94966 1318 aa18.32■□□□□ 0.52
NHLRC3-204ENST00000473371 CLTCL1P53675 1640 aa18.32■□□□□ 0.52
NHLRC3-204ENST00000473371 SPAG9O60271 1321 aaKnown RBP18.32■□□□□ 0.52
NHLRC3-204ENST00000473371 NINLQ9Y2I6 1382 aa18.31■□□□□ 0.52
NHLRC3-204ENST00000473371 VIRMAQ69YN4 1812 aaKnown RBP18.31■□□□□ 0.52
NHLRC3-204ENST00000473371 BECN1Q14457 450 aa18.31■□□□□ 0.52
NHLRC3-204ENST00000473371 PTPRTO14522 1441 aa18.31■□□□□ 0.52
NHLRC3-204ENST00000473371 CARD14Q9BXL6 1004 aa18.3■□□□□ 0.52
NHLRC3-204ENST00000473371 SEC24BO95487 1268 aa18.3■□□□□ 0.52
NHLRC3-204ENST00000473371 CFAP70Q5T0N1 1121 aa18.29■□□□□ 0.52
NHLRC3-204ENST00000473371 WWC1Q8IX03 1113 aa18.29■□□□□ 0.52
NHLRC3-204ENST00000473371 ABCC1P33527 1531 aa18.29■□□□□ 0.52
NHLRC3-204ENST00000473371 ERVK-7P63135 1459 aa18.28■□□□□ 0.52
NHLRC3-204ENST00000473371 NEUROD2Q15784 382 aa18.27■□□□□ 0.52
NHLRC3-204ENST00000473371 AFAP1Q8N556 730 aa18.27■□□□□ 0.52
NHLRC3-204ENST00000473371 ARAP3Q8WWN8 1544 aa18.26■□□□□ 0.51
NHLRC3-204ENST00000473371 KIAA1210Q9ULL0 1709 aa18.26■□□□□ 0.51
NHLRC3-204ENST00000473371 SLKQ9H2G2 1235 aaPredicted RBP18.26■□□□□ 0.51
NHLRC3-204ENST00000473371 KANK1Q14678 1352 aa18.26■□□□□ 0.51
NHLRC3-204ENST00000473371 POLR3AO14802 1390 aaPredicted RBP18.25■□□□□ 0.51
NHLRC3-204ENST00000473371 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
NHLRC3-204ENST00000473371 RRP7AQ9Y3A4 280 aaKnown RBP18.24■□□□□ 0.51
NHLRC3-204ENST00000473371 UPF2Q9HAU5 1272 aaKnown RBP18.24■□□□□ 0.51
NHLRC3-204ENST00000473371 RIMBP3CA6NJZ7 1639 aa18.24■□□□□ 0.51
NHLRC3-204ENST00000473371 RIMBP3BA6NNM3 1639 aa18.24■□□□□ 0.51
NHLRC3-204ENST00000473371 RIMBP3Q9UFD9 1639 aa18.24■□□□□ 0.51
NHLRC3-204ENST00000473371 TET3O43151 1660 aa18.23■□□□□ 0.51
NHLRC3-204ENST00000473371 RTEL1-TNFRSF6BF6WH68 1400 aa18.23■□□□□ 0.51
NHLRC3-204ENST00000473371 ADGRF5Q8IZF2 1346 aa18.23■□□□□ 0.51
NHLRC3-204ENST00000473371 RARSP54136 660 aaKnown RBP18.23■□□□□ 0.51
NHLRC3-204ENST00000473371 MORC1Q86VD1 984 aa18.23■□□□□ 0.51
NHLRC3-204ENST00000473371 POGKQ9P215 609 aa18.23■□□□□ 0.51
NHLRC3-204ENST00000473371 TNNT2P45379 298 aaPredicted RBP18.22■□□□□ 0.51
NHLRC3-204ENST00000473371 RUNDC1Q96C34 613 aa18.21■□□□□ 0.51
NHLRC3-204ENST00000473371 ZFYVE16Q7Z3T8 1539 aa18.21■□□□□ 0.51
NHLRC3-204ENST00000473371 ABCA9Q8IUA7 1624 aa18.21■□□□□ 0.5
NHLRC3-204ENST00000473371 MAP3K4Q9Y6R4 1608 aa18.2■□□□□ 0.5
NHLRC3-204ENST00000473371 KIF3BO15066 747 aa18.2■□□□□ 0.5
NHLRC3-204ENST00000473371 AAMPQ13685 434 aa18.2■□□□□ 0.5
NHLRC3-204ENST00000473371 PCDHB15Q9Y5E8 787 aa18.2■□□□□ 0.5
NHLRC3-204ENST00000473371 ABCA6Q8N139 1617 aa18.2■□□□□ 0.5
NHLRC3-204ENST00000473371 TCP11L2Q8N4U5 519 aa18.2■□□□□ 0.5
NHLRC3-204ENST00000473371 NLRP1Q9C000 1473 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms