RNA–Protein interactions for RNA: ENST00000473208.5

RYK-203, Transcript of receptor-like tyrosine kinase, humanhuman

TSL 1 (best)

Gene RYK, Length 5,270 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RYK-203ENST00000473208 CHMP4BQ9H444 224 aaKnown RBP8.71□□□□□ -1.01
RYK-203ENST00000473208 PANK3Q9H999 370 aa8.71□□□□□ -1.01
RYK-203ENST00000473208 WASHC2AQ641Q2 1341 aa8.71□□□□□ -1.01
RYK-203ENST00000473208 ANP32BQ92688 251 aaKnown RBP8.71□□□□□ -1.01
RYK-203ENST00000473208 MLH3Q9UHC1 1453 aa8.71□□□□□ -1.02
RYK-203ENST00000473208 ATF3P18847 181 aa8.71□□□□□ -1.02
RYK-203ENST00000473208 EIF2AK4Q9P2K8 1649 aaKnown RBP8.71□□□□□ -1.02
RYK-203ENST00000473208 NOP58Q9Y2X3 529 aaKnown RBP8.7□□□□□ -1.02
RYK-203ENST00000473208 MBD5Q9P267 1494 aa8.7□□□□□ -1.02
RYK-203ENST00000473208 TSHZ2Q9NRE2 1034 aa8.69□□□□□ -1.02
RYK-203ENST00000473208 ATAD2Q6PL18 1390 aa8.69□□□□□ -1.02
RYK-203ENST00000473208 DEKP35659 375 aaKnown RBP8.69□□□□□ -1.02
RYK-203ENST00000473208 HECW2Q9P2P5 1572 aa8.69□□□□□ -1.02
RYK-203ENST00000473208 RBM19Q9Y4C8 960 aaKnown RBP8.69□□□□□ -1.02
RYK-203ENST00000473208 LMOD3Q0VAK6 560 aa8.69□□□□□ -1.02
RYK-203ENST00000473208 ARHGEF12Q9NZN5 1544 aa8.69□□□□□ -1.02
RYK-203ENST00000473208 NGEFQ8N5V2 710 aa8.68□□□□□ -1.02
RYK-203ENST00000473208 RTF1Q92541 710 aaKnown RBP8.68□□□□□ -1.02
RYK-203ENST00000473208 PLEKHG5O94827 1062 aa8.68□□□□□ -1.02
RYK-203ENST00000473208 MYH16Q9H6N6 1097 aa8.68□□□□□ -1.02
RYK-203ENST00000473208 ABCA9Q8IUA7 1624 aa8.68□□□□□ -1.02
RYK-203ENST00000473208 KIF7Q2M1P5 1343 aa8.68□□□□□ -1.02
RYK-203ENST00000473208 DMRT2Q9Y5R5 561 aa8.68□□□□□ -1.02
RYK-203ENST00000473208 RIMBP3CA6NJZ7 1639 aa8.67□□□□□ -1.02
RYK-203ENST00000473208 RIMBP3BA6NNM3 1639 aa8.67□□□□□ -1.02
RYK-203ENST00000473208 RIMBP3Q9UFD9 1639 aa8.67□□□□□ -1.02
RYK-203ENST00000473208 IDI1Q13907 227 aa8.67□□□□□ -1.02
RYK-203ENST00000473208 ZNF692Q9BU19 519 aaPredicted RBP8.67□□□□□ -1.02
RYK-203ENST00000473208 GPRASP1Q5JY77 1395 aa8.67□□□□□ -1.02
RYK-203ENST00000473208 AMPHP49418 695 aa8.67□□□□□ -1.02
RYK-203ENST00000473208 PLXNC1O60486 1568 aa8.67□□□□□ -1.02
RYK-203ENST00000473208 TMEM132EQ6IEE7 984 aa8.67□□□□□ -1.02
RYK-203ENST00000473208 PPP4R2Q9NY27 417 aa8.67□□□□□ -1.02
RYK-203ENST00000473208 SCAF11Q99590 1463 aaKnown RBP8.67□□□□□ -1.02
RYK-203ENST00000473208 PSME1Q06323 249 aa8.67□□□□□ -1.02
RYK-203ENST00000473208 PRAM1Q96QH2 718 aa8.67□□□□□ -1.02
RYK-203ENST00000473208 KDM5DQ9BY66 1539 aa8.66□□□□□ -1.02
RYK-203ENST00000473208 U2AF1L5P0DN76 240 aaPredicted RBP8.66□□□□□ -1.02
RYK-203ENST00000473208 U2AF1Q01081 240 aaKnown RBP eCLIP8.66□□□□□ -1.02
RYK-203ENST00000473208 PROSER2Q86WR7 435 aaPredicted RBP8.66□□□□□ -1.02
RYK-203ENST00000473208 CDC42BPAQ5VT25 1732 aa8.66□□□□□ -1.02
RYK-203ENST00000473208 CSB-PGBD3P0DP91 1061 aa8.66□□□□□ -1.02
RYK-203ENST00000473208 NBPF8Q3BBV2 869 aa8.66□□□□□ -1.02
RYK-203ENST00000473208 ERICH6BQ5W0A0 696 aa8.66□□□□□ -1.02
RYK-203ENST00000473208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.66□□□□□ -1.02
RYK-203ENST00000473208 NOS1P29475 1434 aa8.65□□□□□ -1.02
RYK-203ENST00000473208 PDE3BQ13370 1112 aa8.65□□□□□ -1.02
RYK-203ENST00000473208 UPF2Q9HAU5 1272 aaKnown RBP8.65□□□□□ -1.02
RYK-203ENST00000473208 PZPP20742 1482 aa8.65□□□□□ -1.02
RYK-203ENST00000473208 PRKRIP1Q9H875 184 aaPredicted RBP8.65□□□□□ -1.02
RYK-203ENST00000473208 NINLQ9Y2I6 1382 aa8.65□□□□□ -1.03
RYK-203ENST00000473208 C14orf93Q9H972 538 aaKnown RBP8.65□□□□□ -1.03
RYK-203ENST00000473208 ZMYM3Q14202 1370 aa8.64□□□□□ -1.03
RYK-203ENST00000473208 RALGAPBQ86X10 1494 aa8.64□□□□□ -1.03
RYK-203ENST00000473208 SOX12O15370 315 aa8.64□□□□□ -1.03
RYK-203ENST00000473208 NBPF1Q3BBV0 1214 aa8.64□□□□□ -1.03
RYK-203ENST00000473208 FBXO31Q5XUX0 539 aaPredicted RBP8.64□□□□□ -1.03
RYK-203ENST00000473208 IRX6P78412 446 aaPredicted RBP8.64□□□□□ -1.03
RYK-203ENST00000473208 NEUROD2Q15784 382 aa8.63□□□□□ -1.03
RYK-203ENST00000473208 DNAJC5Q9H3Z4 198 aa8.63□□□□□ -1.03
RYK-203ENST00000473208 RIMS2Q9UQ26 1411 aa8.63□□□□□ -1.03
RYK-203ENST00000473208 A0A0G2JS52 829 aa8.63□□□□□ -1.03
RYK-203ENST00000473208 CDK19Q9BWU1 502 aa8.62□□□□□ -1.03
RYK-203ENST00000473208 CABP2Q9NPB3 220 aa8.62□□□□□ -1.03
RYK-203ENST00000473208 FTSJ3Q8IY81 847 aaKnown RBP8.62□□□□□ -1.03
RYK-203ENST00000473208 GLI2P10070 1586 aa8.62□□□□□ -1.03
RYK-203ENST00000473208 NUTM2FA1L443 756 aa8.62□□□□□ -1.03
RYK-203ENST00000473208 LAS1LQ9Y4W2 734 aaKnown RBP8.62□□□□□ -1.03
RYK-203ENST00000473208 BRD4O60885 1362 aaPredicted RBP8.62□□□□□ -1.03
RYK-203ENST00000473208 PRAG1Q86YV5 1406 aa8.61□□□□□ -1.03
RYK-203ENST00000473208 ADGRF5Q8IZF2 1346 aa8.61□□□□□ -1.03
RYK-203ENST00000473208 CROCC2H7BZ55 1655 aa8.6□□□□□ -1.03
RYK-203ENST00000473208 DIAPH1O60610 1272 aaKnown RBP8.6□□□□□ -1.03
RYK-203ENST00000473208 SLC26A8Q96RN1 970 aa8.6□□□□□ -1.03
RYK-203ENST00000473208 IPO8O15397 1037 aaKnown RBP8.6□□□□□ -1.03
RYK-203ENST00000473208 CEBPAP49715 358 aaPredicted RBP8.6□□□□□ -1.03
RYK-203ENST00000473208 UHRF1BP1Q6BDS2 1440 aa8.59□□□□□ -1.03
RYK-203ENST00000473208 TSPOAP1O95153 1857 aa8.59□□□□□ -1.03
RYK-203ENST00000473208 PUS7Q96PZ0 661 aaKnown RBP8.59□□□□□ -1.03
RYK-203ENST00000473208 YEATS2Q9ULM3 1422 aa8.59□□□□□ -1.04
RYK-203ENST00000473208 KDM6BO15054 1643 aa8.58□□□□□ -1.04
RYK-203ENST00000473208 ESCO1Q5FWF5 840 aa8.58□□□□□ -1.04
RYK-203ENST00000473208 RTN4Q9NQC3 1192 aaKnown RBP8.58□□□□□ -1.04
RYK-203ENST00000473208 LRPPRCP42704 1394 aaKnown RBP8.58□□□□□ -1.04
RYK-203ENST00000473208 GOLGA2Q08379 1002 aa8.58□□□□□ -1.04
RYK-203ENST00000473208 SMG6Q86US8 1419 aaKnown RBP8.58□□□□□ -1.04
RYK-203ENST00000473208 BECN1Q14457 450 aa8.58□□□□□ -1.04
RYK-203ENST00000473208 CCDC61Q9Y6R9 512 aa8.58□□□□□ -1.04
RYK-203ENST00000473208 NSD2O96028 1365 aa8.58□□□□□ -1.04
RYK-203ENST00000473208 CDC42BPBQ9Y5S2 1711 aa8.58□□□□□ -1.04
RYK-203ENST00000473208 AMOTL2Q9Y2J4 779 aa8.57□□□□□ -1.04
RYK-203ENST00000473208 TRPM2O94759 1503 aa8.57□□□□□ -1.04
RYK-203ENST00000473208 TET3O43151 1660 aa8.57□□□□□ -1.04
RYK-203ENST00000473208 EVA1CP58658 441 aa8.57□□□□□ -1.04
RYK-203ENST00000473208 IQGAP3Q86VI3 1631 aa8.56□□□□□ -1.04
RYK-203ENST00000473208 C1orf141Q5JVX7 400 aa8.56□□□□□ -1.04
RYK-203ENST00000473208 NUDT16Q96DE0 195 aaKnown RBP8.56□□□□□ -1.04
RYK-203ENST00000473208 HDAC5Q9UQL6 1122 aa8.56□□□□□ -1.04
RYK-203ENST00000473208 WASLO00401 505 aaPredicted RBP8.56□□□□□ -1.04
RYK-203ENST00000473208 NLRP6P59044 892 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms