RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 MINK1Q8N4C8 1332 aaPredicted RBP9.24□□□□□ -0.93
COMMD3-211ENST00000472673 IRF6O14896 467 aa9.23□□□□□ -0.93
COMMD3-211ENST00000472673 ZMYND10O75800 440 aa9.23□□□□□ -0.93
COMMD3-211ENST00000472673 SLC4A3P48751 1232 aa9.23□□□□□ -0.93
COMMD3-211ENST00000472673 SLF2Q8IX21 1173 aa9.23□□□□□ -0.93
COMMD3-211ENST00000472673 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
COMMD3-211ENST00000472673 BARGINQ6ZT62 677 aa9.22□□□□□ -0.93
COMMD3-211ENST00000472673 NLRP7Q8WX94 980 aa9.22□□□□□ -0.93
COMMD3-211ENST00000472673 CCDC102AQ96A19 550 aa9.22□□□□□ -0.93
COMMD3-211ENST00000472673 PHOX2BQ99453 314 aa9.21□□□□□ -0.94
COMMD3-211ENST00000472673 NYAP1Q6ZVC0 841 aa9.19□□□□□ -0.94
COMMD3-211ENST00000472673 NECTIN2Q92692 538 aa9.18□□□□□ -0.94
COMMD3-211ENST00000472673 DAXXQ9UER7 740 aaPredicted RBP9.16□□□□□ -0.94
COMMD3-211ENST00000472673 APLP1P51693 650 aa9.14□□□□□ -0.95
COMMD3-211ENST00000472673 MDM2Q00987 491 aaPredicted RBP9.14□□□□□ -0.95
COMMD3-211ENST00000472673 DDX11L8A8MPP1 907 aa9.13□□□□□ -0.95
COMMD3-211ENST00000472673 SLC10A3P09131 477 aa9.13□□□□□ -0.95
COMMD3-211ENST00000472673 RSPH4AQ5TD94 716 aa9.13□□□□□ -0.95
COMMD3-211ENST00000472673 CFHP08603 1231 aa9.12□□□□□ -0.95
COMMD3-211ENST00000472673 RDH13Q8NBN7 331 aa9.12□□□□□ -0.95
COMMD3-211ENST00000472673 KMT5BQ4FZB7 885 aa9.11□□□□□ -0.95
COMMD3-211ENST00000472673 PRR14Q9BWN1 585 aa9.11□□□□□ -0.95
COMMD3-211ENST00000472673 SLC24A3Q9HC58 644 aa9.11□□□□□ -0.95
COMMD3-211ENST00000472673 SULF1Q8IWU6 871 aa9.1□□□□□ -0.95
COMMD3-211ENST00000472673 AK7Q96M32 723 aa9.1□□□□□ -0.95
COMMD3-211ENST00000472673 CLCN1P35523 988 aa9.09□□□□□ -0.95
COMMD3-211ENST00000472673 GPCPD1Q9NPB8 672 aa9.09□□□□□ -0.95
COMMD3-211ENST00000472673 TRIM66O15016 1216 aa9.08□□□□□ -0.96
COMMD3-211ENST00000472673 TTLL12Q14166 644 aaPredicted RBP9.08□□□□□ -0.96
COMMD3-211ENST00000472673 ACTN4O43707 911 aaKnown RBP9.07□□□□□ -0.96
COMMD3-211ENST00000472673 ITGBL1O95965 494 aaPredicted RBP9.07□□□□□ -0.96
COMMD3-211ENST00000472673 MTRQ99707 1265 aa9.07□□□□□ -0.96
COMMD3-211ENST00000472673 PCDHB3Q9Y5E6 796 aa9.07□□□□□ -0.96
COMMD3-211ENST00000472673 COPS2P61201 443 aa9.06□□□□□ -0.96
COMMD3-211ENST00000472673 KCNC4Q03721 635 aa9.06□□□□□ -0.96
COMMD3-211ENST00000472673 AMHR2Q16671 573 aa9.06□□□□□ -0.96
COMMD3-211ENST00000472673 TJAP1Q5JTD0 557 aa9.06□□□□□ -0.96
COMMD3-211ENST00000472673 REPIN1Q9BWE0 567 aaKnown RBP9.06□□□□□ -0.96
COMMD3-211ENST00000472673 IFFO2Q5TF58 517 aa9.05□□□□□ -0.96
COMMD3-211ENST00000472673 TMUB1Q9BVT8 246 aa9.05□□□□□ -0.96
COMMD3-211ENST00000472673 IL21Q9HBE4 155 aa9.05□□□□□ -0.96
COMMD3-211ENST00000472673 CD46P15529 392 aa9.04□□□□□ -0.96
COMMD3-211ENST00000472673 FAM217BQ9NTX9 383 aaPredicted RBP9.04□□□□□ -0.96
COMMD3-211ENST00000472673 GCGRP47871 477 aa9.03□□□□□ -0.96
COMMD3-211ENST00000472673 BLOC1S3Q6QNY0 202 aa9.03□□□□□ -0.96
COMMD3-211ENST00000472673 ZNF516Q92618 1163 aa9.03□□□□□ -0.96
COMMD3-211ENST00000472673 SSTR3P32745 418 aaPredicted RBP9.01□□□□□ -0.97
COMMD3-211ENST00000472673 PDE4DQ08499 809 aa9.01□□□□□ -0.97
COMMD3-211ENST00000472673 PUS10Q3MIT2 529 aaKnown RBP9.01□□□□□ -0.97
COMMD3-211ENST00000472673 GIGYF2Q6Y7W6 1299 aaKnown RBP9.01□□□□□ -0.97
COMMD3-211ENST00000472673 PARP9Q8IXQ6 854 aa9.01□□□□□ -0.97
COMMD3-211ENST00000472673 RGS20O76081 388 aa9□□□□□ -0.97
COMMD3-211ENST00000472673 FUT2Q10981 343 aa9□□□□□ -0.97
COMMD3-211ENST00000472673 ZPR1O75312 459 aa8.99□□□□□ -0.97
COMMD3-211ENST00000472673 TPRNQ4KMQ1 711 aa8.99□□□□□ -0.97
COMMD3-211ENST00000472673 A0A0G2JS52 829 aa8.98□□□□□ -0.97
COMMD3-211ENST00000472673 NR1I2O75469 434 aa8.98□□□□□ -0.97
COMMD3-211ENST00000472673 ATP6V1AP38606 617 aa8.98□□□□□ -0.97
COMMD3-211ENST00000472673 KDM4AO75164 1064 aa8.97□□□□□ -0.97
COMMD3-211ENST00000472673 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
COMMD3-211ENST00000472673 TLL1O43897 1013 aa8.96□□□□□ -0.98
COMMD3-211ENST00000472673 GRIPAP1Q4V328 841 aa8.96□□□□□ -0.98
COMMD3-211ENST00000472673 MORN1Q5T089 497 aa8.96□□□□□ -0.98
COMMD3-211ENST00000472673 NUTM1Q86Y26 1132 aa8.96□□□□□ -0.98
COMMD3-211ENST00000472673 SCUBE3Q8IX30 993 aa8.96□□□□□ -0.98
COMMD3-211ENST00000472673 MS4A1P11836 297 aa8.94□□□□□ -0.98
COMMD3-211ENST00000472673 USP46P62068 366 aa8.94□□□□□ -0.98
COMMD3-211ENST00000472673 BEGAINQ9BUH8 593 aa8.94□□□□□ -0.98
COMMD3-211ENST00000472673 IRX2Q9BZI1 471 aaPredicted RBP8.94□□□□□ -0.98
COMMD3-211ENST00000472673 SLC27A5Q9Y2P5 690 aa8.94□□□□□ -0.98
COMMD3-211ENST00000472673 HOXA2O43364 376 aa8.92□□□□□ -0.98
COMMD3-211ENST00000472673 SPIRE2Q8WWL2 714 aa8.91□□□□□ -0.98
COMMD3-211ENST00000472673 HLA-CQ95604 372 aa8.91□□□□□ -0.98
COMMD3-211ENST00000472673 ADH1BP00325 375 aa8.9□□□□□ -0.98
COMMD3-211ENST00000472673 PPP1R18Q6NYC8 613 aa8.9□□□□□ -0.98
COMMD3-211ENST00000472673 SPSB2Q99619 263 aa8.9□□□□□ -0.98
COMMD3-211ENST00000472673 GPBP1L1Q9HC44 474 aaPredicted RBP8.9□□□□□ -0.98
COMMD3-211ENST00000472673 GUCA2AQ02747 115 aa8.89□□□□□ -0.99
COMMD3-211ENST00000472673 FMNL1O95466 1100 aaPredicted RBP8.88□□□□□ -0.99
COMMD3-211ENST00000472673 GGCXP38435 758 aa8.88□□□□□ -0.99
COMMD3-211ENST00000472673 RNF19BQ6ZMZ0 732 aa8.88□□□□□ -0.99
COMMD3-211ENST00000472673 THAP11Q96EK4 314 aa8.88□□□□□ -0.99
COMMD3-211ENST00000472673 KDM4CQ9H3R0 1056 aa8.88□□□□□ -0.99
COMMD3-211ENST00000472673 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.88□□□□□ -0.99
COMMD3-211ENST00000472673 S1PR4O95977 384 aa8.87□□□□□ -0.99
COMMD3-211ENST00000472673 Q3C1V9 767 aa8.87□□□□□ -0.99
COMMD3-211ENST00000472673 TBC1D2Q9BYX2 928 aa8.87□□□□□ -0.99
COMMD3-211ENST00000472673 SLC6A16Q9GZN6 736 aa8.87□□□□□ -0.99
COMMD3-211ENST00000472673 FDX1P10109 184 aa8.86□□□□□ -0.99
COMMD3-211ENST00000472673 PRKCSHP14314 528 aaPredicted RBP8.86□□□□□ -0.99
COMMD3-211ENST00000472673 NDUFV2P19404 249 aa8.86□□□□□ -0.99
COMMD3-211ENST00000472673 DIXDC1Q155Q3 683 aa8.86□□□□□ -0.99
COMMD3-211ENST00000472673 BRICD5Q6PL45 260 aa8.86□□□□□ -0.99
COMMD3-211ENST00000472673 SALL2Q9Y467 1007 aaPredicted RBP8.86□□□□□ -0.99
COMMD3-211ENST00000472673 MOXD2PA6NHM9 499 aa8.85□□□□□ -0.99
COMMD3-211ENST00000472673 NEUROD2Q15784 382 aa8.84□□□□□ -0.99
COMMD3-211ENST00000472673 RNF223E7ERA6 249 aa8.83□□□□□ -1
COMMD3-211ENST00000472673 PPEF1O14829 653 aaPredicted RBP8.83□□□□□ -1
COMMD3-211ENST00000472673 FAM160A2Q8N612 972 aaPredicted RBP8.83□□□□□ -1
COMMD3-211ENST00000472673 SYMPKQ92797 1274 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms