RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 RPGRIP1LQ68CZ1 1315 aa25.25■■□□□ 1.63
GCFC2-208ENST00000472230 ADGRF5Q8IZF2 1346 aa25.25■■□□□ 1.63
GCFC2-208ENST00000472230 SCAF11Q99590 1463 aaKnown RBP25.24■■□□□ 1.63
GCFC2-208ENST00000472230 CLTCQ00610 1675 aaKnown RBP25.23■■□□□ 1.63
GCFC2-208ENST00000472230 PRKRIP1Q9H875 184 aaPredicted RBP25.23■■□□□ 1.63
GCFC2-208ENST00000472230 SLC52A1Q9NWF4 448 aa25.23■■□□□ 1.63
GCFC2-208ENST00000472230 NRXN1Q9ULB1 1477 aa25.22■■□□□ 1.63
GCFC2-208ENST00000472230 TMF1P82094 1093 aa25.21■■□□□ 1.63
GCFC2-208ENST00000472230 EIF3AQ14152 1382 aaKnown RBP25.21■■□□□ 1.63
GCFC2-208ENST00000472230 CFAP70Q5T0N1 1121 aa25.2■■□□□ 1.63
GCFC2-208ENST00000472230 TESK2Q96S53 571 aa25.2■■□□□ 1.63
GCFC2-208ENST00000472230 MLECQ14165 292 aa25.2■■□□□ 1.62
GCFC2-208ENST00000472230 IDI1Q13907 227 aa25.17■■□□□ 1.62
GCFC2-208ENST00000472230 ERVK-7P63135 1459 aa25.16■■□□□ 1.62
GCFC2-208ENST00000472230 DISP3Q9P2K9 1392 aa25.16■■□□□ 1.62
GCFC2-208ENST00000472230 ESF1Q9H501 851 aaKnown RBP25.15■■□□□ 1.62
GCFC2-208ENST00000472230 SCAF1Q9H7N4 1312 aaKnown RBP25.15■■□□□ 1.62
GCFC2-208ENST00000472230 PIK3C2GO75747 1445 aa25.14■■□□□ 1.61
GCFC2-208ENST00000472230 SETBP1Q9Y6X0 1596 aa25.13■■□□□ 1.61
GCFC2-208ENST00000472230 NEXMIFQ5QGS0 1516 aa25.13■■□□□ 1.61
GCFC2-208ENST00000472230 VGFO15240 615 aaPredicted RBP25.13■■□□□ 1.61
GCFC2-208ENST00000472230 FBXO31Q5XUX0 539 aaPredicted RBP25.13■■□□□ 1.61
GCFC2-208ENST00000472230 MYO5BQ9ULV0 1848 aa25.12■■□□□ 1.61
GCFC2-208ENST00000472230 TRHP20396 242 aaPredicted RBP25.11■■□□□ 1.61
GCFC2-208ENST00000472230 TMEM131LA2VDJ0 1609 aa25.11■■□□□ 1.61
GCFC2-208ENST00000472230 CDCA8Q53HL2 280 aa25.1■■□□□ 1.61
GCFC2-208ENST00000472230 C14orf93Q9H972 538 aaKnown RBP25.09■■□□□ 1.61
GCFC2-208ENST00000472230 CNGB1Q14028 1251 aaPredicted RBP25.09■■□□□ 1.61
GCFC2-208ENST00000472230 SLC24A1O60721 1099 aa25.08■■□□□ 1.61
GCFC2-208ENST00000472230 SPATA31D1Q6ZQQ2 1576 aa25.08■■□□□ 1.6
GCFC2-208ENST00000472230 STAG3Q9UJ98 1225 aa25.07■■□□□ 1.6
GCFC2-208ENST00000472230 GTF3C3Q9Y5Q9 886 aa25.07■■□□□ 1.6
GCFC2-208ENST00000472230 MRS2Q9HD23 443 aa25.06■■□□□ 1.6
GCFC2-208ENST00000472230 NUTM2DQ5VT03 806 aaPredicted RBP25.05■■□□□ 1.6
GCFC2-208ENST00000472230 MYO3AQ8NEV4 1616 aa25.04■■□□□ 1.6
GCFC2-208ENST00000472230 ZFYVE9O95405 1425 aa25.04■■□□□ 1.6
GCFC2-208ENST00000472230 CCDC184Q52MB2 194 aa25.02■■□□□ 1.6
GCFC2-208ENST00000472230 KTN1Q86UP2 1357 aaKnown RBP25.02■■□□□ 1.6
GCFC2-208ENST00000472230 KDM5AP29375 1690 aaKnown RBP25.01■■□□□ 1.59
GCFC2-208ENST00000472230 ADGRB1O14514 1584 aa25.01■■□□□ 1.59
GCFC2-208ENST00000472230 ZMYM3Q14202 1370 aa25.01■■□□□ 1.59
GCFC2-208ENST00000472230 TRAK1Q9UPV9 953 aa24.98■■□□□ 1.59
GCFC2-208ENST00000472230 CENPJQ9HC77 1338 aaPredicted RBP24.98■■□□□ 1.59
GCFC2-208ENST00000472230 RALBP1Q15311 655 aa24.98■■□□□ 1.59
GCFC2-208ENST00000472230 PANK3Q9H999 370 aa24.98■■□□□ 1.59
GCFC2-208ENST00000472230 TMEM132EQ6IEE7 984 aa24.97■■□□□ 1.59
GCFC2-208ENST00000472230 QRICH2Q9H0J4 1663 aa24.95■■□□□ 1.58
GCFC2-208ENST00000472230 FAM9BQ8IZU0 186 aa24.95■■□□□ 1.58
GCFC2-208ENST00000472230 SBNO2Q9Y2G9 1366 aa24.94■■□□□ 1.58
GCFC2-208ENST00000472230 PER1O15534 1290 aaPredicted RBP24.94■■□□□ 1.58
GCFC2-208ENST00000472230 HNRNPUQ00839 825 aaKnown RBP eCLIP24.93■■□□□ 1.58
GCFC2-208ENST00000472230 A2ML1A8K2U0 1454 aa24.93■■□□□ 1.58
GCFC2-208ENST00000472230 MYBBP1AQ9BQG0 1328 aaKnown RBP24.92■■□□□ 1.58
GCFC2-208ENST00000472230 MYOM1P52179 1685 aa24.91■■□□□ 1.58
GCFC2-208ENST00000472230 ARHGEF28Q8N1W1 1705 aaKnown RBP24.9■■□□□ 1.58
GCFC2-208ENST00000472230 TNRQ92752 1358 aa24.89■■□□□ 1.58
GCFC2-208ENST00000472230 TMC1Q8TDI8 760 aa24.89■■□□□ 1.57
GCFC2-208ENST00000472230 RIMS2Q9UQ26 1411 aa24.88■■□□□ 1.57
GCFC2-208ENST00000472230 SENP3Q9H4L4 574 aaPredicted RBP24.88■■□□□ 1.57
GCFC2-208ENST00000472230 PARD3Q8TEW0 1356 aa24.88■■□□□ 1.57
GCFC2-208ENST00000472230 KNSTRNQ9Y448 316 aa24.87■■□□□ 1.57
GCFC2-208ENST00000472230 BRD4O60885 1362 aaPredicted RBP24.86■■□□□ 1.57
GCFC2-208ENST00000472230 CC2D1BQ5T0F9 858 aaKnown RBP24.86■■□□□ 1.57
GCFC2-208ENST00000472230 ALKQ9UM73 1620 aa24.84■■□□□ 1.57
GCFC2-208ENST00000472230 ASXL1Q8IXJ9 1541 aa24.84■■□□□ 1.57
GCFC2-208ENST00000472230 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.83■■□□□ 1.57
GCFC2-208ENST00000472230 FER1L4A9Z1Z3 1794 aa24.82■■□□□ 1.56
GCFC2-208ENST00000472230 STK26Q9P289 416 aa24.82■■□□□ 1.56
GCFC2-208ENST00000472230 DNAJC5Q9H3Z4 198 aa24.82■■□□□ 1.56
GCFC2-208ENST00000472230 NLRP13Q86W25 1043 aa24.81■■□□□ 1.56
GCFC2-208ENST00000472230 HDGFP51858 240 aaKnown RBP24.81■■□□□ 1.56
GCFC2-208ENST00000472230 YTHDC2Q9H6S0 1430 aaKnown RBP24.79■■□□□ 1.56
GCFC2-208ENST00000472230 EVC2Q86UK5 1308 aa24.78■■□□□ 1.56
GCFC2-208ENST00000472230 UBR1Q8IWV7 1749 aa24.78■■□□□ 1.56
GCFC2-208ENST00000472230 C3P01024 1663 aa24.77■■□□□ 1.56
GCFC2-208ENST00000472230 PNISRQ8TF01 805 aaKnown RBP24.76■■□□□ 1.55
GCFC2-208ENST00000472230 NLRP1Q9C000 1473 aa24.75■■□□□ 1.55
GCFC2-208ENST00000472230 POGKQ9P215 609 aa24.74■■□□□ 1.55
GCFC2-208ENST00000472230 PTPRMP28827 1452 aa24.74■■□□□ 1.55
GCFC2-208ENST00000472230 CEBPAP49715 358 aaPredicted RBP24.73■■□□□ 1.55
GCFC2-208ENST00000472230 SAFB2Q14151 953 aaKnown RBP eCLIP24.73■■□□□ 1.55
GCFC2-208ENST00000472230 PUS7Q96PZ0 661 aaKnown RBP24.73■■□□□ 1.55
GCFC2-208ENST00000472230 AMER1Q5JTC6 1135 aaPredicted RBP24.73■■□□□ 1.55
GCFC2-208ENST00000472230 TULP4Q9NRJ4 1543 aa24.73■■□□□ 1.55
GCFC2-208ENST00000472230 SETD1AO15047 1707 aaKnown RBP24.72■■□□□ 1.55
GCFC2-208ENST00000472230 NPC1L1Q9UHC9 1359 aa24.72■■□□□ 1.55
GCFC2-208ENST00000472230 ZBED9Q6R2W3 1325 aa24.71■■□□□ 1.55
GCFC2-208ENST00000472230 PRAM1Q96QH2 718 aa24.7■■□□□ 1.55
GCFC2-208ENST00000472230 TMEM2Q9UHN6 1383 aa24.7■■□□□ 1.54
GCFC2-208ENST00000472230 PLPPR3Q6T4P5 718 aa24.7■■□□□ 1.54
GCFC2-208ENST00000472230 NRXN3Q9Y4C0 1643 aa24.69■■□□□ 1.54
GCFC2-208ENST00000472230 BCANQ96GW7 911 aa24.69■■□□□ 1.54
GCFC2-208ENST00000472230 LRPPRCP42704 1394 aaKnown RBP24.67■■□□□ 1.54
GCFC2-208ENST00000472230 DLC1Q96QB1 1528 aa24.67■■□□□ 1.54
GCFC2-208ENST00000472230 SLC12A5Q9H2X9 1139 aa24.66■■□□□ 1.54
GCFC2-208ENST00000472230 MINK1Q8N4C8 1332 aaPredicted RBP24.66■■□□□ 1.54
GCFC2-208ENST00000472230 CARD14Q9BXL6 1004 aa24.65■■□□□ 1.54
GCFC2-208ENST00000472230 SRPK2P78362 688 aaKnown RBP24.64■■□□□ 1.54
GCFC2-208ENST00000472230 CABP2Q9NPB3 220 aa24.64■■□□□ 1.54
GCFC2-208ENST00000472230 PPP2R1AP30153 589 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms