RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 KNSTRNQ9Y448 316 aa27.76■■■□□ 2.04
SNX21-209ENST00000472219 EFCAB6Q5THR3 1501 aa27.76■■■□□ 2.03
SNX21-209ENST00000472219 KIF1BO60333 1816 aa27.75■■■□□ 2.03
SNX21-209ENST00000472219 LMTK2Q8IWU2 1503 aa27.74■■■□□ 2.03
SNX21-209ENST00000472219 KIDINS220Q9ULH0 1771 aa27.73■■■□□ 2.03
SNX21-209ENST00000472219 NPM1P06748 294 aaKnown RBP eCLIP27.72■■■□□ 2.03
SNX21-209ENST00000472219 MAP3K4Q9Y6R4 1608 aa27.72■■■□□ 2.03
SNX21-209ENST00000472219 RCAN3Q9UKA8 241 aa27.71■■■□□ 2.03
SNX21-209ENST00000472219 RRP1P56182 461 aaKnown RBP27.7■■■□□ 2.03
SNX21-209ENST00000472219 KDM5AP29375 1690 aaKnown RBP27.69■■■□□ 2.02
SNX21-209ENST00000472219 NPC1L1Q9UHC9 1359 aa27.69■■■□□ 2.02
SNX21-209ENST00000472219 ASXL1Q8IXJ9 1541 aa27.68■■■□□ 2.02
SNX21-209ENST00000472219 IFT172Q9UG01 1749 aa27.66■■■□□ 2.02
SNX21-209ENST00000472219 PPRC1Q5VV67 1664 aaKnown RBP27.66■■■□□ 2.02
SNX21-209ENST00000472219 SENP3-EIF4A1A0A087X0R7 540 aa27.66■■■□□ 2.02
SNX21-209ENST00000472219 ABCA6Q8N139 1617 aa27.64■■■□□ 2.02
SNX21-209ENST00000472219 MYOM1P52179 1685 aa27.63■■■□□ 2.01
SNX21-209ENST00000472219 AMER1Q5JTC6 1135 aaPredicted RBP27.63■■■□□ 2.01
SNX21-209ENST00000472219 PIK3C2GO75747 1445 aa27.61■■■□□ 2.01
SNX21-209ENST00000472219 POGZQ7Z3K3 1410 aa27.61■■■□□ 2.01
SNX21-209ENST00000472219 MLH3Q9UHC1 1453 aa27.61■■■□□ 2.01
SNX21-209ENST00000472219 NRXN1Q9ULB1 1477 aa27.61■■■□□ 2.01
SNX21-209ENST00000472219 PPP2R1AP30153 589 aa27.61■■■□□ 2.01
SNX21-209ENST00000472219 SALL2Q9Y467 1007 aaPredicted RBP27.6■■■□□ 2.01
SNX21-209ENST00000472219 WDR43Q15061 677 aaKnown RBP eCLIP27.59■■■□□ 2.01
SNX21-209ENST00000472219 CD109Q6YHK3 1445 aa27.59■■■□□ 2.01
SNX21-209ENST00000472219 UGGT1Q9NYU2 1555 aa27.59■■■□□ 2.01
SNX21-209ENST00000472219 OSCARQ8IYS5 282 aa27.58■■■□□ 2.01
SNX21-209ENST00000472219 ADGRB3O60242 1522 aa27.58■■■□□ 2.01
SNX21-209ENST00000472219 MYO3AQ8NEV4 1616 aa27.58■■■□□ 2.01
SNX21-209ENST00000472219 HECW2Q9P2P5 1572 aa27.57■■■□□ 2
SNX21-209ENST00000472219 SETBP1Q9Y6X0 1596 aa27.57■■■□□ 2
SNX21-209ENST00000472219 SBNO2Q9Y2G9 1366 aa27.57■■■□□ 2
SNX21-209ENST00000472219 MROH2AA6NES4 1674 aa27.56■■■□□ 2
SNX21-209ENST00000472219 ERICH6Q7L0X2 663 aa27.55■■■□□ 2
SNX21-209ENST00000472219 CFAP70Q5T0N1 1121 aa27.55■■■□□ 2
SNX21-209ENST00000472219 ADGRF5Q8IZF2 1346 aa27.53■■■□□ 2
SNX21-209ENST00000472219 MSH5O43196 834 aa27.53■■■□□ 2
SNX21-209ENST00000472219 ADAMTS8Q9UP79 889 aa27.53■■■□□ 2
SNX21-209ENST00000472219 ERVK-7P63135 1459 aa27.53■■■□□ 2
SNX21-209ENST00000472219 CDCA7LQ96GN5 454 aa27.51■■□□□ 1.99
SNX21-209ENST00000472219 FRMPD1Q5SYB0 1578 aa27.49■■□□□ 1.99
SNX21-209ENST00000472219 NEO1Q92859 1461 aa27.49■■□□□ 1.99
SNX21-209ENST00000472219 RPGRIP1LQ68CZ1 1315 aa27.48■■□□□ 1.99
SNX21-209ENST00000472219 EXOC6Q8TAG9 804 aa27.48■■□□□ 1.99
SNX21-209ENST00000472219 NPATQ14207 1427 aa27.48■■□□□ 1.99
SNX21-209ENST00000472219 NOS1P29475 1434 aa27.47■■□□□ 1.99
SNX21-209ENST00000472219 PPLO60437 1756 aa27.47■■□□□ 1.99
SNX21-209ENST00000472219 CENPJQ9HC77 1338 aaPredicted RBP27.44■■□□□ 1.98
SNX21-209ENST00000472219 ABCC3O15438 1527 aa27.43■■□□□ 1.98
SNX21-209ENST00000472219 NGEFQ8N5V2 710 aa27.41■■□□□ 1.98
SNX21-209ENST00000472219 CHGAP10645 457 aaKnown RBP27.4■■□□□ 1.98
SNX21-209ENST00000472219 TCERG1O14776 1098 aaKnown RBP27.4■■□□□ 1.98
SNX21-209ENST00000472219 GGT6Q6P531 493 aa27.4■■□□□ 1.98
SNX21-209ENST00000472219 CAMSAP1Q5T5Y3 1602 aa27.39■■□□□ 1.98
SNX21-209ENST00000472219 GOLGA2Q08379 1002 aa27.39■■□□□ 1.98
SNX21-209ENST00000472219 C14orf93Q9H972 538 aaKnown RBP27.39■■□□□ 1.98
SNX21-209ENST00000472219 ZNF521Q96K83 1311 aa27.38■■□□□ 1.97
SNX21-209ENST00000472219 PLEKHH1Q9ULM0 1364 aa27.37■■□□□ 1.97
SNX21-209ENST00000472219 ZC3H13Q5T200 1668 aaKnown RBP27.37■■□□□ 1.97
SNX21-209ENST00000472219 ANP32AP39687 249 aaKnown RBP27.36■■□□□ 1.97
SNX21-209ENST00000472219 QRICH2Q9H0J4 1663 aa27.35■■□□□ 1.97
SNX21-209ENST00000472219 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.35■■□□□ 1.97
SNX21-209ENST00000472219 ADGRB1O14514 1584 aa27.35■■□□□ 1.97
SNX21-209ENST00000472219 DUSP27Q5VZP5 1158 aa27.34■■□□□ 1.97
SNX21-209ENST00000472219 PIK3C2BO00750 1634 aa27.32■■□□□ 1.96
SNX21-209ENST00000472219 MS4A1P11836 297 aa27.32■■□□□ 1.96
SNX21-209ENST00000472219 CARD14Q9BXL6 1004 aa27.31■■□□□ 1.96
SNX21-209ENST00000472219 CFAP65Q6ZU64 1925 aaKnown RBP27.31■■□□□ 1.96
SNX21-209ENST00000472219 ARHGAP31Q2M1Z3 1444 aa27.31■■□□□ 1.96
SNX21-209ENST00000472219 DIP2CQ9Y2E4 1556 aa27.3■■□□□ 1.96
SNX21-209ENST00000472219 POLR3AO14802 1390 aaPredicted RBP27.3■■□□□ 1.96
SNX21-209ENST00000472219 PUS7Q96PZ0 661 aaKnown RBP27.3■■□□□ 1.96
SNX21-209ENST00000472219 USP32Q8NFA0 1604 aa27.29■■□□□ 1.96
SNX21-209ENST00000472219 VGFO15240 615 aaPredicted RBP27.28■■□□□ 1.96
SNX21-209ENST00000472219 SLFN5Q08AF3 891 aa27.28■■□□□ 1.96
SNX21-209ENST00000472219 CRBNQ96SW2 442 aa27.28■■□□□ 1.96
SNX21-209ENST00000472219 TRAK1Q9UPV9 953 aa27.28■■□□□ 1.96
SNX21-209ENST00000472219 PLIN1O60240 522 aa27.27■■□□□ 1.96
SNX21-209ENST00000472219 NOP58Q9Y2X3 529 aaKnown RBP27.27■■□□□ 1.96
SNX21-209ENST00000472219 NSD3Q9BZ95 1437 aa27.25■■□□□ 1.95
SNX21-209ENST00000472219 GLI2P10070 1586 aa27.24■■□□□ 1.95
SNX21-209ENST00000472219 RICTORQ6R327 1708 aa27.24■■□□□ 1.95
SNX21-209ENST00000472219 SIGLEC1Q9BZZ2 1709 aa27.24■■□□□ 1.95
SNX21-209ENST00000472219 TRMT2AQ8IZ69 625 aaKnown RBP27.24■■□□□ 1.95
SNX21-209ENST00000472219 NKTRP30414 1462 aaKnown RBP27.23■■□□□ 1.95
SNX21-209ENST00000472219 NEXMIFQ5QGS0 1516 aa27.23■■□□□ 1.95
SNX21-209ENST00000472219 E9PSI1 815 aa27.23■■□□□ 1.95
SNX21-209ENST00000472219 IPO9Q96P70 1041 aaKnown RBP27.23■■□□□ 1.95
SNX21-209ENST00000472219 APAF1O14727 1248 aa27.21■■□□□ 1.95
SNX21-209ENST00000472219 RAPGEF3O95398 923 aa27.21■■□□□ 1.95
SNX21-209ENST00000472219 MORC1Q86VD1 984 aa27.21■■□□□ 1.95
SNX21-209ENST00000472219 CCDC146Q8IYE0 955 aa27.21■■□□□ 1.95
SNX21-209ENST00000472219 ZFYVE9O95405 1425 aa27.21■■□□□ 1.95
SNX21-209ENST00000472219 EVC2Q86UK5 1308 aa27.21■■□□□ 1.95
SNX21-209ENST00000472219 SLC52A1Q9NWF4 448 aa27.2■■□□□ 1.94
SNX21-209ENST00000472219 CGNL1Q0VF96 1302 aa27.19■■□□□ 1.94
SNX21-209ENST00000472219 ARHGEF28Q8N1W1 1705 aaKnown RBP27.19■■□□□ 1.94
SNX21-209ENST00000472219 NSD2O96028 1365 aa27.18■■□□□ 1.94
SNX21-209ENST00000472219 TMEM132EQ6IEE7 984 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms