RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 ABCA6Q8N139 1617 aa20.25■□□□□ 0.83
UBXN11-213ENST00000472155 RBM19Q9Y4C8 960 aaKnown RBP20.25■□□□□ 0.83
UBXN11-213ENST00000472155 NUTM2DQ5VT03 806 aaPredicted RBP20.24■□□□□ 0.83
UBXN11-213ENST00000472155 CYB5RLQ6IPT4 315 aa20.24■□□□□ 0.83
UBXN11-213ENST00000472155 KIF1BO60333 1816 aa20.23■□□□□ 0.83
UBXN11-213ENST00000472155 MAP3K4Q9Y6R4 1608 aa20.23■□□□□ 0.83
UBXN11-213ENST00000472155 NOS1P29475 1434 aa20.23■□□□□ 0.83
UBXN11-213ENST00000472155 MLH3Q9UHC1 1453 aa20.22■□□□□ 0.83
UBXN11-213ENST00000472155 CDCA7LQ96GN5 454 aa20.22■□□□□ 0.83
UBXN11-213ENST00000472155 HECW2Q9P2P5 1572 aa20.22■□□□□ 0.83
UBXN11-213ENST00000472155 AMER1Q5JTC6 1135 aaPredicted RBP20.21■□□□□ 0.83
UBXN11-213ENST00000472155 WASHC2CQ9Y4E1 1318 aa20.21■□□□□ 0.83
UBXN11-213ENST00000472155 KNSTRNQ9Y448 316 aa20.2■□□□□ 0.82
UBXN11-213ENST00000472155 LMTK2Q8IWU2 1503 aa20.19■□□□□ 0.82
UBXN11-213ENST00000472155 IFT172Q9UG01 1749 aa20.19■□□□□ 0.82
UBXN11-213ENST00000472155 TMEM132EQ6IEE7 984 aa20.19■□□□□ 0.82
UBXN11-213ENST00000472155 MYOM1P52179 1685 aa20.18■□□□□ 0.82
UBXN11-213ENST00000472155 RNF123Q5XPI4 1314 aa20.18■□□□□ 0.82
UBXN11-213ENST00000472155 MYOM2P54296 1465 aa20.17■□□□□ 0.82
UBXN11-213ENST00000472155 STAC3Q96MF2 364 aa20.17■□□□□ 0.82
UBXN11-213ENST00000472155 PPP2R1AP30153 589 aa20.17■□□□□ 0.82
UBXN11-213ENST00000472155 CFAP74Q9C0B2 1584 aa20.16■□□□□ 0.82
UBXN11-213ENST00000472155 ERICH6BQ5W0A0 696 aa20.16■□□□□ 0.82
UBXN11-213ENST00000472155 TRAK1Q9UPV9 953 aa20.16■□□□□ 0.82
UBXN11-213ENST00000472155 SIGLEC1Q9BZZ2 1709 aa20.16■□□□□ 0.82
UBXN11-213ENST00000472155 YEATS2Q9ULM3 1422 aa20.16■□□□□ 0.82
UBXN11-213ENST00000472155 ERVK-7P63135 1459 aa20.16■□□□□ 0.82
UBXN11-213ENST00000472155 ADAMTS8Q9UP79 889 aa20.16■□□□□ 0.82
UBXN11-213ENST00000472155 ABCC3O15438 1527 aa20.15■□□□□ 0.82
UBXN11-213ENST00000472155 ADGRB3O60242 1522 aa20.15■□□□□ 0.82
UBXN11-213ENST00000472155 KIAA1210Q9ULL0 1709 aa20.15■□□□□ 0.82
UBXN11-213ENST00000472155 NEURL4Q96JN8 1562 aa20.14■□□□□ 0.81
UBXN11-213ENST00000472155 CARD14Q9BXL6 1004 aa20.13■□□□□ 0.81
UBXN11-213ENST00000472155 EIF3AQ14152 1382 aaKnown RBP20.13■□□□□ 0.81
UBXN11-213ENST00000472155 NRXN1Q9ULB1 1477 aa20.13■□□□□ 0.81
UBXN11-213ENST00000472155 SYNMO15061 1565 aa20.13■□□□□ 0.81
UBXN11-213ENST00000472155 DIP2CQ9Y2E4 1556 aa20.12■□□□□ 0.81
UBXN11-213ENST00000472155 NEO1Q92859 1461 aa20.11■□□□□ 0.81
UBXN11-213ENST00000472155 CDCA8Q53HL2 280 aa20.1■□□□□ 0.81
UBXN11-213ENST00000472155 BLMP54132 1417 aaPredicted RBP20.1■□□□□ 0.81
UBXN11-213ENST00000472155 KDM5AP29375 1690 aaKnown RBP20.09■□□□□ 0.81
UBXN11-213ENST00000472155 RICTORQ6R327 1708 aa20.09■□□□□ 0.81
UBXN11-213ENST00000472155 ASXL1Q8IXJ9 1541 aa20.09■□□□□ 0.81
UBXN11-213ENST00000472155 PPLO60437 1756 aa20.08■□□□□ 0.81
UBXN11-213ENST00000472155 PIK3C2GO75747 1445 aa20.08■□□□□ 0.81
UBXN11-213ENST00000472155 CAMSAP1Q5T5Y3 1602 aa20.08■□□□□ 0.81
UBXN11-213ENST00000472155 C14orf93Q9H972 538 aaKnown RBP20.07■□□□□ 0.8
UBXN11-213ENST00000472155 RCAN3Q9UKA8 241 aa20.06■□□□□ 0.8
UBXN11-213ENST00000472155 CENPJQ9HC77 1338 aaPredicted RBP20.06■□□□□ 0.8
UBXN11-213ENST00000472155 IDI1Q13907 227 aa20.06■□□□□ 0.8
UBXN11-213ENST00000472155 RRP1P56182 461 aaKnown RBP20.05■□□□□ 0.8
UBXN11-213ENST00000472155 FAM69CQ0P6D2 419 aa20.05■□□□□ 0.8
UBXN11-213ENST00000472155 PLIN1O60240 522 aa20.05■□□□□ 0.8
UBXN11-213ENST00000472155 ADGRB1O14514 1584 aa20.04■□□□□ 0.8
UBXN11-213ENST00000472155 CCDC146Q8IYE0 955 aa20.04■□□□□ 0.8
UBXN11-213ENST00000472155 SLC12A5Q9H2X9 1139 aa20.04■□□□□ 0.8
UBXN11-213ENST00000472155 PLEKHH1Q9ULM0 1364 aa20.04■□□□□ 0.8
UBXN11-213ENST00000472155 EXOC6Q8TAG9 804 aa20.04■□□□□ 0.8
UBXN11-213ENST00000472155 SAFB2Q14151 953 aaKnown RBP eCLIP20.03■□□□□ 0.8
UBXN11-213ENST00000472155 FBXO31Q5XUX0 539 aaPredicted RBP20.03■□□□□ 0.8
UBXN11-213ENST00000472155 CCDC136Q96JN2 1154 aa20.03■□□□□ 0.8
UBXN11-213ENST00000472155 WDR43Q15061 677 aaKnown RBP eCLIP20.01■□□□□ 0.79
UBXN11-213ENST00000472155 TSPOAP1O95153 1857 aa20.01■□□□□ 0.79
UBXN11-213ENST00000472155 TNNT2P45379 298 aaPredicted RBP20■□□□□ 0.79
UBXN11-213ENST00000472155 MYO3AQ8NEV4 1616 aa19.99■□□□□ 0.79
UBXN11-213ENST00000472155 RIMBP3CA6NJZ7 1639 aa19.99■□□□□ 0.79
UBXN11-213ENST00000472155 RIMBP3BA6NNM3 1639 aa19.99■□□□□ 0.79
UBXN11-213ENST00000472155 RIMBP3Q9UFD9 1639 aa19.99■□□□□ 0.79
UBXN11-213ENST00000472155 PDE3BQ13370 1112 aa19.99■□□□□ 0.79
UBXN11-213ENST00000472155 PIK3C2BO00750 1634 aa19.98■□□□□ 0.79
UBXN11-213ENST00000472155 SETBP1Q9Y6X0 1596 aa19.98■□□□□ 0.79
UBXN11-213ENST00000472155 QRICH2Q9H0J4 1663 aa19.98■□□□□ 0.79
UBXN11-213ENST00000472155 NEXMIFQ5QGS0 1516 aa19.98■□□□□ 0.79
UBXN11-213ENST00000472155 MSH5O43196 834 aa19.98■□□□□ 0.79
UBXN11-213ENST00000472155 MYO5BQ9ULV0 1848 aa19.98■□□□□ 0.79
UBXN11-213ENST00000472155 ZMYM4Q5VZL5 1548 aa19.98■□□□□ 0.79
UBXN11-213ENST00000472155 STK26Q9P289 416 aa19.97■□□□□ 0.79
UBXN11-213ENST00000472155 NPC1L1Q9UHC9 1359 aa19.95■□□□□ 0.78
UBXN11-213ENST00000472155 SBNO2Q9Y2G9 1366 aa19.95■□□□□ 0.78
UBXN11-213ENST00000472155 ZC3H13Q5T200 1668 aaKnown RBP19.95■□□□□ 0.78
UBXN11-213ENST00000472155 RPGRIP1LQ68CZ1 1315 aa19.95■□□□□ 0.78
UBXN11-213ENST00000472155 NSD3Q9BZ95 1437 aa19.95■□□□□ 0.78
UBXN11-213ENST00000472155 GLI2P10070 1586 aa19.94■□□□□ 0.78
UBXN11-213ENST00000472155 SPINK5Q9NQ38 1064 aaPredicted RBP19.94■□□□□ 0.78
UBXN11-213ENST00000472155 INSRP06213 1382 aa19.93■□□□□ 0.78
UBXN11-213ENST00000472155 VGFO15240 615 aaPredicted RBP19.93■□□□□ 0.78
UBXN11-213ENST00000472155 C20orf194Q5TEA3 1177 aa19.93■□□□□ 0.78
UBXN11-213ENST00000472155 CABP2Q9NPB3 220 aa19.93■□□□□ 0.78
UBXN11-213ENST00000472155 APAF1O14727 1248 aa19.92■□□□□ 0.78
UBXN11-213ENST00000472155 DMRT2Q9Y5R5 561 aa19.92■□□□□ 0.78
UBXN11-213ENST00000472155 ZNF521Q96K83 1311 aa19.92■□□□□ 0.78
UBXN11-213ENST00000472155 ARHGAP31Q2M1Z3 1444 aa19.91■□□□□ 0.78
UBXN11-213ENST00000472155 MLECQ14165 292 aa19.91■□□□□ 0.78
UBXN11-213ENST00000472155 DUSP27Q5VZP5 1158 aa19.91■□□□□ 0.78
UBXN11-213ENST00000472155 DIP2BQ9P265 1576 aa19.91■□□□□ 0.78
UBXN11-213ENST00000472155 TULP4Q9NRJ4 1543 aa19.89■□□□□ 0.78
UBXN11-213ENST00000472155 PREX1Q8TCU6 1659 aa19.89■□□□□ 0.77
UBXN11-213ENST00000472155 ARHGEF28Q8N1W1 1705 aaKnown RBP19.89■□□□□ 0.77
UBXN11-213ENST00000472155 SKAP1Q86WV1 359 aa19.89■□□□□ 0.77
UBXN11-213ENST00000472155 MORC1Q86VD1 984 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms