RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 GGT6Q6P531 493 aa9.47□□□□□ -0.89
ITGB1-209ENST00000472147 SLAIN1Q8ND83 568 aa9.47□□□□□ -0.89
ITGB1-209ENST00000472147 STK24Q9Y6E0 443 aa9.47□□□□□ -0.89
ITGB1-209ENST00000472147 KDM5CP41229 1560 aa9.46□□□□□ -0.89
ITGB1-209ENST00000472147 THEMISQ8N1K5 641 aaPredicted RBP9.45□□□□□ -0.9
ITGB1-209ENST00000472147 CFDP1Q9UEE9 299 aaPredicted RBP9.45□□□□□ -0.9
ITGB1-209ENST00000472147 HSPA1LP34931 641 aa9.44□□□□□ -0.9
ITGB1-209ENST00000472147 NKX1-1Q15270 411 aaPredicted RBP9.44□□□□□ -0.9
ITGB1-209ENST00000472147 ANKLE2Q86XL3 938 aa9.44□□□□□ -0.9
ITGB1-209ENST00000472147 ARHGAP35Q9NRY4 1499 aa9.43□□□□□ -0.9
ITGB1-209ENST00000472147 KIAA1107Q9UPP5 1409 aa9.43□□□□□ -0.9
ITGB1-209ENST00000472147 RSPH4AQ5TD94 716 aa9.43□□□□□ -0.9
ITGB1-209ENST00000472147 TTLL13PA6NNM8 815 aa9.42□□□□□ -0.9
ITGB1-209ENST00000472147 PIP4K2BP78356 416 aa9.42□□□□□ -0.9
ITGB1-209ENST00000472147 TMEM106CQ9BVX2 250 aa9.42□□□□□ -0.9
ITGB1-209ENST00000472147 SPATA31D1Q6ZQQ2 1576 aa9.41□□□□□ -0.9
ITGB1-209ENST00000472147 DIP2CQ9Y2E4 1556 aa9.41□□□□□ -0.9
ITGB1-209ENST00000472147 PLA2R1Q13018 1463 aa9.41□□□□□ -0.9
ITGB1-209ENST00000472147 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.41□□□□□ -0.9
ITGB1-209ENST00000472147 CAMSAP1Q5T5Y3 1602 aa9.41□□□□□ -0.9
ITGB1-209ENST00000472147 PTPRKQ15262 1439 aa9.4□□□□□ -0.9
ITGB1-209ENST00000472147 CASKIN1Q8WXD9 1431 aa9.4□□□□□ -0.9
ITGB1-209ENST00000472147 MYO5CQ9NQX4 1742 aa9.4□□□□□ -0.9
ITGB1-209ENST00000472147 PLCB2Q00722 1185 aa9.4□□□□□ -0.9
ITGB1-209ENST00000472147 KIF14Q15058 1648 aa9.4□□□□□ -0.9
ITGB1-209ENST00000472147 TCOF1Q13428 1488 aaKnown RBP9.4□□□□□ -0.91
ITGB1-209ENST00000472147 C3P01024 1663 aa9.39□□□□□ -0.91
ITGB1-209ENST00000472147 IER5LQ5T953 404 aa9.39□□□□□ -0.91
ITGB1-209ENST00000472147 WASHC2CQ9Y4E1 1318 aa9.38□□□□□ -0.91
ITGB1-209ENST00000472147 GPATCH8Q9UKJ3 1502 aaKnown RBP9.38□□□□□ -0.91
ITGB1-209ENST00000472147 FBXO31Q5XUX0 539 aaPredicted RBP9.38□□□□□ -0.91
ITGB1-209ENST00000472147 CABP2Q9NPB3 220 aa9.38□□□□□ -0.91
ITGB1-209ENST00000472147 CCDC18Q5T9S5 1454 aa9.38□□□□□ -0.91
ITGB1-209ENST00000472147 PLEKHH2Q8IVE3 1493 aa9.38□□□□□ -0.91
ITGB1-209ENST00000472147 DHX29Q7Z478 1369 aaKnown RBP9.37□□□□□ -0.91
ITGB1-209ENST00000472147 A2MP01023 1474 aa9.37□□□□□ -0.91
ITGB1-209ENST00000472147 KIF3BO15066 747 aa9.37□□□□□ -0.91
ITGB1-209ENST00000472147 TMEM121BQ9BXQ6 578 aaPredicted RBP9.37□□□□□ -0.91
ITGB1-209ENST00000472147 TRIM35Q9UPQ4 493 aa9.37□□□□□ -0.91
ITGB1-209ENST00000472147 CCNB3Q8WWL7 1395 aa9.37□□□□□ -0.91
ITGB1-209ENST00000472147 GTPBP6O43824 516 aaPredicted RBP9.36□□□□□ -0.91
ITGB1-209ENST00000472147 PAXIP1Q6ZW49 1069 aaPredicted RBP9.36□□□□□ -0.91
ITGB1-209ENST00000472147 EFCAB3Q8N7B9 438 aa9.36□□□□□ -0.91
ITGB1-209ENST00000472147 SPRYD3Q8NCJ5 442 aa9.36□□□□□ -0.91
ITGB1-209ENST00000472147 SHANK2Q9UPX8 1470 aa9.35□□□□□ -0.91
ITGB1-209ENST00000472147 ABCA6Q8N139 1617 aa9.35□□□□□ -0.91
ITGB1-209ENST00000472147 RTEL1-TNFRSF6BF6WH68 1400 aa9.35□□□□□ -0.91
ITGB1-209ENST00000472147 TSPY4P0CV99 314 aa9.35□□□□□ -0.91
ITGB1-209ENST00000472147 TSPY10P0CW01 314 aa9.35□□□□□ -0.91
ITGB1-209ENST00000472147 ABCC1P33527 1531 aa9.35□□□□□ -0.91
ITGB1-209ENST00000472147 KIDINS220Q9ULH0 1771 aa9.35□□□□□ -0.91
ITGB1-209ENST00000472147 A2ML1A8K2U0 1454 aa9.34□□□□□ -0.91
ITGB1-209ENST00000472147 CDC42BPBQ9Y5S2 1711 aa9.34□□□□□ -0.91
ITGB1-209ENST00000472147 SAMD9LQ8IVG5 1584 aa9.34□□□□□ -0.91
ITGB1-209ENST00000472147 TNRQ92752 1358 aa9.34□□□□□ -0.91
ITGB1-209ENST00000472147 ZNF644Q9H582 1327 aaPredicted RBP9.33□□□□□ -0.92
ITGB1-209ENST00000472147 MIA2Q96PC5 1412 aa9.33□□□□□ -0.92
ITGB1-209ENST00000472147 CPS1P31327 1500 aa9.33□□□□□ -0.92
ITGB1-209ENST00000472147 SOX12O15370 315 aa9.33□□□□□ -0.92
ITGB1-209ENST00000472147 CFAP44Q96MT7 982 aa9.33□□□□□ -0.92
ITGB1-209ENST00000472147 MFRPQ9BY79 579 aa9.33□□□□□ -0.92
ITGB1-209ENST00000472147 MROH2AA6NES4 1674 aa9.32□□□□□ -0.92
ITGB1-209ENST00000472147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.32□□□□□ -0.92
ITGB1-209ENST00000472147 FBXO22Q8NEZ5 403 aa9.31□□□□□ -0.92
ITGB1-209ENST00000472147 MARVELD3Q96A59 401 aa9.31□□□□□ -0.92
ITGB1-209ENST00000472147 MTUS2Q5JR59 1369 aa9.31□□□□□ -0.92
ITGB1-209ENST00000472147 CEP170BQ9Y4F5 1589 aaPredicted RBP9.3□□□□□ -0.92
ITGB1-209ENST00000472147 PHF8Q9UPP1 1060 aa9.3□□□□□ -0.92
ITGB1-209ENST00000472147 PREX2Q70Z35 1606 aa9.3□□□□□ -0.92
ITGB1-209ENST00000472147 MED14O60244 1454 aa9.29□□□□□ -0.92
ITGB1-209ENST00000472147 MBD5Q9P267 1494 aa9.29□□□□□ -0.92
ITGB1-209ENST00000472147 RGS17Q9UGC6 210 aaPredicted RBP9.29□□□□□ -0.92
ITGB1-209ENST00000472147 ATP7AQ04656 1500 aa9.29□□□□□ -0.92
ITGB1-209ENST00000472147 FYCO1Q9BQS8 1478 aa9.28□□□□□ -0.92
ITGB1-209ENST00000472147 SNPHO15079 494 aa9.28□□□□□ -0.92
ITGB1-209ENST00000472147 GOLGA2Q08379 1002 aa9.28□□□□□ -0.92
ITGB1-209ENST00000472147 MKRN3Q13064 507 aaKnown RBP9.28□□□□□ -0.92
ITGB1-209ENST00000472147 TXNDC2Q86VQ3 553 aa9.28□□□□□ -0.92
ITGB1-209ENST00000472147 ITSN2Q9NZM3 1697 aa9.28□□□□□ -0.92
ITGB1-209ENST00000472147 NPHP4O75161 1426 aaPredicted RBP9.28□□□□□ -0.92
ITGB1-209ENST00000472147 NLRP1Q9C000 1473 aa9.28□□□□□ -0.92
ITGB1-209ENST00000472147 SYCP2Q9BX26 1530 aa9.27□□□□□ -0.93
ITGB1-209ENST00000472147 FAM135AQ9P2D6 1515 aa9.27□□□□□ -0.93
ITGB1-209ENST00000472147 SLC24A1O60721 1099 aa9.27□□□□□ -0.93
ITGB1-209ENST00000472147 NLRP6P59044 892 aa9.27□□□□□ -0.93
ITGB1-209ENST00000472147 RYDENQ9NUL5 291 aaKnown RBP9.27□□□□□ -0.93
ITGB1-209ENST00000472147 EID1Q9Y6B2 187 aa9.27□□□□□ -0.93
ITGB1-209ENST00000472147 PLXNC1O60486 1568 aa9.27□□□□□ -0.93
ITGB1-209ENST00000472147 DNMT1P26358 1616 aaKnown RBP9.27□□□□□ -0.93
ITGB1-209ENST00000472147 SUPT6HQ7KZ85 1726 aaKnown RBP9.26□□□□□ -0.93
ITGB1-209ENST00000472147 PLCG2P16885 1265 aa9.26□□□□□ -0.93
ITGB1-209ENST00000472147 MS4A4AQ96JQ5 239 aa9.26□□□□□ -0.93
ITGB1-209ENST00000472147 PZPP20742 1482 aa9.26□□□□□ -0.93
ITGB1-209ENST00000472147 CLTCQ00610 1675 aaKnown RBP9.25□□□□□ -0.93
ITGB1-209ENST00000472147 CDC42BPAQ5VT25 1732 aa9.25□□□□□ -0.93
ITGB1-209ENST00000472147 MED1Q15648 1581 aaPredicted RBP9.24□□□□□ -0.93
ITGB1-209ENST00000472147 ZNF142P52746 1687 aaPredicted RBP9.24□□□□□ -0.93
ITGB1-209ENST00000472147 LTKP29376 864 aa9.24□□□□□ -0.93
ITGB1-209ENST00000472147 MYO3AQ8NEV4 1616 aa9.23□□□□□ -0.93
ITGB1-209ENST00000472147 FAM135BQ49AJ0 1406 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms