RNA–Protein interactions for RNA: ENST00000471699.1

CCDC30-207, Transcript of coiled-coil domain containing 30, humanhuman

TSL 3

Gene CCDC30, Length 391 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-207ENST00000471699 MTRQ99707 1265 aa11.33□□□□□ -0.6
CCDC30-207ENST00000471699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.32□□□□□ -0.6
CCDC30-207ENST00000471699 PHOX2BQ99453 314 aa11.31□□□□□ -0.6
CCDC30-207ENST00000471699 SLC10A3P09131 477 aa11.29□□□□□ -0.6
CCDC30-207ENST00000471699 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
CCDC30-207ENST00000471699 ZNF516Q92618 1163 aa11.29□□□□□ -0.6
CCDC30-207ENST00000471699 NECTIN2Q92692 538 aa11.28□□□□□ -0.6
CCDC30-207ENST00000471699 SLC4A3P48751 1232 aa11.27□□□□□ -0.61
CCDC30-207ENST00000471699 IL21Q9HBE4 155 aa11.27□□□□□ -0.61
CCDC30-207ENST00000471699 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCDC30-207ENST00000471699 TULP1O00294 542 aaPredicted RBP11.24□□□□□ -0.61
CCDC30-207ENST00000471699 CFHP08603 1231 aa11.24□□□□□ -0.61
CCDC30-207ENST00000471699 COPS2P61201 443 aa11.24□□□□□ -0.61
CCDC30-207ENST00000471699 RGS20O76081 388 aa11.23□□□□□ -0.61
CCDC30-207ENST00000471699 NKX2-3Q8TAU0 364 aa11.23□□□□□ -0.61
CCDC30-207ENST00000471699 MAP2K5Q13163 448 aa11.22□□□□□ -0.61
CCDC30-207ENST00000471699 BLOC1S3Q6QNY0 202 aa11.22□□□□□ -0.61
CCDC30-207ENST00000471699 PRR14Q9BWN1 585 aa11.21□□□□□ -0.61
CCDC30-207ENST00000471699 PCDHB3Q9Y5E6 796 aa11.21□□□□□ -0.61
CCDC30-207ENST00000471699 ACTN4O43707 911 aaKnown RBP11.2□□□□□ -0.62
CCDC30-207ENST00000471699 DAXXQ9UER7 740 aaPredicted RBP11.2□□□□□ -0.62
CCDC30-207ENST00000471699 ZPR1O75312 459 aa11.19□□□□□ -0.62
CCDC30-207ENST00000471699 LMOD2Q6P5Q4 547 aa11.19□□□□□ -0.62
CCDC30-207ENST00000471699 IRF6O14896 467 aa11.18□□□□□ -0.62
CCDC30-207ENST00000471699 KMT5BQ4FZB7 885 aa11.18□□□□□ -0.62
CCDC30-207ENST00000471699 TLL1O43897 1013 aa11.16□□□□□ -0.62
CCDC30-207ENST00000471699 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
CCDC30-207ENST00000471699 MINK1Q8N4C8 1332 aaPredicted RBP11.15□□□□□ -0.62
CCDC30-207ENST00000471699 CCDC102AQ96A19 550 aa11.15□□□□□ -0.62
CCDC30-207ENST00000471699 DDX11L8A8MPP1 907 aa11.14□□□□□ -0.63
CCDC30-207ENST00000471699 RDH13Q8NBN7 331 aa11.13□□□□□ -0.63
CCDC30-207ENST00000471699 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
CCDC30-207ENST00000471699 RSPH4AQ5TD94 716 aa11.1□□□□□ -0.63
CCDC30-207ENST00000471699 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.1□□□□□ -0.63
CCDC30-207ENST00000471699 GCGRP47871 477 aa11.09□□□□□ -0.63
CCDC30-207ENST00000471699 MDM2Q00987 491 aaPredicted RBP11.09□□□□□ -0.63
CCDC30-207ENST00000471699 SULF1Q8IWU6 871 aa11.09□□□□□ -0.63
CCDC30-207ENST00000471699 ZC3H15Q8WU90 426 aaKnown RBP11.09□□□□□ -0.63
CCDC30-207ENST00000471699 ZMYND10O75800 440 aa11.08□□□□□ -0.64
CCDC30-207ENST00000471699 FUT2Q10981 343 aa11.08□□□□□ -0.64
CCDC30-207ENST00000471699 NR1I2O75469 434 aa11.07□□□□□ -0.64
CCDC30-207ENST00000471699 BARGINQ6ZT62 677 aa11.07□□□□□ -0.64
CCDC30-207ENST00000471699 SCUBE3Q8IX30 993 aa11.07□□□□□ -0.64
CCDC30-207ENST00000471699 MORN1Q5T089 497 aa11.06□□□□□ -0.64
CCDC30-207ENST00000471699 CD46P15529 392 aa11.05□□□□□ -0.64
CCDC30-207ENST00000471699 TMUB1Q9BVT8 246 aa11.05□□□□□ -0.64
CCDC30-207ENST00000471699 RNF223E7ERA6 249 aa11.04□□□□□ -0.64
CCDC30-207ENST00000471699 ADH1BP00325 375 aa11.04□□□□□ -0.64
CCDC30-207ENST00000471699 PRKD2Q9BZL6 878 aa11.04□□□□□ -0.64
CCDC30-207ENST00000471699 S1PR4O95977 384 aa11.03□□□□□ -0.64
CCDC30-207ENST00000471699 EMID1Q96A84 441 aaPredicted RBP11.03□□□□□ -0.64
CCDC30-207ENST00000471699 REPIN1Q9BWE0 567 aaKnown RBP11.03□□□□□ -0.64
CCDC30-207ENST00000471699 IRX2Q9BZI1 471 aaPredicted RBP11.03□□□□□ -0.64
CCDC30-207ENST00000471699 ATP6V1AP38606 617 aa11.02□□□□□ -0.65
CCDC30-207ENST00000471699 THAP11Q96EK4 314 aa11.02□□□□□ -0.65
CCDC30-207ENST00000471699 GGCXP38435 758 aa11.01□□□□□ -0.65
CCDC30-207ENST00000471699 SLC27A5Q9Y2P5 690 aa11.01□□□□□ -0.65
CCDC30-207ENST00000471699 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
CCDC30-207ENST00000471699 FAM217BQ9NTX9 383 aaPredicted RBP11□□□□□ -0.65
CCDC30-207ENST00000471699 V9GY48 417 aaPredicted RBP11□□□□□ -0.65
CCDC30-207ENST00000471699 PPEF1O14829 653 aaPredicted RBP10.99□□□□□ -0.65
CCDC30-207ENST00000471699 CLCN1P35523 988 aa10.99□□□□□ -0.65
CCDC30-207ENST00000471699 SPSB2Q99619 263 aa10.99□□□□□ -0.65
CCDC30-207ENST00000471699 KRI1Q8N9T8 703 aaKnown RBP10.98□□□□□ -0.65
CCDC30-207ENST00000471699 SLC6A16Q9GZN6 736 aa10.97□□□□□ -0.65
CCDC30-207ENST00000471699 FAM160A2Q8N612 972 aaPredicted RBP10.96□□□□□ -0.65
CCDC30-207ENST00000471699 ANKLE1Q8NAG6 615 aa10.96□□□□□ -0.65
CCDC30-207ENST00000471699 HLA-CQ95604 372 aa10.96□□□□□ -0.65
CCDC30-207ENST00000471699 KDM4AO75164 1064 aa10.95□□□□□ -0.66
CCDC30-207ENST00000471699 AMHR2Q16671 573 aa10.95□□□□□ -0.66
CCDC30-207ENST00000471699 PLA2G2CQ5R387 149 aa10.95□□□□□ -0.66
CCDC30-207ENST00000471699 RNF19BQ6ZMZ0 732 aa10.95□□□□□ -0.66
CCDC30-207ENST00000471699 BRICD5Q6PL45 260 aa10.94□□□□□ -0.66
CCDC30-207ENST00000471699 SALL2Q9Y467 1007 aaPredicted RBP10.94□□□□□ -0.66
CCDC30-207ENST00000471699 SLC24A1O60721 1099 aa10.92□□□□□ -0.66
CCDC30-207ENST00000471699 PRDM9Q9NQV7 894 aa10.92□□□□□ -0.66
CCDC30-207ENST00000471699 HOXA2O43364 376 aa10.91□□□□□ -0.66
CCDC30-207ENST00000471699 FMNL1O95466 1100 aaPredicted RBP10.91□□□□□ -0.66
CCDC30-207ENST00000471699 LIAT1Q6ZQX7 453 aa10.91□□□□□ -0.66
CCDC30-207ENST00000471699 SLC19A1P41440 591 aa10.9□□□□□ -0.66
CCDC30-207ENST00000471699 TTLL12Q14166 644 aaPredicted RBP10.9□□□□□ -0.66
CCDC30-207ENST00000471699 GRIPAP1Q4V328 841 aa10.9□□□□□ -0.66
CCDC30-207ENST00000471699 TRIM66O15016 1216 aa10.89□□□□□ -0.67
CCDC30-207ENST00000471699 SSTR3P32745 418 aaPredicted RBP10.89□□□□□ -0.67
CCDC30-207ENST00000471699 USP46P62068 366 aa10.89□□□□□ -0.67
CCDC30-207ENST00000471699 GUCA2AQ02747 115 aa10.89□□□□□ -0.67
CCDC30-207ENST00000471699 GIGYF2Q6Y7W6 1299 aaKnown RBP10.89□□□□□ -0.67
CCDC30-207ENST00000471699 TRIM67Q6ZTA4 783 aa10.88□□□□□ -0.67
CCDC30-207ENST00000471699 PARP9Q8IXQ6 854 aa10.88□□□□□ -0.67
CCDC30-207ENST00000471699 GFRA3O60609 400 aa10.87□□□□□ -0.67
CCDC30-207ENST00000471699 MSS51Q4VC12 460 aa10.87□□□□□ -0.67
CCDC30-207ENST00000471699 SPRYD7Q5W111 196 aa10.87□□□□□ -0.67
CCDC30-207ENST00000471699 LCE2BO14633 110 aa10.86□□□□□ -0.67
CCDC30-207ENST00000471699 Q3C1V9 767 aa10.86□□□□□ -0.67
CCDC30-207ENST00000471699 FCF1Q9Y324 198 aaKnown RBP10.86□□□□□ -0.67
CCDC30-207ENST00000471699 AK7Q96M32 723 aa10.85□□□□□ -0.67
CCDC30-207ENST00000471699 LAPTM4AQ15012 233 aa10.83□□□□□ -0.68
CCDC30-207ENST00000471699 SPIRE2Q8WWL2 714 aa10.83□□□□□ -0.68
CCDC30-207ENST00000471699 PDZRN3Q9UPQ7 1066 aa10.83□□□□□ -0.68
CCDC30-207ENST00000471699 NRG2O14511 850 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms