RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 NEO1Q92859 1461 aa9.03□□□□□ -0.96
SPEN-204ENST00000471538 ERBINQ96RT1 1412 aa9.02□□□□□ -0.97
SPEN-204ENST00000471538 RICTORQ6R327 1708 aa9.02□□□□□ -0.97
SPEN-204ENST00000471538 SOCS7O14512 581 aa9.02□□□□□ -0.97
SPEN-204ENST00000471538 CCDC7Q96M83 1385 aa9.02□□□□□ -0.97
SPEN-204ENST00000471538 RALGAPBQ86X10 1494 aa9.02□□□□□ -0.97
SPEN-204ENST00000471538 KDM5CP41229 1560 aa9.02□□□□□ -0.97
SPEN-204ENST00000471538 CFAP74Q9C0B2 1584 aa9.02□□□□□ -0.97
SPEN-204ENST00000471538 ARID4BQ4LE39 1312 aaPredicted RBP9.01□□□□□ -0.97
SPEN-204ENST00000471538 CNTLNQ9NXG0 1405 aa9.01□□□□□ -0.97
SPEN-204ENST00000471538 ANP32CO43423 234 aa9.01□□□□□ -0.97
SPEN-204ENST00000471538 DISP3Q9P2K9 1392 aa9□□□□□ -0.97
SPEN-204ENST00000471538 C11orf95C9JLR9 678 aaPredicted RBP9□□□□□ -0.97
SPEN-204ENST00000471538 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
SPEN-204ENST00000471538 ZFYVE16Q7Z3T8 1539 aa9□□□□□ -0.97
SPEN-204ENST00000471538 TRAPPC8Q9Y2L5 1435 aa9□□□□□ -0.97
SPEN-204ENST00000471538 ATP10AO60312 1499 aa8.99□□□□□ -0.97
SPEN-204ENST00000471538 PLA2R1Q13018 1463 aa8.99□□□□□ -0.97
SPEN-204ENST00000471538 STAG3Q9UJ98 1225 aa8.99□□□□□ -0.97
SPEN-204ENST00000471538 EFCAB2Q5VUJ9 269 aa8.98□□□□□ -0.97
SPEN-204ENST00000471538 RTEL1-TNFRSF6BF6WH68 1400 aa8.98□□□□□ -0.97
SPEN-204ENST00000471538 YEATS2Q9ULM3 1422 aa8.98□□□□□ -0.97
SPEN-204ENST00000471538 INO80Q9ULG1 1556 aaPredicted RBP8.98□□□□□ -0.97
SPEN-204ENST00000471538 DEPDC5O75140 1603 aa8.98□□□□□ -0.97
SPEN-204ENST00000471538 ASTLQ6HA08 431 aaPredicted RBP8.97□□□□□ -0.97
SPEN-204ENST00000471538 STRCQ7RTU9 1775 aa8.97□□□□□ -0.97
SPEN-204ENST00000471538 FER1L4A9Z1Z3 1794 aa8.97□□□□□ -0.97
SPEN-204ENST00000471538 MNX1P50219 401 aaPredicted RBP8.97□□□□□ -0.97
SPEN-204ENST00000471538 TRPM1Q7Z4N2 1603 aa8.96□□□□□ -0.97
SPEN-204ENST00000471538 KIF7Q2M1P5 1343 aa8.96□□□□□ -0.97
SPEN-204ENST00000471538 USP47Q96K76 1375 aa8.96□□□□□ -0.98
SPEN-204ENST00000471538 SPDYE4A6NLX3 237 aa8.96□□□□□ -0.98
SPEN-204ENST00000471538 ZMYM4Q5VZL5 1548 aa8.95□□□□□ -0.98
SPEN-204ENST00000471538 SPATA31D1Q6ZQQ2 1576 aa8.95□□□□□ -0.98
SPEN-204ENST00000471538 LAMC1P11047 1609 aa8.95□□□□□ -0.98
SPEN-204ENST00000471538 METRNQ9UJH8 293 aa8.95□□□□□ -0.98
SPEN-204ENST00000471538 VWDEQ8N2E2 1590 aa8.95□□□□□ -0.98
SPEN-204ENST00000471538 CCDC144AA2RUR9 1427 aa8.94□□□□□ -0.98
SPEN-204ENST00000471538 PRAG1Q86YV5 1406 aa8.94□□□□□ -0.98
SPEN-204ENST00000471538 FANCAO15360 1455 aa8.94□□□□□ -0.98
SPEN-204ENST00000471538 A2MP01023 1474 aa8.94□□□□□ -0.98
SPEN-204ENST00000471538 ATP7AQ04656 1500 aa8.94□□□□□ -0.98
SPEN-204ENST00000471538 ATMINO43313 823 aaPredicted RBP8.94□□□□□ -0.98
SPEN-204ENST00000471538 EIF2AK4Q9P2K8 1649 aaKnown RBP8.94□□□□□ -0.98
SPEN-204ENST00000471538 E9PCH4 1651 aa8.94□□□□□ -0.98
SPEN-204ENST00000471538 PREX1Q8TCU6 1659 aa8.94□□□□□ -0.98
SPEN-204ENST00000471538 PAK3O75914 559 aaPredicted RBP8.93□□□□□ -0.98
SPEN-204ENST00000471538 MLECQ14165 292 aa8.93□□□□□ -0.98
SPEN-204ENST00000471538 MROH1Q8NDA8 1641 aa8.92□□□□□ -0.98
SPEN-204ENST00000471538 C7P10643 843 aa8.92□□□□□ -0.98
SPEN-204ENST00000471538 GPRASP1Q5JY77 1395 aa8.92□□□□□ -0.98
SPEN-204ENST00000471538 DHX29Q7Z478 1369 aaKnown RBP8.92□□□□□ -0.98
SPEN-204ENST00000471538 TRPM2O94759 1503 aa8.92□□□□□ -0.98
SPEN-204ENST00000471538 RNF17Q9BXT8 1623 aaKnown RBP8.92□□□□□ -0.98
SPEN-204ENST00000471538 TET3O43151 1660 aa8.92□□□□□ -0.98
SPEN-204ENST00000471538 CEBPAP49715 358 aaPredicted RBP8.91□□□□□ -0.98
SPEN-204ENST00000471538 SLC39A7Q92504 469 aa8.91□□□□□ -0.98
SPEN-204ENST00000471538 SPAG9O60271 1321 aaKnown RBP8.91□□□□□ -0.98
SPEN-204ENST00000471538 POGZQ7Z3K3 1410 aa8.91□□□□□ -0.98
SPEN-204ENST00000471538 PRDM15P57071 1507 aaPredicted RBP8.91□□□□□ -0.98
SPEN-204ENST00000471538 MS4A3Q96HJ5 214 aa8.9□□□□□ -0.98
SPEN-204ENST00000471538 PRKRIP1Q9H875 184 aaPredicted RBP8.9□□□□□ -0.98
SPEN-204ENST00000471538 PTPRTO14522 1441 aa8.9□□□□□ -0.98
SPEN-204ENST00000471538 SPHKAPQ2M3C7 1700 aa8.9□□□□□ -0.98
SPEN-204ENST00000471538 KIDINS220Q9ULH0 1771 aa8.9□□□□□ -0.98
SPEN-204ENST00000471538 CEP152O94986 1710 aa8.89□□□□□ -0.99
SPEN-204ENST00000471538 LTBP4Q8N2S1 1624 aa8.89□□□□□ -0.99
SPEN-204ENST00000471538 NEURL4Q96JN8 1562 aa8.89□□□□□ -0.99
SPEN-204ENST00000471538 AFAP1Q8N556 730 aa8.89□□□□□ -0.99
SPEN-204ENST00000471538 DCAF11Q8TEB1 546 aa8.89□□□□□ -0.99
SPEN-204ENST00000471538 SUPT16HQ9Y5B9 1047 aaKnown RBP8.89□□□□□ -0.99
SPEN-204ENST00000471538 SCAPERQ9BY12 1400 aa8.89□□□□□ -0.99
SPEN-204ENST00000471538 ROCK2O75116 1388 aaKnown RBP8.89□□□□□ -0.99
SPEN-204ENST00000471538 ZNF326Q5BKZ1 582 aaKnown RBP8.88□□□□□ -0.99
SPEN-204ENST00000471538 CARD11Q9BXL7 1154 aa8.88□□□□□ -0.99
SPEN-204ENST00000471538 CLTCL1P53675 1640 aa8.88□□□□□ -0.99
SPEN-204ENST00000471538 MAMSTRQ6ZN01 415 aa8.88□□□□□ -0.99
SPEN-204ENST00000471538 CCDC184Q52MB2 194 aa8.87□□□□□ -0.99
SPEN-204ENST00000471538 LMTK2Q8IWU2 1503 aa8.86□□□□□ -0.99
SPEN-204ENST00000471538 ZNF518AQ6AHZ1 1483 aa8.86□□□□□ -0.99
SPEN-204ENST00000471538 KDM2AQ9Y2K7 1162 aa8.86□□□□□ -0.99
SPEN-204ENST00000471538 EFCAB6Q5THR3 1501 aa8.85□□□□□ -0.99
SPEN-204ENST00000471538 SETD1BQ9UPS6 1966 aaKnown RBP8.85□□□□□ -0.99
SPEN-204ENST00000471538 ST20-MTHFSA0A0A6YYL1 179 aa8.85□□□□□ -0.99
SPEN-204ENST00000471538 IQGAP1P46940 1657 aa8.85□□□□□ -0.99
SPEN-204ENST00000471538 C3P01024 1663 aa8.84□□□□□ -0.99
SPEN-204ENST00000471538 MLH3Q9UHC1 1453 aa8.84□□□□□ -0.99
SPEN-204ENST00000471538 POTEFA5A3E0 1075 aa8.84□□□□□ -0.99
SPEN-204ENST00000471538 NBPF1Q3BBV0 1214 aa8.83□□□□□ -1
SPEN-204ENST00000471538 FAM163AQ96GL9 167 aaPredicted RBP8.83□□□□□ -1
SPEN-204ENST00000471538 IFT172Q9UG01 1749 aa8.83□□□□□ -1
SPEN-204ENST00000471538 KIAA1210Q9ULL0 1709 aa8.83□□□□□ -1
SPEN-204ENST00000471538 RGL3Q3MIN7 710 aa8.82□□□□□ -1
SPEN-204ENST00000471538 DIP2CQ9Y2E4 1556 aa8.82□□□□□ -1
SPEN-204ENST00000471538 KANK1Q14678 1352 aa8.82□□□□□ -1
SPEN-204ENST00000471538 ABCA6Q8N139 1617 aa8.82□□□□□ -1
SPEN-204ENST00000471538 IQSEC2Q5JU85 1478 aa8.82□□□□□ -1
SPEN-204ENST00000471538 ATN1P54259 1190 aaPredicted RBP8.81□□□□□ -1
SPEN-204ENST00000471538 HNRNPUQ00839 825 aaKnown RBP eCLIP8.81□□□□□ -1
SPEN-204ENST00000471538 TESK2Q96S53 571 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms