RNA–Protein interactions for RNA: ENST00000471474.5

SEMA3A-206, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 688 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-206ENST00000471474 CLCN1P35523 988 aa11.19□□□□□ -0.62
SEMA3A-206ENST00000471474 SWT1Q5T5J6 900 aaKnown RBP11.19□□□□□ -0.62
SEMA3A-206ENST00000471474 PRKCSHP14314 528 aaPredicted RBP11.18□□□□□ -0.62
SEMA3A-206ENST00000471474 PTPN5P54829 565 aa11.18□□□□□ -0.62
SEMA3A-206ENST00000471474 PPP4CP60510 307 aa11.18□□□□□ -0.62
SEMA3A-206ENST00000471474 MDM2Q00987 491 aaPredicted RBP11.18□□□□□ -0.62
SEMA3A-206ENST00000471474 SULF1Q8IWU6 871 aa11.18□□□□□ -0.62
SEMA3A-206ENST00000471474 RDH13Q8NBN7 331 aa11.17□□□□□ -0.62
SEMA3A-206ENST00000471474 C3orf80F5H4A9 247 aa11.16□□□□□ -0.62
SEMA3A-206ENST00000471474 TMEM134Q9H6X4 195 aa11.16□□□□□ -0.62
SEMA3A-206ENST00000471474 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
SEMA3A-206ENST00000471474 SOWAHBA6NEL2 793 aa11.15□□□□□ -0.62
SEMA3A-206ENST00000471474 DDX11L8A8MPP1 907 aa11.15□□□□□ -0.62
SEMA3A-206ENST00000471474 TRIM66O15016 1216 aa11.15□□□□□ -0.62
SEMA3A-206ENST00000471474 BCAMP50895 628 aa11.15□□□□□ -0.62
SEMA3A-206ENST00000471474 NLRP7Q8WX94 980 aa11.15□□□□□ -0.62
SEMA3A-206ENST00000471474 GPCPD1Q9NPB8 672 aa11.15□□□□□ -0.62
SEMA3A-206ENST00000471474 HPS5Q9UPZ3 1129 aa11.15□□□□□ -0.62
SEMA3A-206ENST00000471474 TSR3Q9UJK0 312 aaKnown RBP11.14□□□□□ -0.63
SEMA3A-206ENST00000471474 THSD4Q6ZMP0 1018 aa11.12□□□□□ -0.63
SEMA3A-206ENST00000471474 HCSTQ9UBK5 93 aa11.12□□□□□ -0.63
SEMA3A-206ENST00000471474 PDE4DQ08499 809 aa11.11□□□□□ -0.63
SEMA3A-206ENST00000471474 MMRN1Q13201 1228 aa11.11□□□□□ -0.63
SEMA3A-206ENST00000471474 PHOX2BQ99453 314 aa11.11□□□□□ -0.63
SEMA3A-206ENST00000471474 PRR14Q9BWN1 585 aa11.11□□□□□ -0.63
SEMA3A-206ENST00000471474 KMT5BQ4FZB7 885 aa11.1□□□□□ -0.63
SEMA3A-206ENST00000471474 NEUROD2Q15784 382 aa11.09□□□□□ -0.63
SEMA3A-206ENST00000471474 AMHR2Q16671 573 aa11.09□□□□□ -0.63
SEMA3A-206ENST00000471474 NYAP1Q6ZVC0 841 aa11.07□□□□□ -0.64
SEMA3A-206ENST00000471474 SSTR3P32745 418 aaPredicted RBP11.06□□□□□ -0.64
SEMA3A-206ENST00000471474 GIGYF2Q6Y7W6 1299 aaKnown RBP11.06□□□□□ -0.64
SEMA3A-206ENST00000471474 WBP1LQ9NX94 342 aa11.05□□□□□ -0.64
SEMA3A-206ENST00000471474 ATP1B4Q9UN42 357 aaPredicted RBP11.05□□□□□ -0.64
SEMA3A-206ENST00000471474 CFHP08603 1231 aa11.04□□□□□ -0.64
SEMA3A-206ENST00000471474 NUTM1Q86Y26 1132 aa11.04□□□□□ -0.64
SEMA3A-206ENST00000471474 GRIPAP1Q4V328 841 aa11.03□□□□□ -0.64
SEMA3A-206ENST00000471474 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
SEMA3A-206ENST00000471474 FAM217BQ9NTX9 383 aaPredicted RBP11.02□□□□□ -0.65
SEMA3A-206ENST00000471474 SLC10A3P09131 477 aa10.98□□□□□ -0.65
SEMA3A-206ENST00000471474 DIXDC1Q155Q3 683 aa10.98□□□□□ -0.65
SEMA3A-206ENST00000471474 BEGAINQ9BUH8 593 aa10.98□□□□□ -0.65
SEMA3A-206ENST00000471474 KDM4CQ9H3R0 1056 aa10.98□□□□□ -0.65
SEMA3A-206ENST00000471474 PCDHB3Q9Y5E6 796 aa10.98□□□□□ -0.65
SEMA3A-206ENST00000471474 CD46P15529 392 aa10.97□□□□□ -0.65
SEMA3A-206ENST00000471474 GPBP1L1Q9HC44 474 aaPredicted RBP10.97□□□□□ -0.65
SEMA3A-206ENST00000471474 KDM4AO75164 1064 aa10.96□□□□□ -0.65
SEMA3A-206ENST00000471474 GCGRP47871 477 aa10.96□□□□□ -0.65
SEMA3A-206ENST00000471474 REPIN1Q9BWE0 567 aaKnown RBP10.96□□□□□ -0.65
SEMA3A-206ENST00000471474 APLP1P51693 650 aa10.95□□□□□ -0.66
SEMA3A-206ENST00000471474 DDRGK1Q96HY6 314 aa10.95□□□□□ -0.66
SEMA3A-206ENST00000471474 USP46P62068 366 aa10.94□□□□□ -0.66
SEMA3A-206ENST00000471474 TMUB1Q9BVT8 246 aa10.94□□□□□ -0.66
SEMA3A-206ENST00000471474 ACTN4O43707 911 aaKnown RBP10.93□□□□□ -0.66
SEMA3A-206ENST00000471474 ATP6V1AP38606 617 aa10.93□□□□□ -0.66
SEMA3A-206ENST00000471474 NR1I2O75469 434 aa10.92□□□□□ -0.66
SEMA3A-206ENST00000471474 MS4A1P11836 297 aa10.92□□□□□ -0.66
SEMA3A-206ENST00000471474 COPS2P61201 443 aa10.92□□□□□ -0.66
SEMA3A-206ENST00000471474 RSPH6AQ9H0K4 717 aa10.92□□□□□ -0.66
SEMA3A-206ENST00000471474 BRPF1P55201 1214 aaPredicted RBP10.91□□□□□ -0.66
SEMA3A-206ENST00000471474 FUT2Q10981 343 aa10.91□□□□□ -0.66
SEMA3A-206ENST00000471474 PUS10Q3MIT2 529 aaKnown RBP10.89□□□□□ -0.67
SEMA3A-206ENST00000471474 IL27Q8NEV9 243 aa10.89□□□□□ -0.67
SEMA3A-206ENST00000471474 IL21Q9HBE4 155 aa10.89□□□□□ -0.67
SEMA3A-206ENST00000471474 KCNC4Q03721 635 aa10.88□□□□□ -0.67
SEMA3A-206ENST00000471474 MTRQ99707 1265 aa10.87□□□□□ -0.67
SEMA3A-206ENST00000471474 Q3C1V9 767 aa10.86□□□□□ -0.67
SEMA3A-206ENST00000471474 BLOC1S3Q6QNY0 202 aa10.86□□□□□ -0.67
SEMA3A-206ENST00000471474 TBC1D2Q9BYX2 928 aa10.86□□□□□ -0.67
SEMA3A-206ENST00000471474 FAM117AQ9C073 453 aa10.86□□□□□ -0.67
SEMA3A-206ENST00000471474 SPIRE2Q8WWL2 714 aa10.85□□□□□ -0.67
SEMA3A-206ENST00000471474 HOXA2O43364 376 aa10.83□□□□□ -0.68
SEMA3A-206ENST00000471474 PLA2G2EQ9NZK7 142 aa10.83□□□□□ -0.68
SEMA3A-206ENST00000471474 FMNL1O95466 1100 aaPredicted RBP10.82□□□□□ -0.68
SEMA3A-206ENST00000471474 FDX1P10109 184 aa10.82□□□□□ -0.68
SEMA3A-206ENST00000471474 SCUBE3Q8IX30 993 aa10.82□□□□□ -0.68
SEMA3A-206ENST00000471474 C6orf229H3BNL8 230 aa10.81□□□□□ -0.68
SEMA3A-206ENST00000471474 ZPR1O75312 459 aa10.81□□□□□ -0.68
SEMA3A-206ENST00000471474 CSPP1Q1MSJ5 1256 aa10.81□□□□□ -0.68
SEMA3A-206ENST00000471474 MORN1Q5T089 497 aa10.81□□□□□ -0.68
SEMA3A-206ENST00000471474 RIC3Q7Z5B4 369 aa10.81□□□□□ -0.68
SEMA3A-206ENST00000471474 POLR3EQ9NVU0 708 aa10.81□□□□□ -0.68
SEMA3A-206ENST00000471474 NUTM2BA6NNL0 878 aaPredicted RBP10.8□□□□□ -0.68
SEMA3A-206ENST00000471474 NUTM2EB1AL46 878 aaPredicted RBP10.8□□□□□ -0.68
SEMA3A-206ENST00000471474 GGCXP38435 758 aa10.8□□□□□ -0.68
SEMA3A-206ENST00000471474 NUTM2DQ5VT03 806 aaPredicted RBP10.8□□□□□ -0.68
SEMA3A-206ENST00000471474 NUTM2AQ8IVF1 878 aaPredicted RBP10.8□□□□□ -0.68
SEMA3A-206ENST00000471474 SLC27A5Q9Y2P5 690 aa10.8□□□□□ -0.68
SEMA3A-206ENST00000471474 MOXD2PA6NHM9 499 aa10.79□□□□□ -0.68
SEMA3A-206ENST00000471474 NDUFV2P19404 249 aa10.79□□□□□ -0.68
SEMA3A-206ENST00000471474 TJAP1Q5JTD0 557 aa10.79□□□□□ -0.68
SEMA3A-206ENST00000471474 PCMTD1Q96MG8 357 aaPredicted RBP10.79□□□□□ -0.68
SEMA3A-206ENST00000471474 SPSB2Q99619 263 aa10.78□□□□□ -0.68
SEMA3A-206ENST00000471474 CLK2P49760 499 aaKnown RBP10.77□□□□□ -0.69
SEMA3A-206ENST00000471474 MYSM1Q5VVJ2 828 aa10.77□□□□□ -0.69
SEMA3A-206ENST00000471474 ZNF516Q92618 1163 aa10.77□□□□□ -0.69
SEMA3A-206ENST00000471474 ITGBL1O95965 494 aaPredicted RBP10.76□□□□□ -0.69
SEMA3A-206ENST00000471474 GUCA2AQ02747 115 aa10.76□□□□□ -0.69
SEMA3A-206ENST00000471474 SKIV2LQ15477 1246 aaKnown RBP10.76□□□□□ -0.69
SEMA3A-206ENST00000471474 SH3D19Q5HYK7 790 aa10.75□□□□□ -0.69
SEMA3A-206ENST00000471474 RSBN1LQ6PCB5 846 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms