RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 PPLO60437 1756 aa16.78■□□□□ 0.28
LINC00880-201ENST00000471357 LAMC1P11047 1609 aa16.77■□□□□ 0.28
LINC00880-201ENST00000471357 TNRQ92752 1358 aa16.77■□□□□ 0.27
LINC00880-201ENST00000471357 VGFO15240 615 aaPredicted RBP16.77■□□□□ 0.27
LINC00880-201ENST00000471357 FER1L4A9Z1Z3 1794 aa16.76■□□□□ 0.27
LINC00880-201ENST00000471357 NEXMIFQ5QGS0 1516 aa16.76■□□□□ 0.27
LINC00880-201ENST00000471357 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
LINC00880-201ENST00000471357 KIAA1210Q9ULL0 1709 aa16.75■□□□□ 0.27
LINC00880-201ENST00000471357 CEBPAP49715 358 aaPredicted RBP16.75■□□□□ 0.27
LINC00880-201ENST00000471357 CFAP70Q5T0N1 1121 aa16.75■□□□□ 0.27
LINC00880-201ENST00000471357 ST20-MTHFSA0A0A6YYL1 179 aa16.74■□□□□ 0.27
LINC00880-201ENST00000471357 WASHC2AQ641Q2 1341 aa16.74■□□□□ 0.27
LINC00880-201ENST00000471357 MYO5BQ9ULV0 1848 aa16.74■□□□□ 0.27
LINC00880-201ENST00000471357 PIK3C2GO75747 1445 aa16.73■□□□□ 0.27
LINC00880-201ENST00000471357 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
LINC00880-201ENST00000471357 C11orf95C9JLR9 678 aaPredicted RBP16.73■□□□□ 0.27
LINC00880-201ENST00000471357 NUTM2DQ5VT03 806 aaPredicted RBP16.73■□□□□ 0.27
LINC00880-201ENST00000471357 A2ML1A8K2U0 1454 aa16.73■□□□□ 0.27
LINC00880-201ENST00000471357 C3P01024 1663 aa16.72■□□□□ 0.27
LINC00880-201ENST00000471357 C14orf93Q9H972 538 aaKnown RBP16.71■□□□□ 0.27
LINC00880-201ENST00000471357 CCDC7Q96M83 1385 aa16.71■□□□□ 0.27
LINC00880-201ENST00000471357 SCAF11Q99590 1463 aaKnown RBP16.69■□□□□ 0.26
LINC00880-201ENST00000471357 KIF7Q2M1P5 1343 aa16.69■□□□□ 0.26
LINC00880-201ENST00000471357 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
LINC00880-201ENST00000471357 NLRP1Q9C000 1473 aa16.68■□□□□ 0.26
LINC00880-201ENST00000471357 MIER1Q8N108 512 aa16.67■□□□□ 0.26
LINC00880-201ENST00000471357 RIMS2Q9UQ26 1411 aa16.67■□□□□ 0.26
LINC00880-201ENST00000471357 IQGAP1P46940 1657 aa16.66■□□□□ 0.26
LINC00880-201ENST00000471357 ADAMTSL3P82987 1691 aa16.66■□□□□ 0.26
LINC00880-201ENST00000471357 SETBP1Q9Y6X0 1596 aa16.66■□□□□ 0.26
LINC00880-201ENST00000471357 POLR1AO95602 1720 aaPredicted RBP16.66■□□□□ 0.26
LINC00880-201ENST00000471357 KDM5AP29375 1690 aaKnown RBP16.65■□□□□ 0.26
LINC00880-201ENST00000471357 RIMS1Q86UR5 1692 aaKnown RBP16.65■□□□□ 0.26
LINC00880-201ENST00000471357 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.65■□□□□ 0.26
LINC00880-201ENST00000471357 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
LINC00880-201ENST00000471357 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
LINC00880-201ENST00000471357 TESK2Q96S53 571 aa16.64■□□□□ 0.25
LINC00880-201ENST00000471357 UBR1Q8IWV7 1749 aa16.63■□□□□ 0.25
LINC00880-201ENST00000471357 TMEM132EQ6IEE7 984 aa16.63■□□□□ 0.25
LINC00880-201ENST00000471357 ADGRB1O14514 1584 aa16.63■□□□□ 0.25
LINC00880-201ENST00000471357 TMEM2Q9UHN6 1383 aa16.62■□□□□ 0.25
LINC00880-201ENST00000471357 POLR3GLQ9BT43 218 aa16.62■□□□□ 0.25
LINC00880-201ENST00000471357 TMF1P82094 1093 aa16.61■□□□□ 0.25
LINC00880-201ENST00000471357 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
LINC00880-201ENST00000471357 TRAK1Q9UPV9 953 aa16.59■□□□□ 0.25
LINC00880-201ENST00000471357 SLC24A1O60721 1099 aa16.58■□□□□ 0.24
LINC00880-201ENST00000471357 THEMISQ8N1K5 641 aaPredicted RBP16.58■□□□□ 0.24
LINC00880-201ENST00000471357 ALKQ9UM73 1620 aa16.57■□□□□ 0.24
LINC00880-201ENST00000471357 MYO3AQ8NEV4 1616 aa16.57■□□□□ 0.24
LINC00880-201ENST00000471357 DISP3Q9P2K9 1392 aa16.57■□□□□ 0.24
LINC00880-201ENST00000471357 ANP32CO43423 234 aa16.56■□□□□ 0.24
LINC00880-201ENST00000471357 CENPJQ9HC77 1338 aaPredicted RBP16.56■□□□□ 0.24
LINC00880-201ENST00000471357 EID1Q9Y6B2 187 aa16.55■□□□□ 0.24
LINC00880-201ENST00000471357 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
LINC00880-201ENST00000471357 CDCA8Q53HL2 280 aa16.54■□□□□ 0.24
LINC00880-201ENST00000471357 TXNDC2Q86VQ3 553 aa16.54■□□□□ 0.24
LINC00880-201ENST00000471357 SLIT1O75093 1534 aa16.53■□□□□ 0.24
LINC00880-201ENST00000471357 ARHGAP23Q9P227 1491 aa16.53■□□□□ 0.24
LINC00880-201ENST00000471357 LTKP29376 864 aa16.53■□□□□ 0.24
LINC00880-201ENST00000471357 SBNO2Q9Y2G9 1366 aa16.53■□□□□ 0.24
LINC00880-201ENST00000471357 BCANQ96GW7 911 aa16.53■□□□□ 0.24
LINC00880-201ENST00000471357 STK26Q9P289 416 aa16.53■□□□□ 0.24
LINC00880-201ENST00000471357 CEP170BQ9Y4F5 1589 aaPredicted RBP16.52■□□□□ 0.24
LINC00880-201ENST00000471357 PTPRMP28827 1452 aa16.52■□□□□ 0.24
LINC00880-201ENST00000471357 YTHDC2Q9H6S0 1430 aaKnown RBP16.52■□□□□ 0.24
LINC00880-201ENST00000471357 SETD1BQ9UPS6 1966 aaKnown RBP16.52■□□□□ 0.24
LINC00880-201ENST00000471357 PLEKHG1Q9ULL1 1385 aa16.52■□□□□ 0.23
LINC00880-201ENST00000471357 NRXN3Q9Y4C0 1643 aa16.52■□□□□ 0.23
LINC00880-201ENST00000471357 SETD1AO15047 1707 aaKnown RBP16.49■□□□□ 0.23
LINC00880-201ENST00000471357 ARHGEF28Q8N1W1 1705 aaKnown RBP16.49■□□□□ 0.23
LINC00880-201ENST00000471357 LRPPRCP42704 1394 aaKnown RBP16.48■□□□□ 0.23
LINC00880-201ENST00000471357 METP08581 1390 aa16.48■□□□□ 0.23
LINC00880-201ENST00000471357 QRICH2Q9H0J4 1663 aa16.47■□□□□ 0.23
LINC00880-201ENST00000471357 ZNF142P52746 1687 aaPredicted RBP16.47■□□□□ 0.23
LINC00880-201ENST00000471357 ADAMTS13Q76LX8 1427 aa16.47■□□□□ 0.23
LINC00880-201ENST00000471357 ABCC11Q96J66 1382 aa16.46■□□□□ 0.23
LINC00880-201ENST00000471357 POGKQ9P215 609 aa16.46■□□□□ 0.23
LINC00880-201ENST00000471357 PRAM1Q96QH2 718 aa16.45■□□□□ 0.22
LINC00880-201ENST00000471357 DLC1Q96QB1 1528 aa16.45■□□□□ 0.22
LINC00880-201ENST00000471357 CCER2I3L3R5 266 aa16.44■□□□□ 0.22
LINC00880-201ENST00000471357 SAFB2Q14151 953 aaKnown RBP eCLIP16.44■□□□□ 0.22
LINC00880-201ENST00000471357 MED14O60244 1454 aa16.44■□□□□ 0.22
LINC00880-201ENST00000471357 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
LINC00880-201ENST00000471357 EVC2Q86UK5 1308 aa16.43■□□□□ 0.22
LINC00880-201ENST00000471357 SLC26A8Q96RN1 970 aa16.43■□□□□ 0.22
LINC00880-201ENST00000471357 PRKRIP1Q9H875 184 aaPredicted RBP16.43■□□□□ 0.22
LINC00880-201ENST00000471357 PANK3Q9H999 370 aa16.43■□□□□ 0.22
LINC00880-201ENST00000471357 TBX22Q9Y458 520 aa16.43■□□□□ 0.22
LINC00880-201ENST00000471357 SIRT1Q96EB6 747 aa16.41■□□□□ 0.22
LINC00880-201ENST00000471357 PUS7Q96PZ0 661 aaKnown RBP16.41■□□□□ 0.22
LINC00880-201ENST00000471357 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
LINC00880-201ENST00000471357 WAPLQ7Z5K2 1190 aa16.4■□□□□ 0.22
LINC00880-201ENST00000471357 TECPR2O15040 1411 aa16.4■□□□□ 0.22
LINC00880-201ENST00000471357 MINK1Q8N4C8 1332 aaPredicted RBP16.39■□□□□ 0.22
LINC00880-201ENST00000471357 TULP4Q9NRJ4 1543 aa16.39■□□□□ 0.21
LINC00880-201ENST00000471357 DIP2AQ14689 1571 aa16.39■□□□□ 0.21
LINC00880-201ENST00000471357 KDM4FA0A1W2PPD8 638 aa16.38■□□□□ 0.21
LINC00880-201ENST00000471357 FAM135BQ49AJ0 1406 aa16.38■□□□□ 0.21
LINC00880-201ENST00000471357 KNDC1Q76NI1 1749 aa16.38■□□□□ 0.21
LINC00880-201ENST00000471357 PLEKHH1Q9ULM0 1364 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms