RNA–Protein interactions for RNA: ENST00000471145.1

NPHP3-205, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-205ENST00000471145 PXYLP1Q8TE99 480 aa10.06□□□□□ -0.8
NPHP3-205ENST00000471145 TMEM134Q9H6X4 195 aa10.05□□□□□ -0.8
NPHP3-205ENST00000471145 METTL3Q86U44 580 aaKnown RBP10.03□□□□□ -0.8
NPHP3-205ENST00000471145 RNF40O75150 1001 aa10.02□□□□□ -0.81
NPHP3-205ENST00000471145 ITGBL1O95965 494 aaPredicted RBP10.02□□□□□ -0.81
NPHP3-205ENST00000471145 LMOD2Q6P5Q4 547 aa10.02□□□□□ -0.81
NPHP3-205ENST00000471145 MAP2K5Q13163 448 aa9.99□□□□□ -0.81
NPHP3-205ENST00000471145 MINK1Q8N4C8 1332 aaPredicted RBP9.99□□□□□ -0.81
NPHP3-205ENST00000471145 PRR14Q9BWN1 585 aa9.98□□□□□ -0.81
NPHP3-205ENST00000471145 IRF6O14896 467 aa9.97□□□□□ -0.81
NPHP3-205ENST00000471145 KCNC4Q03721 635 aa9.97□□□□□ -0.81
NPHP3-205ENST00000471145 DAXXQ9UER7 740 aaPredicted RBP9.97□□□□□ -0.81
NPHP3-205ENST00000471145 APLP1P51693 650 aa9.96□□□□□ -0.82
NPHP3-205ENST00000471145 RSPH4AQ5TD94 716 aa9.96□□□□□ -0.82
NPHP3-205ENST00000471145 TJAP1Q5JTD0 557 aa9.94□□□□□ -0.82
NPHP3-205ENST00000471145 PHOX2BQ99453 314 aa9.93□□□□□ -0.82
NPHP3-205ENST00000471145 IL21Q9HBE4 155 aa9.93□□□□□ -0.82
NPHP3-205ENST00000471145 SLC10A3P09131 477 aa9.92□□□□□ -0.82
NPHP3-205ENST00000471145 KMT5BQ4FZB7 885 aa9.92□□□□□ -0.82
NPHP3-205ENST00000471145 MTRQ99707 1265 aa9.92□□□□□ -0.82
NPHP3-205ENST00000471145 ZMYND10O75800 440 aa9.91□□□□□ -0.82
NPHP3-205ENST00000471145 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
NPHP3-205ENST00000471145 ZC3H15Q8WU90 426 aaKnown RBP9.91□□□□□ -0.82
NPHP3-205ENST00000471145 A0A0G2JS52 829 aa9.9□□□□□ -0.82
NPHP3-205ENST00000471145 ACTN4O43707 911 aaKnown RBP9.9□□□□□ -0.82
NPHP3-205ENST00000471145 CFHP08603 1231 aa9.89□□□□□ -0.83
NPHP3-205ENST00000471145 SULF1Q8IWU6 871 aa9.89□□□□□ -0.83
NPHP3-205ENST00000471145 KRI1Q8N9T8 703 aaKnown RBP9.89□□□□□ -0.83
NPHP3-205ENST00000471145 NLRP7Q8WX94 980 aa9.88□□□□□ -0.83
NPHP3-205ENST00000471145 CCDC102AQ96A19 550 aa9.88□□□□□ -0.83
NPHP3-205ENST00000471145 PCDHB3Q9Y5E6 796 aa9.88□□□□□ -0.83
NPHP3-205ENST00000471145 RGS20O76081 388 aa9.87□□□□□ -0.83
NPHP3-205ENST00000471145 DDX11L8A8MPP1 907 aa9.86□□□□□ -0.83
NPHP3-205ENST00000471145 RDH13Q8NBN7 331 aa9.86□□□□□ -0.83
NPHP3-205ENST00000471145 ZNF516Q92618 1163 aa9.86□□□□□ -0.83
NPHP3-205ENST00000471145 COPS2P61201 443 aa9.85□□□□□ -0.83
NPHP3-205ENST00000471145 ZPR1O75312 459 aa9.84□□□□□ -0.83
NPHP3-205ENST00000471145 MDM2Q00987 491 aaPredicted RBP9.83□□□□□ -0.84
NPHP3-205ENST00000471145 CLCN1P35523 988 aa9.82□□□□□ -0.84
NPHP3-205ENST00000471145 GCGRP47871 477 aa9.82□□□□□ -0.84
NPHP3-205ENST00000471145 BLOC1S3Q6QNY0 202 aa9.82□□□□□ -0.84
NPHP3-205ENST00000471145 NR1I2O75469 434 aa9.81□□□□□ -0.84
NPHP3-205ENST00000471145 GPCPD1Q9NPB8 672 aa9.81□□□□□ -0.84
NPHP3-205ENST00000471145 CD46P15529 392 aa9.79□□□□□ -0.84
NPHP3-205ENST00000471145 NKX2-3Q8TAU0 364 aa9.79□□□□□ -0.84
NPHP3-205ENST00000471145 TMUB1Q9BVT8 246 aa9.79□□□□□ -0.84
NPHP3-205ENST00000471145 ATP6V1AP38606 617 aa9.78□□□□□ -0.84
NPHP3-205ENST00000471145 SCUBE3Q8IX30 993 aa9.78□□□□□ -0.84
NPHP3-205ENST00000471145 AK7Q96M32 723 aa9.77□□□□□ -0.85
NPHP3-205ENST00000471145 GGCXP38435 758 aa9.76□□□□□ -0.85
NPHP3-205ENST00000471145 FUT2Q10981 343 aa9.76□□□□□ -0.85
NPHP3-205ENST00000471145 AMHR2Q16671 573 aa9.76□□□□□ -0.85
NPHP3-205ENST00000471145 GRIPAP1Q4V328 841 aa9.76□□□□□ -0.85
NPHP3-205ENST00000471145 PPP1R18Q6NYC8 613 aa9.76□□□□□ -0.85
NPHP3-205ENST00000471145 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.76□□□□□ -0.85
NPHP3-205ENST00000471145 FAM217BQ9NTX9 383 aaPredicted RBP9.76□□□□□ -0.85
NPHP3-205ENST00000471145 PUS10Q3MIT2 529 aaKnown RBP9.75□□□□□ -0.85
NPHP3-205ENST00000471145 MORN1Q5T089 497 aa9.75□□□□□ -0.85
NPHP3-205ENST00000471145 TRIM66O15016 1216 aa9.73□□□□□ -0.85
NPHP3-205ENST00000471145 USP46P62068 366 aa9.73□□□□□ -0.85
NPHP3-205ENST00000471145 REPIN1Q9BWE0 567 aaKnown RBP9.73□□□□□ -0.85
NPHP3-205ENST00000471145 KDM4AO75164 1064 aa9.72□□□□□ -0.85
NPHP3-205ENST00000471145 ADH1BP00325 375 aa9.72□□□□□ -0.85
NPHP3-205ENST00000471145 SLC24A3Q9HC58 644 aa9.72□□□□□ -0.85
NPHP3-205ENST00000471145 SALL2Q9Y467 1007 aaPredicted RBP9.72□□□□□ -0.85
NPHP3-205ENST00000471145 SSTR3P32745 418 aaPredicted RBP9.71□□□□□ -0.86
NPHP3-205ENST00000471145 TTLL12Q14166 644 aaPredicted RBP9.71□□□□□ -0.86
NPHP3-205ENST00000471145 SLC27A5Q9Y2P5 690 aa9.71□□□□□ -0.86
NPHP3-205ENST00000471145 TLL1O43897 1013 aa9.7□□□□□ -0.86
NPHP3-205ENST00000471145 THAP11Q96EK4 314 aa9.69□□□□□ -0.86
NPHP3-205ENST00000471145 SPSB2Q99619 263 aa9.69□□□□□ -0.86
NPHP3-205ENST00000471145 FMNL1O95466 1100 aaPredicted RBP9.68□□□□□ -0.86
NPHP3-205ENST00000471145 GIGYF2Q6Y7W6 1299 aaKnown RBP9.68□□□□□ -0.86
NPHP3-205ENST00000471145 Q3C1V9 767 aa9.67□□□□□ -0.86
NPHP3-205ENST00000471145 BRICD5Q6PL45 260 aa9.67□□□□□ -0.86
NPHP3-205ENST00000471145 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
NPHP3-205ENST00000471145 SLC6A16Q9GZN6 736 aa9.67□□□□□ -0.86
NPHP3-205ENST00000471145 RNF223E7ERA6 249 aa9.66□□□□□ -0.86
NPHP3-205ENST00000471145 S1PR4O95977 384 aa9.66□□□□□ -0.86
NPHP3-205ENST00000471145 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
NPHP3-205ENST00000471145 V9GY48 417 aaPredicted RBP9.66□□□□□ -0.86
NPHP3-205ENST00000471145 PARP9Q8IXQ6 854 aa9.65□□□□□ -0.86
NPHP3-205ENST00000471145 ANKLE1Q8NAG6 615 aa9.65□□□□□ -0.86
NPHP3-205ENST00000471145 PRKD2Q9BZL6 878 aa9.65□□□□□ -0.86
NPHP3-205ENST00000471145 HOXA2O43364 376 aa9.64□□□□□ -0.87
NPHP3-205ENST00000471145 PDE4DQ08499 809 aa9.64□□□□□ -0.87
NPHP3-205ENST00000471145 NEUROD2Q15784 382 aa9.63□□□□□ -0.87
NPHP3-205ENST00000471145 FAM160A2Q8N612 972 aaPredicted RBP9.62□□□□□ -0.87
NPHP3-205ENST00000471145 BEGAINQ9BUH8 593 aa9.62□□□□□ -0.87
NPHP3-205ENST00000471145 DIXDC1Q155Q3 683 aa9.61□□□□□ -0.87
NPHP3-205ENST00000471145 MSS51Q4VC12 460 aa9.61□□□□□ -0.87
NPHP3-205ENST00000471145 RNF19BQ6ZMZ0 732 aa9.61□□□□□ -0.87
NPHP3-205ENST00000471145 SPIRE2Q8WWL2 714 aa9.61□□□□□ -0.87
NPHP3-205ENST00000471145 IRX2Q9BZI1 471 aaPredicted RBP9.61□□□□□ -0.87
NPHP3-205ENST00000471145 PPEF1O14829 653 aaPredicted RBP9.59□□□□□ -0.87
NPHP3-205ENST00000471145 SLC19A1P41440 591 aa9.59□□□□□ -0.87
NPHP3-205ENST00000471145 TMEM132AQ24JP5 1023 aa9.59□□□□□ -0.87
NPHP3-205ENST00000471145 USB1Q9BQ65 265 aaKnown RBP9.59□□□□□ -0.87
NPHP3-205ENST00000471145 MS4A1P11836 297 aa9.58□□□□□ -0.88
NPHP3-205ENST00000471145 HLA-CQ95604 372 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms