RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 BCANQ96GW7 911 aa23.54■■□□□ 1.36
CNOT3-206ENST00000471126 CFAP65Q6ZU64 1925 aaKnown RBP23.53■■□□□ 1.36
CNOT3-206ENST00000471126 EIF2AK4Q9P2K8 1649 aaKnown RBP23.53■■□□□ 1.36
CNOT3-206ENST00000471126 ZRANB1Q9UGI0 708 aa23.53■■□□□ 1.36
CNOT3-206ENST00000471126 IDI1Q13907 227 aa23.52■■□□□ 1.36
CNOT3-206ENST00000471126 ARHGAP31Q2M1Z3 1444 aa23.51■■□□□ 1.35
CNOT3-206ENST00000471126 DUOX2Q9NRD8 1548 aa23.51■■□□□ 1.35
CNOT3-206ENST00000471126 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
CNOT3-206ENST00000471126 MROH1Q8NDA8 1641 aa23.51■■□□□ 1.35
CNOT3-206ENST00000471126 RGS12O14924 1447 aa23.5■■□□□ 1.35
CNOT3-206ENST00000471126 QTRT2Q9H974 415 aaKnown RBP23.5■■□□□ 1.35
CNOT3-206ENST00000471126 RBM6P78332 1123 aaKnown RBP23.49■■□□□ 1.35
CNOT3-206ENST00000471126 PIK3C2BO00750 1634 aa23.48■■□□□ 1.35
CNOT3-206ENST00000471126 NWD1Q149M9 1564 aa23.48■■□□□ 1.35
CNOT3-206ENST00000471126 CEP152O94986 1710 aa23.47■■□□□ 1.35
CNOT3-206ENST00000471126 FOXD1Q16676 465 aa23.47■■□□□ 1.35
CNOT3-206ENST00000471126 C14orf37Q86TY3 774 aa23.47■■□□□ 1.35
CNOT3-206ENST00000471126 EFCAB6Q5THR3 1501 aa23.47■■□□□ 1.35
CNOT3-206ENST00000471126 KIF15Q9NS87 1388 aa23.46■■□□□ 1.35
CNOT3-206ENST00000471126 ERBINQ96RT1 1412 aa23.45■■□□□ 1.34
CNOT3-206ENST00000471126 FAM50AQ14320 339 aaKnown RBP23.45■■□□□ 1.34
CNOT3-206ENST00000471126 ANKRD30AQ9BXX3 1397 aa23.43■■□□□ 1.34
CNOT3-206ENST00000471126 CADPS2Q86UW7 1296 aa23.43■■□□□ 1.34
CNOT3-206ENST00000471126 C8orf37Q96NL8 207 aa23.43■■□□□ 1.34
CNOT3-206ENST00000471126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.43■■□□□ 1.34
CNOT3-206ENST00000471126 SHPRHQ149N8 1683 aa23.43■■□□□ 1.34
CNOT3-206ENST00000471126 AHDC1Q5TGY3 1603 aaPredicted RBP23.42■■□□□ 1.34
CNOT3-206ENST00000471126 ROCK1Q13464 1354 aa23.41■■□□□ 1.34
CNOT3-206ENST00000471126 ATF3P18847 181 aa23.41■■□□□ 1.34
CNOT3-206ENST00000471126 SETBP1Q9Y6X0 1596 aa23.4■■□□□ 1.34
CNOT3-206ENST00000471126 C19orf44Q9H6X5 657 aa23.4■■□□□ 1.34
CNOT3-206ENST00000471126 NCOA3Q9Y6Q9 1424 aa23.4■■□□□ 1.34
CNOT3-206ENST00000471126 ATAD2Q6PL18 1390 aa23.4■■□□□ 1.34
CNOT3-206ENST00000471126 KDM5AP29375 1690 aaKnown RBP23.39■■□□□ 1.34
CNOT3-206ENST00000471126 BRINP3Q76B58 766 aa23.39■■□□□ 1.33
CNOT3-206ENST00000471126 NGLY1Q96IV0 654 aa23.36■■□□□ 1.33
CNOT3-206ENST00000471126 RRP7BPQ9NSQ0 103 aa23.36■■□□□ 1.33
CNOT3-206ENST00000471126 CHIC2Q9UKJ5 165 aa23.35■■□□□ 1.33
CNOT3-206ENST00000471126 DIP2AQ14689 1571 aa23.35■■□□□ 1.33
CNOT3-206ENST00000471126 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
CNOT3-206ENST00000471126 PLEKHG1Q9ULL1 1385 aa23.31■■□□□ 1.32
CNOT3-206ENST00000471126 PPP1R15AO75807 674 aaPredicted RBP23.31■■□□□ 1.32
CNOT3-206ENST00000471126 LRRC59Q96AG4 307 aaKnown RBP23.31■■□□□ 1.32
CNOT3-206ENST00000471126 ANKRD50Q9ULJ7 1429 aa23.31■■□□□ 1.32
CNOT3-206ENST00000471126 SETD5Q9C0A6 1442 aa23.3■■□□□ 1.32
CNOT3-206ENST00000471126 KANK1Q14678 1352 aa23.29■■□□□ 1.32
CNOT3-206ENST00000471126 SLC52A1Q9NWF4 448 aa23.29■■□□□ 1.32
CNOT3-206ENST00000471126 CHD2O14647 1828 aaKnown RBP23.27■■□□□ 1.32
CNOT3-206ENST00000471126 LMTK2Q8IWU2 1503 aa23.27■■□□□ 1.32
CNOT3-206ENST00000471126 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.26■■□□□ 1.31
CNOT3-206ENST00000471126 ADAMTS2O95450 1211 aa23.26■■□□□ 1.31
CNOT3-206ENST00000471126 HDGFP51858 240 aaKnown RBP23.26■■□□□ 1.31
CNOT3-206ENST00000471126 ADGRB3O60242 1522 aa23.26■■□□□ 1.31
CNOT3-206ENST00000471126 UNC13BO14795 1591 aa23.26■■□□□ 1.31
CNOT3-206ENST00000471126 NOS1P29475 1434 aa23.25■■□□□ 1.31
CNOT3-206ENST00000471126 CCDC125Q86Z20 511 aa23.25■■□□□ 1.31
CNOT3-206ENST00000471126 ZFYVE9O95405 1425 aa23.25■■□□□ 1.31
CNOT3-206ENST00000471126 DDX17Q92841 729 aaKnown RBP23.23■■□□□ 1.31
CNOT3-206ENST00000471126 PNPLA6Q8IY17 1366 aa23.23■■□□□ 1.31
CNOT3-206ENST00000471126 RIMS2Q9UQ26 1411 aa23.23■■□□□ 1.31
CNOT3-206ENST00000471126 GCC2Q8IWJ2 1684 aa23.22■■□□□ 1.31
CNOT3-206ENST00000471126 USP21Q9UK80 565 aa23.22■■□□□ 1.31
CNOT3-206ENST00000471126 TRPC5Q9UL62 973 aaPredicted RBP23.21■■□□□ 1.31
CNOT3-206ENST00000471126 ASXL1Q8IXJ9 1541 aa23.2■■□□□ 1.3
CNOT3-206ENST00000471126 NAIPQ13075 1403 aa23.19■■□□□ 1.3
CNOT3-206ENST00000471126 AMOTL2Q9Y2J4 779 aa23.19■■□□□ 1.3
CNOT3-206ENST00000471126 HFM1A2PYH4 1435 aa23.18■■□□□ 1.3
CNOT3-206ENST00000471126 ITGAEP38570 1179 aa23.18■■□□□ 1.3
CNOT3-206ENST00000471126 ADAMTS13Q76LX8 1427 aa23.16■■□□□ 1.3
CNOT3-206ENST00000471126 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.16■■□□□ 1.3
CNOT3-206ENST00000471126 IQGAP3Q86VI3 1631 aa23.15■■□□□ 1.3
CNOT3-206ENST00000471126 PIK3R4Q99570 1358 aa23.14■■□□□ 1.3
CNOT3-206ENST00000471126 MST1RQ04912 1400 aa23.14■■□□□ 1.29
CNOT3-206ENST00000471126 FNBP4Q8N3X1 1017 aaPredicted RBP23.13■■□□□ 1.29
CNOT3-206ENST00000471126 DCCP43146 1447 aa23.13■■□□□ 1.29
CNOT3-206ENST00000471126 CHGAP10645 457 aaKnown RBP23.12■■□□□ 1.29
CNOT3-206ENST00000471126 PTPRUQ92729 1446 aa23.1■■□□□ 1.29
CNOT3-206ENST00000471126 EP400Q96L91 3159 aa23.1■■□□□ 1.29
CNOT3-206ENST00000471126 ATRNO75882 1429 aa23.09■■□□□ 1.29
CNOT3-206ENST00000471126 RPRD2Q5VT52 1461 aaKnown RBP23.09■■□□□ 1.29
CNOT3-206ENST00000471126 DEFB132Q7Z7B7 95 aa23.08■■□□□ 1.29
CNOT3-206ENST00000471126 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.28
CNOT3-206ENST00000471126 BLMP54132 1417 aaPredicted RBP23.03■■□□□ 1.28
CNOT3-206ENST00000471126 E9PCH4 1651 aa23.03■■□□□ 1.28
CNOT3-206ENST00000471126 NUP155O75694 1391 aa23.01■■□□□ 1.27
CNOT3-206ENST00000471126 TMEM131LA2VDJ0 1609 aa23.01■■□□□ 1.27
CNOT3-206ENST00000471126 GJD4Q96KN9 370 aaPredicted RBP23.01■■□□□ 1.27
CNOT3-206ENST00000471126 PTCH1Q13635 1447 aa23■■□□□ 1.27
CNOT3-206ENST00000471126 TRPM2O94759 1503 aa23■■□□□ 1.27
CNOT3-206ENST00000471126 MYO5BQ9ULV0 1848 aa22.99■■□□□ 1.27
CNOT3-206ENST00000471126 LRP5O75197 1615 aa22.99■■□□□ 1.27
CNOT3-206ENST00000471126 PSDA5PKW4 1024 aaPredicted RBP22.98■■□□□ 1.27
CNOT3-206ENST00000471126 SF3B2Q13435 895 aaKnown RBP22.98■■□□□ 1.27
CNOT3-206ENST00000471126 SOS2Q07890 1332 aaPredicted RBP22.98■■□□□ 1.27
CNOT3-206ENST00000471126 BCL9LQ86UU0 1499 aa22.97■■□□□ 1.27
CNOT3-206ENST00000471126 HRCP23327 699 aa22.95■■□□□ 1.26
CNOT3-206ENST00000471126 ORAI2Q96SN7 254 aa22.94■■□□□ 1.26
CNOT3-206ENST00000471126 C1orf167Q5SNV9 1468 aa22.93■■□□□ 1.26
CNOT3-206ENST00000471126 ADGRL3Q9HAR2 1447 aa22.92■■□□□ 1.26
CNOT3-206ENST00000471126 METP08581 1390 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms