RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 ZNF777Q9ULD5 760 aaPredicted RBP14.73□□□□□ -0.05
SRGAP3-204ENST00000470951 UHRF1BP1LA0JNW5 1464 aa14.72□□□□□ -0.05
SRGAP3-204ENST00000470951 VIRMAQ69YN4 1812 aaKnown RBP14.72□□□□□ -0.05
SRGAP3-204ENST00000470951 NPM1P06748 294 aaKnown RBP eCLIP14.72□□□□□ -0.05
SRGAP3-204ENST00000470951 ABCC10Q5T3U5 1492 aa14.71□□□□□ -0.05
SRGAP3-204ENST00000470951 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.71□□□□□ -0.05
SRGAP3-204ENST00000470951 FAM135AQ9P2D6 1515 aa14.71□□□□□ -0.05
SRGAP3-204ENST00000470951 BRPF3Q9ULD4 1205 aa14.71□□□□□ -0.05
SRGAP3-204ENST00000470951 ATP10BO94823 1461 aa14.7□□□□□ -0.06
SRGAP3-204ENST00000470951 TSPY4P0CV99 314 aa14.7□□□□□ -0.06
SRGAP3-204ENST00000470951 TSPY10P0CW01 314 aa14.7□□□□□ -0.06
SRGAP3-204ENST00000470951 FRAT1Q92837 279 aaPredicted RBP14.7□□□□□ -0.06
SRGAP3-204ENST00000470951 CCDC144AA2RUR9 1427 aa14.7□□□□□ -0.06
SRGAP3-204ENST00000470951 C8orf34Q49A92 452 aa14.69□□□□□ -0.06
SRGAP3-204ENST00000470951 ZCCHC11Q5TAX3 1644 aaKnown RBP14.69□□□□□ -0.06
SRGAP3-204ENST00000470951 EIF3AQ14152 1382 aaKnown RBP14.69□□□□□ -0.06
SRGAP3-204ENST00000470951 ERBINQ96RT1 1412 aa14.68□□□□□ -0.06
SRGAP3-204ENST00000470951 TESK2Q96S53 571 aa14.67□□□□□ -0.06
SRGAP3-204ENST00000470951 A0A0U1RQG5 324 aaPredicted RBP14.67□□□□□ -0.06
SRGAP3-204ENST00000470951 MYO5CQ9NQX4 1742 aa14.67□□□□□ -0.06
SRGAP3-204ENST00000470951 DISP3Q9P2K9 1392 aa14.66□□□□□ -0.06
SRGAP3-204ENST00000470951 DUSP27Q5VZP5 1158 aa14.66□□□□□ -0.06
SRGAP3-204ENST00000470951 CHMP4AQ9BY43 222 aa14.66□□□□□ -0.06
SRGAP3-204ENST00000470951 UNC13BO14795 1591 aa14.65□□□□□ -0.06
SRGAP3-204ENST00000470951 TMF1P82094 1093 aa14.65□□□□□ -0.06
SRGAP3-204ENST00000470951 CC2D1BQ5T0F9 858 aaKnown RBP14.65□□□□□ -0.06
SRGAP3-204ENST00000470951 C20orf194Q5TEA3 1177 aa14.65□□□□□ -0.06
SRGAP3-204ENST00000470951 FAM43AQ8N2R8 423 aa14.65□□□□□ -0.06
SRGAP3-204ENST00000470951 PPP6R1Q9UPN7 881 aa14.65□□□□□ -0.06
SRGAP3-204ENST00000470951 CCDC141Q6ZP82 1450 aa14.65□□□□□ -0.06
SRGAP3-204ENST00000470951 ZNF521Q96K83 1311 aa14.65□□□□□ -0.06
SRGAP3-204ENST00000470951 A2MP01023 1474 aa14.65□□□□□ -0.06
SRGAP3-204ENST00000470951 PANK3Q9H999 370 aa14.65□□□□□ -0.06
SRGAP3-204ENST00000470951 RNF17Q9BXT8 1623 aaKnown RBP14.64□□□□□ -0.07
SRGAP3-204ENST00000470951 PLEKHD1A6NEE1 506 aa14.64□□□□□ -0.07
SRGAP3-204ENST00000470951 RSPH4AQ5TD94 716 aa14.64□□□□□ -0.07
SRGAP3-204ENST00000470951 BCL11BQ9C0K0 894 aaPredicted RBP14.64□□□□□ -0.07
SRGAP3-204ENST00000470951 ASXL2Q76L83 1435 aa14.63□□□□□ -0.07
SRGAP3-204ENST00000470951 GOLGA2Q08379 1002 aa14.63□□□□□ -0.07
SRGAP3-204ENST00000470951 SKAP1Q86WV1 359 aa14.63□□□□□ -0.07
SRGAP3-204ENST00000470951 SLC4A3P48751 1232 aa14.63□□□□□ -0.07
SRGAP3-204ENST00000470951 ADAMTS8Q9UP79 889 aa14.63□□□□□ -0.07
SRGAP3-204ENST00000470951 NBPF1Q3BBV0 1214 aa14.62□□□□□ -0.07
SRGAP3-204ENST00000470951 WDR43Q15061 677 aaKnown RBP eCLIP14.61□□□□□ -0.07
SRGAP3-204ENST00000470951 PLEKHH1Q9ULM0 1364 aa14.61□□□□□ -0.07
SRGAP3-204ENST00000470951 MAST1Q9Y2H9 1570 aa14.61□□□□□ -0.07
SRGAP3-204ENST00000470951 ATP10AO60312 1499 aa14.61□□□□□ -0.07
SRGAP3-204ENST00000470951 RRP9O43818 475 aaKnown RBP14.6□□□□□ -0.07
SRGAP3-204ENST00000470951 FRAT2O75474 233 aaPredicted RBP14.6□□□□□ -0.07
SRGAP3-204ENST00000470951 TAF7LQ5H9L4 462 aa14.6□□□□□ -0.07
SRGAP3-204ENST00000470951 IQGAP3Q86VI3 1631 aa14.6□□□□□ -0.07
SRGAP3-204ENST00000470951 PIK3C2GO75747 1445 aa14.6□□□□□ -0.07
SRGAP3-204ENST00000470951 PLA2R1Q13018 1463 aa14.6□□□□□ -0.07
SRGAP3-204ENST00000470951 SYNMO15061 1565 aa14.59□□□□□ -0.07
SRGAP3-204ENST00000470951 TRMT2AQ8IZ69 625 aaKnown RBP14.59□□□□□ -0.07
SRGAP3-204ENST00000470951 NGEFQ8N5V2 710 aa14.59□□□□□ -0.07
SRGAP3-204ENST00000470951 WDR7Q9Y4E6 1490 aa14.59□□□□□ -0.07
SRGAP3-204ENST00000470951 NINLQ9Y2I6 1382 aa14.58□□□□□ -0.07
SRGAP3-204ENST00000470951 PREX2Q70Z35 1606 aa14.58□□□□□ -0.08
SRGAP3-204ENST00000470951 SLFN5Q08AF3 891 aa14.58□□□□□ -0.08
SRGAP3-204ENST00000470951 NPC1L1Q9UHC9 1359 aa14.58□□□□□ -0.08
SRGAP3-204ENST00000470951 PPP2R1AP30153 589 aa14.58□□□□□ -0.08
SRGAP3-204ENST00000470951 NKTRP30414 1462 aaKnown RBP14.57□□□□□ -0.08
SRGAP3-204ENST00000470951 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
SRGAP3-204ENST00000470951 SAMD9LQ8IVG5 1584 aa14.57□□□□□ -0.08
SRGAP3-204ENST00000470951 KNSTRNQ9Y448 316 aa14.57□□□□□ -0.08
SRGAP3-204ENST00000470951 IQGAP1P46940 1657 aa14.56□□□□□ -0.08
SRGAP3-204ENST00000470951 CDC42BPBQ9Y5S2 1711 aa14.56□□□□□ -0.08
SRGAP3-204ENST00000470951 BECN1Q14457 450 aa14.56□□□□□ -0.08
SRGAP3-204ENST00000470951 CDCA8Q53HL2 280 aa14.56□□□□□ -0.08
SRGAP3-204ENST00000470951 MAPK8IP3Q9UPT6 1336 aa14.56□□□□□ -0.08
SRGAP3-204ENST00000470951 ZMYM3Q14202 1370 aa14.55□□□□□ -0.08
SRGAP3-204ENST00000470951 MAGI2Q86UL8 1455 aa14.55□□□□□ -0.08
SRGAP3-204ENST00000470951 ASXL1Q8IXJ9 1541 aa14.55□□□□□ -0.08
SRGAP3-204ENST00000470951 PLXNC1O60486 1568 aa14.55□□□□□ -0.08
SRGAP3-204ENST00000470951 FAM69CQ0P6D2 419 aa14.55□□□□□ -0.08
SRGAP3-204ENST00000470951 RGS3P49796 1198 aa14.54□□□□□ -0.08
SRGAP3-204ENST00000470951 HNRNPMP52272 730 aaKnown RBP eCLIP14.54□□□□□ -0.08
SRGAP3-204ENST00000470951 CGNL1Q0VF96 1302 aa14.54□□□□□ -0.08
SRGAP3-204ENST00000470951 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
SRGAP3-204ENST00000470951 RGL3Q3MIN7 710 aa14.54□□□□□ -0.08
SRGAP3-204ENST00000470951 L1TD1Q5T7N2 865 aaKnown RBP14.54□□□□□ -0.08
SRGAP3-204ENST00000470951 PDE3AQ14432 1141 aa14.53□□□□□ -0.08
SRGAP3-204ENST00000470951 USP19O94966 1318 aa14.52□□□□□ -0.09
SRGAP3-204ENST00000470951 E9PSI1 815 aa14.52□□□□□ -0.09
SRGAP3-204ENST00000470951 IGSF3O75054 1194 aa14.52□□□□□ -0.09
SRGAP3-204ENST00000470951 CDK11BP21127 795 aaKnown RBP14.51□□□□□ -0.09
SRGAP3-204ENST00000470951 STAC3Q96MF2 364 aa14.51□□□□□ -0.09
SRGAP3-204ENST00000470951 DIP2BQ9P265 1576 aa14.51□□□□□ -0.09
SRGAP3-204ENST00000470951 HSP90AA2PQ14568 343 aaPredicted RBP14.5□□□□□ -0.09
SRGAP3-204ENST00000470951 MADDQ8WXG6 1647 aa14.5□□□□□ -0.09
SRGAP3-204ENST00000470951 KIF13AQ9H1H9 1805 aa14.5□□□□□ -0.09
SRGAP3-204ENST00000470951 MYOM1P52179 1685 aa14.49□□□□□ -0.09
SRGAP3-204ENST00000470951 NLRP1Q9C000 1473 aa14.48□□□□□ -0.09
SRGAP3-204ENST00000470951 SCAPERQ9BY12 1400 aa14.48□□□□□ -0.09
SRGAP3-204ENST00000470951 DUOX2Q9NRD8 1548 aa14.48□□□□□ -0.09
SRGAP3-204ENST00000470951 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.47□□□□□ -0.09
SRGAP3-204ENST00000470951 SPHKAPQ2M3C7 1700 aa14.47□□□□□ -0.09
SRGAP3-204ENST00000470951 TTC37Q6PGP7 1564 aa14.47□□□□□ -0.09
SRGAP3-204ENST00000470951 SYCP2Q9BX26 1530 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms