RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 LMOD3Q0VAK6 560 aa13.23□□□□□ -0.29
RRP1B-202ENST00000470886 A0A0U1RQG5 324 aaPredicted RBP13.22□□□□□ -0.29
RRP1B-202ENST00000470886 ZRSR1Q15695 479 aaKnown RBP13.22□□□□□ -0.29
RRP1B-202ENST00000470886 PKNOX2Q96KN3 472 aa13.22□□□□□ -0.29
RRP1B-202ENST00000470886 RSPH6AQ9H0K4 717 aa13.22□□□□□ -0.29
RRP1B-202ENST00000470886 PZPP20742 1482 aa13.21□□□□□ -0.29
RRP1B-202ENST00000470886 KIF3BO15066 747 aa13.21□□□□□ -0.29
RRP1B-202ENST00000470886 PNISRQ8TF01 805 aaKnown RBP13.21□□□□□ -0.29
RRP1B-202ENST00000470886 ARHGEF5Q12774 1597 aa13.21□□□□□ -0.29
RRP1B-202ENST00000470886 SKOR2Q2VWA4 1001 aaPredicted RBP13.2□□□□□ -0.3
RRP1B-202ENST00000470886 CCDC146Q8IYE0 955 aa13.2□□□□□ -0.3
RRP1B-202ENST00000470886 SYAP1Q96A49 352 aaPredicted RBP13.2□□□□□ -0.3
RRP1B-202ENST00000470886 ADCY10Q96PN6 1610 aa13.2□□□□□ -0.3
RRP1B-202ENST00000470886 ERBINQ96RT1 1412 aa13.2□□□□□ -0.3
RRP1B-202ENST00000470886 GOLGA6L6A8MZA4 724 aa13.19□□□□□ -0.3
RRP1B-202ENST00000470886 ZKSCAN2Q63HK3 967 aa13.19□□□□□ -0.3
RRP1B-202ENST00000470886 ATP10BO94823 1461 aa13.19□□□□□ -0.3
RRP1B-202ENST00000470886 DUOX2Q9NRD8 1548 aa13.19□□□□□ -0.3
RRP1B-202ENST00000470886 MFAP1P55081 439 aaKnown RBP13.19□□□□□ -0.3
RRP1B-202ENST00000470886 CHAF1AQ13111 956 aaPredicted RBP13.19□□□□□ -0.3
RRP1B-202ENST00000470886 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
RRP1B-202ENST00000470886 PLIN1O60240 522 aa13.18□□□□□ -0.3
RRP1B-202ENST00000470886 HMMRO75330 724 aa13.18□□□□□ -0.3
RRP1B-202ENST00000470886 INSRP06213 1382 aa13.18□□□□□ -0.3
RRP1B-202ENST00000470886 NRDCO43847 1150 aa13.17□□□□□ -0.3
RRP1B-202ENST00000470886 GGT6Q6P531 493 aa13.17□□□□□ -0.3
RRP1B-202ENST00000470886 SPRYD3Q8NCJ5 442 aa13.16□□□□□ -0.3
RRP1B-202ENST00000470886 RTF1Q92541 710 aaKnown RBP13.16□□□□□ -0.3
RRP1B-202ENST00000470886 NINLQ9Y2I6 1382 aa13.16□□□□□ -0.3
RRP1B-202ENST00000470886 DDX19BQ9UMR2 479 aa13.15□□□□□ -0.3
RRP1B-202ENST00000470886 EVC2Q86UK5 1308 aa13.15□□□□□ -0.3
RRP1B-202ENST00000470886 APAF1O14727 1248 aa13.15□□□□□ -0.3
RRP1B-202ENST00000470886 FAM135AQ9P2D6 1515 aa13.15□□□□□ -0.3
RRP1B-202ENST00000470886 KDM5DQ9BY66 1539 aa13.14□□□□□ -0.31
RRP1B-202ENST00000470886 C11orf95C9JLR9 678 aaPredicted RBP13.14□□□□□ -0.31
RRP1B-202ENST00000470886 OS9Q13438 667 aaPredicted RBP13.14□□□□□ -0.31
RRP1B-202ENST00000470886 RUNDC1Q96C34 613 aa13.14□□□□□ -0.31
RRP1B-202ENST00000470886 HDAC5Q9UQL6 1122 aa13.14□□□□□ -0.31
RRP1B-202ENST00000470886 CEP170Q5SW79 1584 aa13.13□□□□□ -0.31
RRP1B-202ENST00000470886 GOLGA6L4A6NEF3 574 aa13.13□□□□□ -0.31
RRP1B-202ENST00000470886 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
RRP1B-202ENST00000470886 C14orf37Q86TY3 774 aa13.13□□□□□ -0.31
RRP1B-202ENST00000470886 KIAA2012Q0VF49 1180 aa13.12□□□□□ -0.31
RRP1B-202ENST00000470886 CLUAP1Q96AJ1 413 aa13.12□□□□□ -0.31
RRP1B-202ENST00000470886 CHMP5Q9NZZ3 219 aa13.12□□□□□ -0.31
RRP1B-202ENST00000470886 ABCA8O94911 1581 aa13.12□□□□□ -0.31
RRP1B-202ENST00000470886 ST18O60284 1047 aa13.12□□□□□ -0.31
RRP1B-202ENST00000470886 SPATA31E1Q6ZUB1 1445 aa13.12□□□□□ -0.31
RRP1B-202ENST00000470886 KCNJ4P48050 445 aa13.12□□□□□ -0.31
RRP1B-202ENST00000470886 GZF1Q9H116 711 aaPredicted RBP13.12□□□□□ -0.31
RRP1B-202ENST00000470886 KIAA1211Q6ZU35 1233 aa13.11□□□□□ -0.31
RRP1B-202ENST00000470886 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
RRP1B-202ENST00000470886 COG6Q9Y2V7 657 aa13.11□□□□□ -0.31
RRP1B-202ENST00000470886 PRAG1Q86YV5 1406 aa13.11□□□□□ -0.31
RRP1B-202ENST00000470886 PDE3AQ14432 1141 aa13.11□□□□□ -0.31
RRP1B-202ENST00000470886 BACH2Q9BYV9 841 aa13.11□□□□□ -0.31
RRP1B-202ENST00000470886 STK26Q9P289 416 aa13.11□□□□□ -0.31
RRP1B-202ENST00000470886 SAFB2Q14151 953 aaKnown RBP eCLIP13.1□□□□□ -0.31
RRP1B-202ENST00000470886 PHF14O94880 888 aa13.1□□□□□ -0.31
RRP1B-202ENST00000470886 DZIP1LQ8IYY4 767 aaKnown RBP13.09□□□□□ -0.31
RRP1B-202ENST00000470886 ABCC10Q5T3U5 1492 aa13.09□□□□□ -0.31
RRP1B-202ENST00000470886 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
RRP1B-202ENST00000470886 NFKBIBQ15653 356 aa13.09□□□□□ -0.31
RRP1B-202ENST00000470886 CROCC2H7BZ55 1655 aa13.09□□□□□ -0.31
RRP1B-202ENST00000470886 STK31Q9BXU1 1019 aa13.09□□□□□ -0.31
RRP1B-202ENST00000470886 KIF16BQ96L93 1317 aa13.09□□□□□ -0.31
RRP1B-202ENST00000470886 LRRIQ1Q96JM4 1722 aa13.09□□□□□ -0.31
RRP1B-202ENST00000470886 CCDC184Q52MB2 194 aa13.09□□□□□ -0.31
RRP1B-202ENST00000470886 SENP3Q9H4L4 574 aaPredicted RBP13.09□□□□□ -0.31
RRP1B-202ENST00000470886 PLCB2Q00722 1185 aa13.08□□□□□ -0.32
RRP1B-202ENST00000470886 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
RRP1B-202ENST00000470886 DHX29Q7Z478 1369 aaKnown RBP13.08□□□□□ -0.32
RRP1B-202ENST00000470886 PLCH2O75038 1416 aa13.08□□□□□ -0.32
RRP1B-202ENST00000470886 MBD5Q9P267 1494 aa13.08□□□□□ -0.32
RRP1B-202ENST00000470886 KDM6BO15054 1643 aa13.07□□□□□ -0.32
RRP1B-202ENST00000470886 ADAMTS8Q9UP79 889 aa13.07□□□□□ -0.32
RRP1B-202ENST00000470886 RTEL1-TNFRSF6BF6WH68 1400 aa13.07□□□□□ -0.32
RRP1B-202ENST00000470886 FGD1P98174 961 aa13.07□□□□□ -0.32
RRP1B-202ENST00000470886 SCAF11Q99590 1463 aaKnown RBP13.07□□□□□ -0.32
RRP1B-202ENST00000470886 RPGRIP1LQ68CZ1 1315 aa13.06□□□□□ -0.32
RRP1B-202ENST00000470886 PPP2R1AP30153 589 aa13.06□□□□□ -0.32
RRP1B-202ENST00000470886 SYCP2Q9BX26 1530 aa13.06□□□□□ -0.32
RRP1B-202ENST00000470886 PARD3Q8TEW0 1356 aa13.06□□□□□ -0.32
RRP1B-202ENST00000470886 ABCC2Q92887 1545 aa13.06□□□□□ -0.32
RRP1B-202ENST00000470886 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
RRP1B-202ENST00000470886 KDM5CP41229 1560 aa13.06□□□□□ -0.32
RRP1B-202ENST00000470886 API5Q9BZZ5 524 aaKnown RBP13.05□□□□□ -0.32
RRP1B-202ENST00000470886 CT47B1P0C2W7 299 aaPredicted RBP13.05□□□□□ -0.32
RRP1B-202ENST00000470886 DNAJC5BQ9UF47 199 aa13.05□□□□□ -0.32
RRP1B-202ENST00000470886 RRP7AQ9Y3A4 280 aaKnown RBP13.05□□□□□ -0.32
RRP1B-202ENST00000470886 ZBTB7CA1YPR0 619 aa13.05□□□□□ -0.32
RRP1B-202ENST00000470886 GPRASP1Q5JY77 1395 aa13.04□□□□□ -0.32
RRP1B-202ENST00000470886 MAST1Q9Y2H9 1570 aa13.04□□□□□ -0.32
RRP1B-202ENST00000470886 ZMYM4Q5VZL5 1548 aa13.04□□□□□ -0.32
RRP1B-202ENST00000470886 POLR1AO95602 1720 aaPredicted RBP13.03□□□□□ -0.32
RRP1B-202ENST00000470886 GPATCH3Q96I76 525 aa13.03□□□□□ -0.32
RRP1B-202ENST00000470886 COL17A1Q9UMD9 1497 aaPredicted RBP13.03□□□□□ -0.32
RRP1B-202ENST00000470886 PLPPR3Q6T4P5 718 aa13.03□□□□□ -0.32
RRP1B-202ENST00000470886 NBPF1Q3BBV0 1214 aa13.03□□□□□ -0.32
RRP1B-202ENST00000470886 PREX2Q70Z35 1606 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms