RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 NLRP1Q9C000 1473 aa12.59□□□□□ -0.39
LMCD1-207ENST00000470776 HSPA5P11021 654 aaKnown RBP12.58□□□□□ -0.4
LMCD1-207ENST00000470776 CEBPAP49715 358 aaPredicted RBP12.58□□□□□ -0.4
LMCD1-207ENST00000470776 IFT172Q9UG01 1749 aa12.58□□□□□ -0.4
LMCD1-207ENST00000470776 TRPM1Q7Z4N2 1603 aa12.58□□□□□ -0.4
LMCD1-207ENST00000470776 RIMS1Q86UR5 1692 aaKnown RBP12.57□□□□□ -0.4
LMCD1-207ENST00000470776 NEXMIFQ5QGS0 1516 aa12.57□□□□□ -0.4
LMCD1-207ENST00000470776 FER1L4A9Z1Z3 1794 aa12.57□□□□□ -0.4
LMCD1-207ENST00000470776 NBPF1Q3BBV0 1214 aa12.57□□□□□ -0.4
LMCD1-207ENST00000470776 C14orf93Q9H972 538 aaKnown RBP12.57□□□□□ -0.4
LMCD1-207ENST00000470776 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
LMCD1-207ENST00000470776 CFAP65Q6ZU64 1925 aaKnown RBP12.56□□□□□ -0.4
LMCD1-207ENST00000470776 PIK3C2GO75747 1445 aa12.56□□□□□ -0.4
LMCD1-207ENST00000470776 LAMC1P11047 1609 aa12.56□□□□□ -0.4
LMCD1-207ENST00000470776 CARD11Q9BXL7 1154 aa12.56□□□□□ -0.4
LMCD1-207ENST00000470776 C3P01024 1663 aa12.56□□□□□ -0.4
LMCD1-207ENST00000470776 KDM5AP29375 1690 aaKnown RBP12.56□□□□□ -0.4
LMCD1-207ENST00000470776 KIAA1210Q9ULL0 1709 aa12.55□□□□□ -0.4
LMCD1-207ENST00000470776 PPLO60437 1756 aa12.55□□□□□ -0.4
LMCD1-207ENST00000470776 USP47Q96K76 1375 aa12.55□□□□□ -0.4
LMCD1-207ENST00000470776 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
LMCD1-207ENST00000470776 HDGFP51858 240 aaKnown RBP12.53□□□□□ -0.4
LMCD1-207ENST00000470776 CFAP70Q5T0N1 1121 aa12.53□□□□□ -0.4
LMCD1-207ENST00000470776 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.53□□□□□ -0.4
LMCD1-207ENST00000470776 FBXO41Q8TF61 875 aa12.52□□□□□ -0.41
LMCD1-207ENST00000470776 TMEM2Q9UHN6 1383 aa12.52□□□□□ -0.41
LMCD1-207ENST00000470776 RIMS2Q9UQ26 1411 aa12.52□□□□□ -0.41
LMCD1-207ENST00000470776 SETBP1Q9Y6X0 1596 aa12.52□□□□□ -0.41
LMCD1-207ENST00000470776 HIRIP3Q9BW71 556 aaPredicted RBP12.51□□□□□ -0.41
LMCD1-207ENST00000470776 SCAF11Q99590 1463 aaKnown RBP12.5□□□□□ -0.41
LMCD1-207ENST00000470776 ARHGAP23Q9P227 1491 aa12.5□□□□□ -0.41
LMCD1-207ENST00000470776 UBR1Q8IWV7 1749 aa12.49□□□□□ -0.41
LMCD1-207ENST00000470776 ADGRB1O14514 1584 aa12.49□□□□□ -0.41
LMCD1-207ENST00000470776 SLIT1O75093 1534 aa12.49□□□□□ -0.41
LMCD1-207ENST00000470776 ST20-MTHFSA0A0A6YYL1 179 aa12.49□□□□□ -0.41
LMCD1-207ENST00000470776 DIEXFQ68CQ4 756 aaKnown RBP12.48□□□□□ -0.41
LMCD1-207ENST00000470776 THEMISQ8N1K5 641 aaPredicted RBP12.48□□□□□ -0.41
LMCD1-207ENST00000470776 MYO5BQ9ULV0 1848 aa12.47□□□□□ -0.41
LMCD1-207ENST00000470776 C11orf95C9JLR9 678 aaPredicted RBP12.47□□□□□ -0.41
LMCD1-207ENST00000470776 TESK2Q96S53 571 aa12.47□□□□□ -0.41
LMCD1-207ENST00000470776 WASHC2AQ641Q2 1341 aa12.46□□□□□ -0.41
LMCD1-207ENST00000470776 NUTM2DQ5VT03 806 aaPredicted RBP12.46□□□□□ -0.41
LMCD1-207ENST00000470776 LMTK3Q96Q04 1460 aa12.46□□□□□ -0.42
LMCD1-207ENST00000470776 CCDC7Q96M83 1385 aa12.45□□□□□ -0.42
LMCD1-207ENST00000470776 IQGAP1P46940 1657 aa12.45□□□□□ -0.42
LMCD1-207ENST00000470776 MYO3AQ8NEV4 1616 aa12.45□□□□□ -0.42
LMCD1-207ENST00000470776 SLC24A1O60721 1099 aa12.45□□□□□ -0.42
LMCD1-207ENST00000470776 PLEKHG1Q9ULL1 1385 aa12.44□□□□□ -0.42
LMCD1-207ENST00000470776 ALKQ9UM73 1620 aa12.44□□□□□ -0.42
LMCD1-207ENST00000470776 CEP170BQ9Y4F5 1589 aaPredicted RBP12.44□□□□□ -0.42
LMCD1-207ENST00000470776 CENPBP07199 599 aaPredicted RBP12.44□□□□□ -0.42
LMCD1-207ENST00000470776 LTKP29376 864 aa12.44□□□□□ -0.42
LMCD1-207ENST00000470776 EIF3AQ14152 1382 aaKnown RBP12.43□□□□□ -0.42
LMCD1-207ENST00000470776 SBNO2Q9Y2G9 1366 aa12.43□□□□□ -0.42
LMCD1-207ENST00000470776 KIF7Q2M1P5 1343 aa12.43□□□□□ -0.42
LMCD1-207ENST00000470776 HSPA2P54652 639 aa12.43□□□□□ -0.42
LMCD1-207ENST00000470776 TMEM132EQ6IEE7 984 aa12.43□□□□□ -0.42
LMCD1-207ENST00000470776 TXNDC2Q86VQ3 553 aa12.43□□□□□ -0.42
LMCD1-207ENST00000470776 EID1Q9Y6B2 187 aa12.43□□□□□ -0.42
LMCD1-207ENST00000470776 ASXL1Q8IXJ9 1541 aa12.42□□□□□ -0.42
LMCD1-207ENST00000470776 MED14O60244 1454 aa12.42□□□□□ -0.42
LMCD1-207ENST00000470776 ZNF142P52746 1687 aaPredicted RBP12.42□□□□□ -0.42
LMCD1-207ENST00000470776 SETD1BQ9UPS6 1966 aaKnown RBP12.41□□□□□ -0.42
LMCD1-207ENST00000470776 DDX10Q13206 875 aaKnown RBP12.41□□□□□ -0.42
LMCD1-207ENST00000470776 ADAMTS13Q76LX8 1427 aa12.41□□□□□ -0.42
LMCD1-207ENST00000470776 SIRT1Q96EB6 747 aa12.41□□□□□ -0.42
LMCD1-207ENST00000470776 ABCC11Q96J66 1382 aa12.41□□□□□ -0.42
LMCD1-207ENST00000470776 NRXN3Q9Y4C0 1643 aa12.4□□□□□ -0.42
LMCD1-207ENST00000470776 YTHDC2Q9H6S0 1430 aaKnown RBP12.4□□□□□ -0.42
LMCD1-207ENST00000470776 TMF1P82094 1093 aa12.4□□□□□ -0.42
LMCD1-207ENST00000470776 PELP1Q8IZL8 1130 aaKnown RBP12.4□□□□□ -0.42
LMCD1-207ENST00000470776 TBX22Q9Y458 520 aa12.4□□□□□ -0.42
LMCD1-207ENST00000470776 LRPPRCP42704 1394 aaKnown RBP12.4□□□□□ -0.42
LMCD1-207ENST00000470776 TRAK1Q9UPV9 953 aa12.39□□□□□ -0.43
LMCD1-207ENST00000470776 SETD1AO15047 1707 aaKnown RBP12.39□□□□□ -0.43
LMCD1-207ENST00000470776 CENPJQ9HC77 1338 aaPredicted RBP12.38□□□□□ -0.43
LMCD1-207ENST00000470776 DLC1Q96QB1 1528 aa12.38□□□□□ -0.43
LMCD1-207ENST00000470776 PUS7Q96PZ0 661 aaKnown RBP12.38□□□□□ -0.43
LMCD1-207ENST00000470776 METP08581 1390 aa12.38□□□□□ -0.43
LMCD1-207ENST00000470776 TECPR2O15040 1411 aa12.37□□□□□ -0.43
LMCD1-207ENST00000470776 CDCA8Q53HL2 280 aa12.37□□□□□ -0.43
LMCD1-207ENST00000470776 ANKLE2Q86XL3 938 aa12.37□□□□□ -0.43
LMCD1-207ENST00000470776 POLR1AO95602 1720 aaPredicted RBP12.37□□□□□ -0.43
LMCD1-207ENST00000470776 DISP3Q9P2K9 1392 aa12.36□□□□□ -0.43
LMCD1-207ENST00000470776 PIK3R4Q99570 1358 aa12.35□□□□□ -0.43
LMCD1-207ENST00000470776 FAM135BQ49AJ0 1406 aa12.35□□□□□ -0.43
LMCD1-207ENST00000470776 DIP2AQ14689 1571 aa12.35□□□□□ -0.43
LMCD1-207ENST00000470776 SOCS7O14512 581 aa12.34□□□□□ -0.43
LMCD1-207ENST00000470776 STK26Q9P289 416 aa12.33□□□□□ -0.44
LMCD1-207ENST00000470776 ARHGEF28Q8N1W1 1705 aaKnown RBP12.32□□□□□ -0.44
LMCD1-207ENST00000470776 PTPRUQ92729 1446 aa12.31□□□□□ -0.44
LMCD1-207ENST00000470776 MIER1Q8N108 512 aa12.31□□□□□ -0.44
LMCD1-207ENST00000470776 BCANQ96GW7 911 aa12.31□□□□□ -0.44
LMCD1-207ENST00000470776 PRAM1Q96QH2 718 aa12.31□□□□□ -0.44
LMCD1-207ENST00000470776 SLC26A8Q96RN1 970 aa12.31□□□□□ -0.44
LMCD1-207ENST00000470776 KNDC1Q76NI1 1749 aa12.3□□□□□ -0.44
LMCD1-207ENST00000470776 CPS1P31327 1500 aa12.3□□□□□ -0.44
LMCD1-207ENST00000470776 EVC2Q86UK5 1308 aa12.3□□□□□ -0.44
LMCD1-207ENST00000470776 NPHP4O75161 1426 aaPredicted RBP12.29□□□□□ -0.44
LMCD1-207ENST00000470776 STRCQ7RTU9 1775 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms