RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 PRR20CP86479 221 aa7.06□□□□□ -1.28
UBXN4-206ENST00000470687 PRR20DP86480 221 aa7.06□□□□□ -1.28
UBXN4-206ENST00000470687 PRR20BP86481 221 aa7.06□□□□□ -1.28
UBXN4-206ENST00000470687 PRR20AP86496 221 aa7.06□□□□□ -1.28
UBXN4-206ENST00000470687 SPRYD7Q5W111 196 aa7.06□□□□□ -1.28
UBXN4-206ENST00000470687 BLOC1S3Q6QNY0 202 aa7.06□□□□□ -1.28
UBXN4-206ENST00000470687 TLL1O43897 1013 aa7.05□□□□□ -1.28
UBXN4-206ENST00000470687 ZNF598Q86UK7 904 aaKnown RBP7.05□□□□□ -1.28
UBXN4-206ENST00000470687 POTECB2RU33 542 aa7.04□□□□□ -1.28
UBXN4-206ENST00000470687 ANKLE1Q8NAG6 615 aa7.04□□□□□ -1.28
UBXN4-206ENST00000470687 ZNF697Q5TEC3 545 aa7.02□□□□□ -1.29
UBXN4-206ENST00000470687 LIAT1Q6ZQX7 453 aa7.02□□□□□ -1.29
UBXN4-206ENST00000470687 SPRYD3Q8NCJ5 442 aa7.02□□□□□ -1.29
UBXN4-206ENST00000470687 WDR70Q9NW82 654 aa7.02□□□□□ -1.29
UBXN4-206ENST00000470687 FAM187AA6NFU0 413 aa7.01□□□□□ -1.29
UBXN4-206ENST00000470687 PPEF1O14829 653 aaPredicted RBP7.01□□□□□ -1.29
UBXN4-206ENST00000470687 S1PR4O95977 384 aa7.01□□□□□ -1.29
UBXN4-206ENST00000470687 GDF9O60383 454 aa7□□□□□ -1.29
UBXN4-206ENST00000470687 DNAJB2P25686 324 aa7□□□□□ -1.29
UBXN4-206ENST00000470687 TNFRSF10AO00220 468 aa6.99□□□□□ -1.29
UBXN4-206ENST00000470687 ACTN4O43707 911 aaKnown RBP6.99□□□□□ -1.29
UBXN4-206ENST00000470687 TMEM134Q9H6X4 195 aa6.99□□□□□ -1.29
UBXN4-206ENST00000470687 ADH1BP00325 375 aa6.98□□□□□ -1.29
UBXN4-206ENST00000470687 KMT5BQ4FZB7 885 aa6.98□□□□□ -1.29
UBXN4-206ENST00000470687 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
UBXN4-206ENST00000470687 ST8SIA5O15466 376 aa6.97□□□□□ -1.29
UBXN4-206ENST00000470687 CFHP08603 1231 aa6.97□□□□□ -1.29
UBXN4-206ENST00000470687 PLA2G2CQ5R387 149 aa6.97□□□□□ -1.29
UBXN4-206ENST00000470687 PLCB2Q00722 1185 aa6.96□□□□□ -1.3
UBXN4-206ENST00000470687 TREML4Q6UXN2 200 aa6.96□□□□□ -1.3
UBXN4-206ENST00000470687 RBM46Q8TBY0 533 aaKnown RBP6.96□□□□□ -1.3
UBXN4-206ENST00000470687 AAASQ9NRG9 546 aa6.96□□□□□ -1.3
UBXN4-206ENST00000470687 ADGRG1Q9Y653 693 aa6.96□□□□□ -1.3
UBXN4-206ENST00000470687 PTGDRQ13258 359 aa6.95□□□□□ -1.3
UBXN4-206ENST00000470687 RCCD1A6NED2 376 aa6.94□□□□□ -1.3
UBXN4-206ENST00000470687 NR1I2O75469 434 aa6.94□□□□□ -1.3
UBXN4-206ENST00000470687 MLLT3P42568 568 aaPredicted RBP6.94□□□□□ -1.3
UBXN4-206ENST00000470687 SLC6A16Q9GZN6 736 aa6.94□□□□□ -1.3
UBXN4-206ENST00000470687 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.94□□□□□ -1.3
UBXN4-206ENST00000470687 SLC10A3P09131 477 aa6.93□□□□□ -1.3
UBXN4-206ENST00000470687 PKD2L1Q9P0L9 805 aa6.93□□□□□ -1.3
UBXN4-206ENST00000470687 KDM2AQ9Y2K7 1162 aa6.93□□□□□ -1.3
UBXN4-206ENST00000470687 FAM161AQ3B820 660 aa6.91□□□□□ -1.3
UBXN4-206ENST00000470687 LMOD2Q6P5Q4 547 aa6.91□□□□□ -1.3
UBXN4-206ENST00000470687 CRIPAKQ8N1N5 446 aa6.91□□□□□ -1.3
UBXN4-206ENST00000470687 FOXC1Q12948 553 aa6.9□□□□□ -1.3
UBXN4-206ENST00000470687 PAXIP1Q6ZW49 1069 aaPredicted RBP6.9□□□□□ -1.3
UBXN4-206ENST00000470687 CFAP44Q96MT7 982 aa6.9□□□□□ -1.3
UBXN4-206ENST00000470687 SCUBE3Q8IX30 993 aa6.89□□□□□ -1.31
UBXN4-206ENST00000470687 TSHZ2Q9NRE2 1034 aa6.89□□□□□ -1.31
UBXN4-206ENST00000470687 DACH1Q9UI36 760 aa6.89□□□□□ -1.31
UBXN4-206ENST00000470687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.88□□□□□ -1.31
UBXN4-206ENST00000470687 AVPP01185 164 aa6.88□□□□□ -1.31
UBXN4-206ENST00000470687 SLC24A1O60721 1099 aa6.87□□□□□ -1.31
UBXN4-206ENST00000470687 PUS10Q3MIT2 529 aaKnown RBP6.87□□□□□ -1.31
UBXN4-206ENST00000470687 ARHGEF1Q92888 912 aaKnown RBP6.87□□□□□ -1.31
UBXN4-206ENST00000470687 SPSB2Q99619 263 aa6.87□□□□□ -1.31
UBXN4-206ENST00000470687 TOR4AQ9NXH8 423 aa6.87□□□□□ -1.31
UBXN4-206ENST00000470687 WFS1O76024 890 aa6.86□□□□□ -1.31
UBXN4-206ENST00000470687 RPIAP49247 311 aa6.86□□□□□ -1.31
UBXN4-206ENST00000470687 GMPR2Q9P2T1 348 aaKnown RBP6.86□□□□□ -1.31
UBXN4-206ENST00000470687 NUTM2FA1L443 756 aa6.85□□□□□ -1.31
UBXN4-206ENST00000470687 PXYLP1Q8TE99 480 aa6.85□□□□□ -1.31
UBXN4-206ENST00000470687 AXIN1O15169 862 aa6.84□□□□□ -1.31
UBXN4-206ENST00000470687 CTC1Q2NKJ3 1217 aa6.84□□□□□ -1.31
UBXN4-206ENST00000470687 KCNV2Q8TDN2 545 aa6.84□□□□□ -1.31
UBXN4-206ENST00000470687 FCF1Q9Y324 198 aaKnown RBP6.84□□□□□ -1.31
UBXN4-206ENST00000470687 C11orf95C9JLR9 678 aaPredicted RBP6.83□□□□□ -1.32
UBXN4-206ENST00000470687 FCHSD2O94868 740 aa6.83□□□□□ -1.32
UBXN4-206ENST00000470687 SMCPP49901 116 aaPredicted RBP6.83□□□□□ -1.32
UBXN4-206ENST00000470687 NFX1Q12986 1120 aaKnown RBP6.83□□□□□ -1.32
UBXN4-206ENST00000470687 CYP4X1Q8N118 509 aa6.83□□□□□ -1.32
UBXN4-206ENST00000470687 THAP11Q96EK4 314 aa6.82□□□□□ -1.32
UBXN4-206ENST00000470687 STK17AQ9UEE5 414 aa6.82□□□□□ -1.32
UBXN4-206ENST00000470687 WIPF1O43516 503 aa6.81□□□□□ -1.32
UBXN4-206ENST00000470687 CD2BP2O95400 341 aaKnown RBP6.81□□□□□ -1.32
UBXN4-206ENST00000470687 OATP04181 439 aa6.81□□□□□ -1.32
UBXN4-206ENST00000470687 MORN1Q5T089 497 aa6.81□□□□□ -1.32
UBXN4-206ENST00000470687 RSPH4AQ5TD94 716 aa6.81□□□□□ -1.32
UBXN4-206ENST00000470687 METTL3Q86U44 580 aaKnown RBP6.8□□□□□ -1.32
UBXN4-206ENST00000470687 FAM160A2Q8N612 972 aaPredicted RBP6.8□□□□□ -1.32
UBXN4-206ENST00000470687 PRDM9Q9NQV7 894 aa6.79□□□□□ -1.32
UBXN4-206ENST00000470687 FMNL1O95466 1100 aaPredicted RBP6.78□□□□□ -1.32
UBXN4-206ENST00000470687 INSM1Q01101 510 aaPredicted RBP6.78□□□□□ -1.32
UBXN4-206ENST00000470687 FUT2Q10981 343 aa6.78□□□□□ -1.32
UBXN4-206ENST00000470687 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
UBXN4-206ENST00000470687 TTC24A2A3L6 582 aaPredicted RBP6.77□□□□□ -1.33
UBXN4-206ENST00000470687 RDH13Q8NBN7 331 aa6.77□□□□□ -1.33
UBXN4-206ENST00000470687 SLC27A5Q9Y2P5 690 aa6.77□□□□□ -1.33
UBXN4-206ENST00000470687 SMPD1P17405 629 aa6.76□□□□□ -1.33
UBXN4-206ENST00000470687 ATP6V1AP38606 617 aa6.76□□□□□ -1.33
UBXN4-206ENST00000470687 HIC1Q14526 733 aa6.76□□□□□ -1.33
UBXN4-206ENST00000470687 ATP13A2Q9NQ11 1180 aa6.76□□□□□ -1.33
UBXN4-206ENST00000470687 DAXXQ9UER7 740 aaPredicted RBP6.76□□□□□ -1.33
UBXN4-206ENST00000470687 SALL2Q9Y467 1007 aaPredicted RBP6.76□□□□□ -1.33
UBXN4-206ENST00000470687 WNT7AO00755 349 aa6.75□□□□□ -1.33
UBXN4-206ENST00000470687 SNRPBP14678 240 aaKnown RBP6.75□□□□□ -1.33
UBXN4-206ENST00000470687 DDX11L8A8MPP1 907 aa6.74□□□□□ -1.33
UBXN4-206ENST00000470687 ZBTB24O43167 697 aaPredicted RBP6.74□□□□□ -1.33
UBXN4-206ENST00000470687 HAP1P54257 671 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms