RNA–Protein interactions for RNA: ENST00000470238.1

SCYL3-205, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-205ENST00000470238 IQGAP1P46940 1657 aa20.51■□□□□ 0.87
SCYL3-205ENST00000470238 PPLO60437 1756 aa20.5■□□□□ 0.87
SCYL3-205ENST00000470238 CLTCQ00610 1675 aaKnown RBP20.5■□□□□ 0.87
SCYL3-205ENST00000470238 SCAF11Q99590 1463 aaKnown RBP20.49■□□□□ 0.87
SCYL3-205ENST00000470238 ADGRF5Q8IZF2 1346 aa20.48■□□□□ 0.87
SCYL3-205ENST00000470238 ERVK-7P63135 1459 aa20.48■□□□□ 0.87
SCYL3-205ENST00000470238 POLR3GLQ9BT43 218 aa20.48■□□□□ 0.87
SCYL3-205ENST00000470238 IDI1Q13907 227 aa20.46■□□□□ 0.87
SCYL3-205ENST00000470238 EIF3AQ14152 1382 aaKnown RBP20.45■□□□□ 0.86
SCYL3-205ENST00000470238 TRHP20396 242 aaPredicted RBP20.45■□□□□ 0.86
SCYL3-205ENST00000470238 MLECQ14165 292 aa20.45■□□□□ 0.86
SCYL3-205ENST00000470238 TESK2Q96S53 571 aa20.44■□□□□ 0.86
SCYL3-205ENST00000470238 PIK3C2GO75747 1445 aa20.44■□□□□ 0.86
SCYL3-205ENST00000470238 ESF1Q9H501 851 aaKnown RBP20.43■□□□□ 0.86
SCYL3-205ENST00000470238 SETBP1Q9Y6X0 1596 aa20.43■□□□□ 0.86
SCYL3-205ENST00000470238 CFAP70Q5T0N1 1121 aa20.43■□□□□ 0.86
SCYL3-205ENST00000470238 NEXMIFQ5QGS0 1516 aa20.42■□□□□ 0.86
SCYL3-205ENST00000470238 SPATA31D1Q6ZQQ2 1576 aa20.42■□□□□ 0.86
SCYL3-205ENST00000470238 TMF1P82094 1093 aa20.42■□□□□ 0.86
SCYL3-205ENST00000470238 FBXO31Q5XUX0 539 aaPredicted RBP20.42■□□□□ 0.86
SCYL3-205ENST00000470238 TMEM131LA2VDJ0 1609 aa20.41■□□□□ 0.86
SCYL3-205ENST00000470238 VGFO15240 615 aaPredicted RBP20.41■□□□□ 0.86
SCYL3-205ENST00000470238 ZFYVE9O95405 1425 aa20.39■□□□□ 0.85
SCYL3-205ENST00000470238 PRKRIP1Q9H875 184 aaPredicted RBP20.39■□□□□ 0.85
SCYL3-205ENST00000470238 DISP3Q9P2K9 1392 aa20.39■□□□□ 0.85
SCYL3-205ENST00000470238 C14orf93Q9H972 538 aaKnown RBP20.38■□□□□ 0.85
SCYL3-205ENST00000470238 SLC24A1O60721 1099 aa20.37■□□□□ 0.85
SCYL3-205ENST00000470238 DNAJC5Q9H3Z4 198 aa20.37■□□□□ 0.85
SCYL3-205ENST00000470238 ZMYM3Q14202 1370 aa20.36■□□□□ 0.85
SCYL3-205ENST00000470238 MYO5BQ9ULV0 1848 aa20.35■□□□□ 0.85
SCYL3-205ENST00000470238 CDCA8Q53HL2 280 aa20.35■□□□□ 0.85
SCYL3-205ENST00000470238 STAG3Q9UJ98 1225 aa20.33■□□□□ 0.85
SCYL3-205ENST00000470238 ADGRB1O14514 1584 aa20.32■□□□□ 0.84
SCYL3-205ENST00000470238 MYO3AQ8NEV4 1616 aa20.32■□□□□ 0.84
SCYL3-205ENST00000470238 NUTM2DQ5VT03 806 aaPredicted RBP20.29■□□□□ 0.84
SCYL3-205ENST00000470238 A2ML1A8K2U0 1454 aa20.29■□□□□ 0.84
SCYL3-205ENST00000470238 KTN1Q86UP2 1357 aaKnown RBP20.28■□□□□ 0.84
SCYL3-205ENST00000470238 SBNO2Q9Y2G9 1366 aa20.28■□□□□ 0.84
SCYL3-205ENST00000470238 TNRQ92752 1358 aa20.27■□□□□ 0.83
SCYL3-205ENST00000470238 CENPJQ9HC77 1338 aaPredicted RBP20.26■□□□□ 0.83
SCYL3-205ENST00000470238 KDM5AP29375 1690 aaKnown RBP20.25■□□□□ 0.83
SCYL3-205ENST00000470238 TMEM132EQ6IEE7 984 aa20.24■□□□□ 0.83
SCYL3-205ENST00000470238 TRAK1Q9UPV9 953 aa20.23■□□□□ 0.83
SCYL3-205ENST00000470238 RIMS2Q9UQ26 1411 aa20.23■□□□□ 0.83
SCYL3-205ENST00000470238 RALBP1Q15311 655 aa20.22■□□□□ 0.83
SCYL3-205ENST00000470238 MRS2Q9HD23 443 aa20.22■□□□□ 0.83
SCYL3-205ENST00000470238 PANK3Q9H999 370 aa20.22■□□□□ 0.83
SCYL3-205ENST00000470238 QRICH2Q9H0J4 1663 aa20.21■□□□□ 0.83
SCYL3-205ENST00000470238 PER1O15534 1290 aaPredicted RBP20.21■□□□□ 0.83
SCYL3-205ENST00000470238 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.2■□□□□ 0.82
SCYL3-205ENST00000470238 ARHGEF28Q8N1W1 1705 aaKnown RBP20.2■□□□□ 0.82
SCYL3-205ENST00000470238 ASXL1Q8IXJ9 1541 aa20.19■□□□□ 0.82
SCYL3-205ENST00000470238 FER1L4A9Z1Z3 1794 aa20.19■□□□□ 0.82
SCYL3-205ENST00000470238 ALKQ9UM73 1620 aa20.18■□□□□ 0.82
SCYL3-205ENST00000470238 CCDC184Q52MB2 194 aa20.18■□□□□ 0.82
SCYL3-205ENST00000470238 NLRP1Q9C000 1473 aa20.18■□□□□ 0.82
SCYL3-205ENST00000470238 HDGFP51858 240 aaKnown RBP20.17■□□□□ 0.82
SCYL3-205ENST00000470238 CNGB1Q14028 1251 aaPredicted RBP20.17■□□□□ 0.82
SCYL3-205ENST00000470238 MYOM1P52179 1685 aa20.17■□□□□ 0.82
SCYL3-205ENST00000470238 PARD3Q8TEW0 1356 aa20.16■□□□□ 0.82
SCYL3-205ENST00000470238 C3P01024 1663 aa20.16■□□□□ 0.82
SCYL3-205ENST00000470238 MYBBP1AQ9BQG0 1328 aaKnown RBP20.15■□□□□ 0.82
SCYL3-205ENST00000470238 UBR1Q8IWV7 1749 aa20.15■□□□□ 0.82
SCYL3-205ENST00000470238 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
SCYL3-205ENST00000470238 YTHDC2Q9H6S0 1430 aaKnown RBP20.14■□□□□ 0.81
SCYL3-205ENST00000470238 KNSTRNQ9Y448 316 aa20.12■□□□□ 0.81
SCYL3-205ENST00000470238 BRD4O60885 1362 aaPredicted RBP20.12■□□□□ 0.81
SCYL3-205ENST00000470238 TMEM2Q9UHN6 1383 aa20.11■□□□□ 0.81
SCYL3-205ENST00000470238 PUS7Q96PZ0 661 aaKnown RBP20.11■□□□□ 0.81
SCYL3-205ENST00000470238 STK26Q9P289 416 aa20.11■□□□□ 0.81
SCYL3-205ENST00000470238 CEBPAP49715 358 aaPredicted RBP20.1■□□□□ 0.81
SCYL3-205ENST00000470238 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
SCYL3-205ENST00000470238 TMC1Q8TDI8 760 aa20.1■□□□□ 0.81
SCYL3-205ENST00000470238 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
SCYL3-205ENST00000470238 PTPRMP28827 1452 aa20.1■□□□□ 0.81
SCYL3-205ENST00000470238 EVC2Q86UK5 1308 aa20.1■□□□□ 0.81
SCYL3-205ENST00000470238 HNRNPUQ00839 825 aaKnown RBP eCLIP20.09■□□□□ 0.81
SCYL3-205ENST00000470238 GTF3C3Q9Y5Q9 886 aa20.09■□□□□ 0.81
SCYL3-205ENST00000470238 SETD1AO15047 1707 aaKnown RBP20.09■□□□□ 0.81
SCYL3-205ENST00000470238 CC2D1BQ5T0F9 858 aaKnown RBP20.08■□□□□ 0.81
SCYL3-205ENST00000470238 NLRP13Q86W25 1043 aa20.08■□□□□ 0.81
SCYL3-205ENST00000470238 NRXN3Q9Y4C0 1643 aa20.07■□□□□ 0.8
SCYL3-205ENST00000470238 NPC1L1Q9UHC9 1359 aa20.07■□□□□ 0.8
SCYL3-205ENST00000470238 DLC1Q96QB1 1528 aa20.07■□□□□ 0.8
SCYL3-205ENST00000470238 TULP4Q9NRJ4 1543 aa20.07■□□□□ 0.8
SCYL3-205ENST00000470238 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
SCYL3-205ENST00000470238 POGKQ9P215 609 aa20.06■□□□□ 0.8
SCYL3-205ENST00000470238 AMER1Q5JTC6 1135 aaPredicted RBP20.05■□□□□ 0.8
SCYL3-205ENST00000470238 PRAM1Q96QH2 718 aa20.05■□□□□ 0.8
SCYL3-205ENST00000470238 ABCC11Q96J66 1382 aa20.03■□□□□ 0.8
SCYL3-205ENST00000470238 PNISRQ8TF01 805 aaKnown RBP20.02■□□□□ 0.8
SCYL3-205ENST00000470238 SAFB2Q14151 953 aaKnown RBP eCLIP20.02■□□□□ 0.79
SCYL3-205ENST00000470238 SLIT1O75093 1534 aa20.01■□□□□ 0.79
SCYL3-205ENST00000470238 PLEKHG1Q9ULL1 1385 aa20.01■□□□□ 0.79
SCYL3-205ENST00000470238 RIMS1Q86UR5 1692 aaKnown RBP20■□□□□ 0.79
SCYL3-205ENST00000470238 NINLQ9Y2I6 1382 aa20■□□□□ 0.79
SCYL3-205ENST00000470238 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
SCYL3-205ENST00000470238 BCANQ96GW7 911 aa20■□□□□ 0.79
SCYL3-205ENST00000470238 EID1Q9Y6B2 187 aa20■□□□□ 0.79
SCYL3-205ENST00000470238 ARHGAP23Q9P227 1491 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms