RNA–Protein interactions for RNA: ENST00000470150.5

CHRD-212, Transcript of chordin, human

TSL 2

Gene CHRD, Length 4,234 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRD-212	ENST00000470150	NOP58	Q9Y2X3	529 aa	Known RBP	18.61	■□□□□ 0.57
CHRD-212	ENST00000470150	XPC	Q01831	940 aa	Predicted RBP	18.61	■□□□□ 0.57
CHRD-212	ENST00000470150	COG3	Q96JB2	828 aa		18.61	■□□□□ 0.57
CHRD-212	ENST00000470150	GGNBP2	Q9H3C7	697 aa		18.6	■□□□□ 0.57
CHRD-212	ENST00000470150	SLC12A5	Q9H2X9	1139 aa		18.6	■□□□□ 0.57
CHRD-212	ENST00000470150	RPGRIP1L	Q68CZ1	1315 aa		18.59	■□□□□ 0.57
CHRD-212	ENST00000470150	ZMYM3	Q14202	1370 aa		18.59	■□□□□ 0.57
CHRD-212	ENST00000470150	CFAP43	Q8NDM7	1665 aa		18.59	■□□□□ 0.57
CHRD-212	ENST00000470150	KIF7	Q2M1P5	1343 aa		18.58	■□□□□ 0.57
CHRD-212	ENST00000470150	AMOTL2	Q9Y2J4	779 aa		18.57	■□□□□ 0.56
CHRD-212	ENST00000470150	CDK19	Q9BWU1	502 aa		18.57	■□□□□ 0.56
CHRD-212	ENST00000470150	DUOX2	Q9NRD8	1548 aa		18.57	■□□□□ 0.56
CHRD-212	ENST00000470150	CCDC184	Q52MB2	194 aa		18.57	■□□□□ 0.56
CHRD-212	ENST00000470150	CGNL1	Q0VF96	1302 aa		18.56	■□□□□ 0.56
CHRD-212	ENST00000470150	NLRP6	P59044	892 aa		18.56	■□□□□ 0.56
CHRD-212	ENST00000470150	CABP1	Q9NZU7	370 aa		18.56	■□□□□ 0.56
CHRD-212	ENST00000470150	CCDC146	Q8IYE0	955 aa		18.55	■□□□□ 0.56
CHRD-212	ENST00000470150	ZCCHC11	Q5TAX3	1644 aa	Known RBP	18.55	■□□□□ 0.56
CHRD-212	ENST00000470150	CLASP1	Q7Z460	1538 aa		18.54	■□□□□ 0.56
CHRD-212	ENST00000470150	TCOF1	Q13428	1488 aa	Known RBP	18.54	■□□□□ 0.56
CHRD-212	ENST00000470150	NOS1	P29475	1434 aa		18.54	■□□□□ 0.56
CHRD-212	ENST00000470150	RALBP1	Q15311	655 aa		18.54	■□□□□ 0.56
CHRD-212	ENST00000470150	RTN4	Q9NQC3	1192 aa	Known RBP	18.54	■□□□□ 0.56
CHRD-212	ENST00000470150	ATP10A	O60312	1499 aa		18.53	■□□□□ 0.56
CHRD-212	ENST00000470150	NEO1	Q92859	1461 aa		18.53	■□□□□ 0.56
CHRD-212	ENST00000470150	FANCI	Q9NVI1	1328 aa		18.52	■□□□□ 0.56
CHRD-212	ENST00000470150	EVA1C	P58658	441 aa		18.52	■□□□□ 0.56
CHRD-212	ENST00000470150	ABTB2	Q8N961	1025 aa		18.52	■□□□□ 0.55
CHRD-212	ENST00000470150	RTEL1-TNFRSF6B	F6WH68	1400 aa		18.51	■□□□□ 0.55
CHRD-212	ENST00000470150	RTF1	Q92541	710 aa	Known RBP	18.51	■□□□□ 0.55
CHRD-212	ENST00000470150	WASHC2A	Q641Q2	1341 aa		18.51	■□□□□ 0.55
CHRD-212	ENST00000470150	TTC37	Q6PGP7	1564 aa		18.5	■□□□□ 0.55
CHRD-212	ENST00000470150	ATP7A	Q04656	1500 aa		18.5	■□□□□ 0.55
CHRD-212	ENST00000470150	NLRP13	Q86W25	1043 aa		18.5	■□□□□ 0.55
CHRD-212	ENST00000470150	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.5	■□□□□ 0.55
CHRD-212	ENST00000470150	USP35	Q9P2H5	1018 aa		18.49	■□□□□ 0.55
CHRD-212	ENST00000470150	NCKAP5L	Q9HCH0	1330 aa		18.49	■□□□□ 0.55
CHRD-212	ENST00000470150	RRP7A	Q9Y3A4	280 aa	Known RBP	18.48	■□□□□ 0.55
CHRD-212	ENST00000470150	RIMBP3C	A6NJZ7	1639 aa		18.48	■□□□□ 0.55
CHRD-212	ENST00000470150	RIMBP3B	A6NNM3	1639 aa		18.48	■□□□□ 0.55
CHRD-212	ENST00000470150	RIMBP3	Q9UFD9	1639 aa		18.48	■□□□□ 0.55
CHRD-212	ENST00000470150	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.47	■□□□□ 0.55
CHRD-212	ENST00000470150	NUTM2E	B1AL46	878 aa	Predicted RBP	18.47	■□□□□ 0.55
CHRD-212	ENST00000470150	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.47	■□□□□ 0.55
CHRD-212	ENST00000470150	PNN	Q9H307	717 aa	Known RBP	18.47	■□□□□ 0.55
CHRD-212	ENST00000470150	CCDC7	Q96M83	1385 aa		18.47	■□□□□ 0.55
CHRD-212	ENST00000470150	MEX3C	Q5U5Q3	659 aa	Known RBP	18.47	■□□□□ 0.55
CHRD-212	ENST00000470150	FRAT1	Q92837	279 aa	Predicted RBP	18.47	■□□□□ 0.55
CHRD-212	ENST00000470150	MBD5	Q9P267	1494 aa		18.46	■□□□□ 0.55
CHRD-212	ENST00000470150	FOXO3	O43524	673 aa		18.46	■□□□□ 0.55
CHRD-212	ENST00000470150	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.46	■□□□□ 0.55
CHRD-212	ENST00000470150	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.45	■□□□□ 0.54
CHRD-212	ENST00000470150	MAPKBP1	O60336	1514 aa		18.45	■□□□□ 0.54
CHRD-212	ENST00000470150	FAM135A	Q9P2D6	1515 aa		18.45	■□□□□ 0.54
CHRD-212	ENST00000470150	CFAP65	Q6ZU64	1925 aa	Known RBP	18.44	■□□□□ 0.54
CHRD-212	ENST00000470150	GPRASP1	Q5JY77	1395 aa		18.44	■□□□□ 0.54
CHRD-212	ENST00000470150	ERICH6B	Q5W0A0	696 aa		18.44	■□□□□ 0.54
CHRD-212	ENST00000470150	NUDT16	Q96DE0	195 aa	Known RBP	18.43	■□□□□ 0.54
CHRD-212	ENST00000470150	ADCY10	Q96PN6	1610 aa		18.42	■□□□□ 0.54
CHRD-212	ENST00000470150	SHANK2	Q9UPX8	1470 aa		18.42	■□□□□ 0.54
CHRD-212	ENST00000470150	CCDC61	Q9Y6R9	512 aa		18.41	■□□□□ 0.54
CHRD-212	ENST00000470150	C14orf93	Q9H972	538 aa	Known RBP	18.41	■□□□□ 0.54
CHRD-212	ENST00000470150	ZFYVE16	Q7Z3T8	1539 aa		18.4	■□□□□ 0.54
CHRD-212	ENST00000470150	DNMT1	P26358	1616 aa	Known RBP	18.4	■□□□□ 0.54
CHRD-212	ENST00000470150	MYO5C	Q9NQX4	1742 aa		18.4	■□□□□ 0.54
CHRD-212	ENST00000470150	NLRP2	Q9NX02	1062 aa		18.39	■□□□□ 0.54
CHRD-212	ENST00000470150	RPRD2	Q5VT52	1461 aa	Known RBP	18.39	■□□□□ 0.53
CHRD-212	ENST00000470150	HMOX1	P09601	288 aa		18.38	■□□□□ 0.53
CHRD-212	ENST00000470150	DMRT2	Q9Y5R5	561 aa		18.38	■□□□□ 0.53
CHRD-212	ENST00000470150	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18.38	■□□□□ 0.53
CHRD-212	ENST00000470150	ARHGEF12	Q9NZN5	1544 aa		18.38	■□□□□ 0.53
CHRD-212	ENST00000470150	STRN4	Q9NRL3	753 aa		18.38	■□□□□ 0.53
CHRD-212	ENST00000470150	SAMD9L	Q8IVG5	1584 aa		18.38	■□□□□ 0.53
CHRD-212	ENST00000470150	NPHP1	O15259	732 aa		18.38	■□□□□ 0.53
CHRD-212	ENST00000470150	RIMS2	Q9UQ26	1411 aa		18.37	■□□□□ 0.53
CHRD-212	ENST00000470150	C11orf95	C9JLR9	678 aa	Predicted RBP	18.37	■□□□□ 0.53
CHRD-212	ENST00000470150	MTHFS	P49914	203 aa		18.37	■□□□□ 0.53
CHRD-212	ENST00000470150	ZC3H6	P61129	1189 aa	Known RBP	18.36	■□□□□ 0.53
CHRD-212	ENST00000470150	ZBED9	Q6R2W3	1325 aa		18.36	■□□□□ 0.53
CHRD-212	ENST00000470150	DIAPH1	O60610	1272 aa	Known RBP	18.35	■□□□□ 0.53
CHRD-212	ENST00000470150	EIF5B	O60841	1220 aa	Known RBP	18.35	■□□□□ 0.53
CHRD-212	ENST00000470150	FTSJ3	Q8IY81	847 aa	Known RBP	18.35	■□□□□ 0.53
CHRD-212	ENST00000470150	KCNA6	P17658	529 aa		18.34	■□□□□ 0.53
CHRD-212	ENST00000470150	SYTL4	Q96C24	671 aa	Predicted RBP	18.34	■□□□□ 0.53
CHRD-212	ENST00000470150	IPO9	Q96P70	1041 aa	Known RBP	18.33	■□□□□ 0.52
CHRD-212	ENST00000470150	ELL2	O00472	640 aa	Predicted RBP	18.33	■□□□□ 0.52
CHRD-212	ENST00000470150	WASL	O00401	505 aa	Predicted RBP	18.32	■□□□□ 0.52
CHRD-212	ENST00000470150	PZP	P20742	1482 aa		18.31	■□□□□ 0.52
CHRD-212	ENST00000470150	RRS1	Q15050	365 aa	Known RBP	18.31	■□□□□ 0.52
CHRD-212	ENST00000470150	PHF8	Q9UPP1	1060 aa		18.31	■□□□□ 0.52
CHRD-212	ENST00000470150	ADGRL2	O95490	1459 aa		18.31	■□□□□ 0.52
CHRD-212	ENST00000470150	ABCC1	P33527	1531 aa		18.3	■□□□□ 0.52
CHRD-212	ENST00000470150	APAF1	O14727	1248 aa		18.3	■□□□□ 0.52
CHRD-212	ENST00000470150	ZNF692	Q9BU19	519 aa	Predicted RBP	18.3	■□□□□ 0.52
CHRD-212	ENST00000470150	PRDM11	Q9NQV5	511 aa		18.3	■□□□□ 0.52
CHRD-212	ENST00000470150	CNTLN	Q9NXG0	1405 aa		18.3	■□□□□ 0.52
CHRD-212	ENST00000470150	LTK	P29376	864 aa		18.3	■□□□□ 0.52
CHRD-212	ENST00000470150	UBAP1L	F5GYI3	381 aa		18.3	■□□□□ 0.52
CHRD-212	ENST00000470150	NPAT	Q14207	1427 aa		18.29	■□□□□ 0.52
CHRD-212	ENST00000470150	UHRF1BP1	Q6BDS2	1440 aa		18.29	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms