RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 AHDC1Q5TGY3 1603 aaPredicted RBP13.62□□□□□ -0.23
LSM2-210ENST00000470086 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
LSM2-210ENST00000470086 CEP162Q5TB80 1403 aa13.61□□□□□ -0.23
LSM2-210ENST00000470086 SETBP1Q9Y6X0 1596 aa13.61□□□□□ -0.23
LSM2-210ENST00000470086 MTUS2Q5JR59 1369 aa13.6□□□□□ -0.23
LSM2-210ENST00000470086 RGS12O14924 1447 aa13.59□□□□□ -0.23
LSM2-210ENST00000470086 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
LSM2-210ENST00000470086 TRIM52Q96A61 297 aa13.59□□□□□ -0.23
LSM2-210ENST00000470086 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
LSM2-210ENST00000470086 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
LSM2-210ENST00000470086 NHSL1Q5SYE7 1610 aa13.58□□□□□ -0.24
LSM2-210ENST00000470086 JCADQ9P266 1359 aa13.58□□□□□ -0.24
LSM2-210ENST00000470086 APLP2Q06481 763 aa13.56□□□□□ -0.24
LSM2-210ENST00000470086 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
LSM2-210ENST00000470086 TMEM2Q9UHN6 1383 aa13.54□□□□□ -0.24
LSM2-210ENST00000470086 CDK12Q9NYV4 1490 aaPredicted RBP13.54□□□□□ -0.24
LSM2-210ENST00000470086 TXNDC2Q86VQ3 553 aa13.53□□□□□ -0.24
LSM2-210ENST00000470086 ARHGAP31Q2M1Z3 1444 aa13.51□□□□□ -0.25
LSM2-210ENST00000470086 DUOX2Q9NRD8 1548 aa13.5□□□□□ -0.25
LSM2-210ENST00000470086 FGD6Q6ZV73 1430 aa13.5□□□□□ -0.25
LSM2-210ENST00000470086 SLC26A8Q96RN1 970 aa13.5□□□□□ -0.25
LSM2-210ENST00000470086 TMEM131LA2VDJ0 1609 aa13.48□□□□□ -0.25
LSM2-210ENST00000470086 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
LSM2-210ENST00000470086 MSH6P52701 1360 aa13.47□□□□□ -0.25
LSM2-210ENST00000470086 CAPN15O75808 1086 aa13.47□□□□□ -0.25
LSM2-210ENST00000470086 XRN1Q8IZH2 1706 aaKnown RBP13.47□□□□□ -0.25
LSM2-210ENST00000470086 ZFYVE9O95405 1425 aa13.47□□□□□ -0.25
LSM2-210ENST00000470086 LMTK2Q8IWU2 1503 aa13.46□□□□□ -0.25
LSM2-210ENST00000470086 ASXL1Q8IXJ9 1541 aa13.46□□□□□ -0.25
LSM2-210ENST00000470086 KCNA6P17658 529 aa13.46□□□□□ -0.25
LSM2-210ENST00000470086 PROSER2Q86WR7 435 aaPredicted RBP13.46□□□□□ -0.25
LSM2-210ENST00000470086 NRXN3Q9Y4C0 1643 aa13.46□□□□□ -0.26
LSM2-210ENST00000470086 BRWD3Q6RI45 1802 aa13.43□□□□□ -0.26
LSM2-210ENST00000470086 SPATA31A6Q5VVP1 1343 aa13.43□□□□□ -0.26
LSM2-210ENST00000470086 NOS1P29475 1434 aa13.43□□□□□ -0.26
LSM2-210ENST00000470086 SLAIN2Q9P270 581 aa13.43□□□□□ -0.26
LSM2-210ENST00000470086 MARF1Q9Y4F3 1742 aaKnown RBP13.43□□□□□ -0.26
LSM2-210ENST00000470086 LRP5O75197 1615 aa13.42□□□□□ -0.26
LSM2-210ENST00000470086 AFF2P51816 1311 aa13.42□□□□□ -0.26
LSM2-210ENST00000470086 UNC13BO14795 1591 aa13.41□□□□□ -0.26
LSM2-210ENST00000470086 ERBINQ96RT1 1412 aa13.41□□□□□ -0.26
LSM2-210ENST00000470086 MEX3CQ5U5Q3 659 aaKnown RBP13.41□□□□□ -0.26
LSM2-210ENST00000470086 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
LSM2-210ENST00000470086 ADAMTS13Q76LX8 1427 aa13.4□□□□□ -0.26
LSM2-210ENST00000470086 RXRBP28702 533 aa13.4□□□□□ -0.26
LSM2-210ENST00000470086 ZNF219Q9P2Y4 722 aaPredicted RBP13.4□□□□□ -0.26
LSM2-210ENST00000470086 LAMC1P11047 1609 aa13.39□□□□□ -0.27
LSM2-210ENST00000470086 EID1Q9Y6B2 187 aa13.39□□□□□ -0.27
LSM2-210ENST00000470086 PTPN23Q9H3S7 1636 aa13.39□□□□□ -0.27
LSM2-210ENST00000470086 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
LSM2-210ENST00000470086 E9PCH4 1651 aa13.38□□□□□ -0.27
LSM2-210ENST00000470086 KIF15Q9NS87 1388 aa13.38□□□□□ -0.27
LSM2-210ENST00000470086 IDI1Q13907 227 aa13.38□□□□□ -0.27
LSM2-210ENST00000470086 TRPM2O94759 1503 aa13.38□□□□□ -0.27
LSM2-210ENST00000470086 NUTM2BA6NNL0 878 aaPredicted RBP13.37□□□□□ -0.27
LSM2-210ENST00000470086 NUTM2EB1AL46 878 aaPredicted RBP13.37□□□□□ -0.27
LSM2-210ENST00000470086 NUTM2AQ8IVF1 878 aaPredicted RBP13.37□□□□□ -0.27
LSM2-210ENST00000470086 PLEKHG1Q9ULL1 1385 aa13.36□□□□□ -0.27
LSM2-210ENST00000470086 DSG3P32926 999 aa13.36□□□□□ -0.27
LSM2-210ENST00000470086 MST1RQ04912 1400 aa13.36□□□□□ -0.27
LSM2-210ENST00000470086 SETD5Q9C0A6 1442 aa13.36□□□□□ -0.27
LSM2-210ENST00000470086 BRINP3Q76B58 766 aa13.35□□□□□ -0.27
LSM2-210ENST00000470086 ABCC5O15440 1437 aa13.35□□□□□ -0.27
LSM2-210ENST00000470086 RIMS2Q9UQ26 1411 aa13.35□□□□□ -0.27
LSM2-210ENST00000470086 COL22A1Q8NFW1 1626 aaPredicted RBP13.35□□□□□ -0.27
LSM2-210ENST00000470086 PNPLA6Q8IY17 1366 aa13.34□□□□□ -0.27
LSM2-210ENST00000470086 MYOM3Q5VTT5 1437 aa13.33□□□□□ -0.28
LSM2-210ENST00000470086 DDX17Q92841 729 aaKnown RBP13.33□□□□□ -0.28
LSM2-210ENST00000470086 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.33□□□□□ -0.28
LSM2-210ENST00000470086 TSPY4P0CV99 314 aa13.32□□□□□ -0.28
LSM2-210ENST00000470086 TSPY10P0CW01 314 aa13.32□□□□□ -0.28
LSM2-210ENST00000470086 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
LSM2-210ENST00000470086 RSPH4AQ5TD94 716 aa13.31□□□□□ -0.28
LSM2-210ENST00000470086 DAPK1P53355 1430 aa13.3□□□□□ -0.28
LSM2-210ENST00000470086 NCOA3Q9Y6Q9 1424 aa13.3□□□□□ -0.28
LSM2-210ENST00000470086 GLI3P10071 1580 aa13.3□□□□□ -0.28
LSM2-210ENST00000470086 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
LSM2-210ENST00000470086 C8orf37Q96NL8 207 aa13.3□□□□□ -0.28
LSM2-210ENST00000470086 IQGAP3Q86VI3 1631 aa13.29□□□□□ -0.28
LSM2-210ENST00000470086 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
LSM2-210ENST00000470086 ATAD2Q6PL18 1390 aa13.29□□□□□ -0.28
LSM2-210ENST00000470086 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
LSM2-210ENST00000470086 ATRNO75882 1429 aa13.28□□□□□ -0.28
LSM2-210ENST00000470086 DCCP43146 1447 aa13.28□□□□□ -0.28
LSM2-210ENST00000470086 SPHKAPQ2M3C7 1700 aa13.27□□□□□ -0.28
LSM2-210ENST00000470086 RBM6P78332 1123 aaKnown RBP13.27□□□□□ -0.29
LSM2-210ENST00000470086 QTRT2Q9H974 415 aaKnown RBP13.26□□□□□ -0.29
LSM2-210ENST00000470086 RRP7BPQ9NSQ0 103 aa13.26□□□□□ -0.29
LSM2-210ENST00000470086 ABCA3Q99758 1704 aa13.25□□□□□ -0.29
LSM2-210ENST00000470086 RPRD2Q5VT52 1461 aaKnown RBP13.25□□□□□ -0.29
LSM2-210ENST00000470086 KANK4Q5T7N3 995 aaPredicted RBP13.25□□□□□ -0.29
LSM2-210ENST00000470086 BCL9LQ86UU0 1499 aa13.24□□□□□ -0.29
LSM2-210ENST00000470086 PLCH1Q4KWH8 1693 aa13.24□□□□□ -0.29
LSM2-210ENST00000470086 BCANQ96GW7 911 aa13.23□□□□□ -0.29
LSM2-210ENST00000470086 C14orf37Q86TY3 774 aa13.22□□□□□ -0.29
LSM2-210ENST00000470086 CADPS2Q86UW7 1296 aa13.22□□□□□ -0.29
LSM2-210ENST00000470086 MYOM2P54296 1465 aa13.22□□□□□ -0.29
LSM2-210ENST00000470086 TNS1Q9HBL0 1735 aaKnown RBP13.22□□□□□ -0.29
LSM2-210ENST00000470086 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
LSM2-210ENST00000470086 KANK1Q14678 1352 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms