RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 ZNF687Q8N1G0 1237 aa7.94□□□□□ -1.14
ITGA6-208ENST00000469534 PREX2Q70Z35 1606 aa7.93□□□□□ -1.14
ITGA6-208ENST00000469534 RRBP1Q9P2E9 1410 aaKnown RBP7.93□□□□□ -1.14
ITGA6-208ENST00000469534 GPATCH8Q9UKJ3 1502 aaKnown RBP7.93□□□□□ -1.14
ITGA6-208ENST00000469534 ARSIQ5FYB1 569 aa7.92□□□□□ -1.14
ITGA6-208ENST00000469534 CFDP1Q9UEE9 299 aaPredicted RBP7.92□□□□□ -1.14
ITGA6-208ENST00000469534 ARHGAP5Q13017 1502 aa7.92□□□□□ -1.14
ITGA6-208ENST00000469534 CHGAP10645 457 aaKnown RBP7.91□□□□□ -1.14
ITGA6-208ENST00000469534 CHIC2Q9UKJ5 165 aa7.91□□□□□ -1.14
ITGA6-208ENST00000469534 MYT1LQ9UL68 1186 aa7.91□□□□□ -1.14
ITGA6-208ENST00000469534 CAMSAP2Q08AD1 1489 aa7.91□□□□□ -1.14
ITGA6-208ENST00000469534 KIF13AQ9H1H9 1805 aa7.9□□□□□ -1.14
ITGA6-208ENST00000469534 SAMD9LQ8IVG5 1584 aa7.9□□□□□ -1.14
ITGA6-208ENST00000469534 SLC34A2O95436 690 aa7.9□□□□□ -1.14
ITGA6-208ENST00000469534 NKX1-1Q15270 411 aaPredicted RBP7.9□□□□□ -1.14
ITGA6-208ENST00000469534 ABCA9Q8IUA7 1624 aa7.89□□□□□ -1.15
ITGA6-208ENST00000469534 PTGER2P43116 358 aa7.89□□□□□ -1.15
ITGA6-208ENST00000469534 KHSRPQ92945 711 aaKnown RBP eCLIP7.89□□□□□ -1.15
ITGA6-208ENST00000469534 MAPKBP1O60336 1514 aa7.88□□□□□ -1.15
ITGA6-208ENST00000469534 PTPRKQ15262 1439 aa7.88□□□□□ -1.15
ITGA6-208ENST00000469534 HNRNPMP52272 730 aaKnown RBP eCLIP7.88□□□□□ -1.15
ITGA6-208ENST00000469534 FAM69CQ0P6D2 419 aa7.88□□□□□ -1.15
ITGA6-208ENST00000469534 TMC2Q8TDI7 906 aa7.88□□□□□ -1.15
ITGA6-208ENST00000469534 DIP2BQ9P265 1576 aa7.88□□□□□ -1.15
ITGA6-208ENST00000469534 SYCP2Q9BX26 1530 aa7.88□□□□□ -1.15
ITGA6-208ENST00000469534 TCOF1Q13428 1488 aaKnown RBP7.87□□□□□ -1.15
ITGA6-208ENST00000469534 CROCC2H7BZ55 1655 aa7.87□□□□□ -1.15
ITGA6-208ENST00000469534 ZNF316A6NFI3 1004 aaPredicted RBP7.87□□□□□ -1.15
ITGA6-208ENST00000469534 MIA2Q96PC5 1412 aa7.86□□□□□ -1.15
ITGA6-208ENST00000469534 DNMT1P26358 1616 aaKnown RBP7.86□□□□□ -1.15
ITGA6-208ENST00000469534 MAP3K4Q9Y6R4 1608 aa7.86□□□□□ -1.15
ITGA6-208ENST00000469534 RRP7BPQ9NSQ0 103 aa7.86□□□□□ -1.15
ITGA6-208ENST00000469534 PLCH2O75038 1416 aa7.86□□□□□ -1.15
ITGA6-208ENST00000469534 CD109Q6YHK3 1445 aa7.86□□□□□ -1.15
ITGA6-208ENST00000469534 ARHGEF12Q9NZN5 1544 aa7.85□□□□□ -1.15
ITGA6-208ENST00000469534 PPRC1Q5VV67 1664 aaKnown RBP7.85□□□□□ -1.15
ITGA6-208ENST00000469534 ADGBQ8N7X0 1667 aa7.85□□□□□ -1.15
ITGA6-208ENST00000469534 ABCC5O15440 1437 aa7.85□□□□□ -1.15
ITGA6-208ENST00000469534 DAPK1P53355 1430 aa7.85□□□□□ -1.15
ITGA6-208ENST00000469534 FANCAO15360 1455 aa7.84□□□□□ -1.15
ITGA6-208ENST00000469534 FOXK1P85037 733 aa7.84□□□□□ -1.15
ITGA6-208ENST00000469534 EFCAB2Q5VUJ9 269 aa7.84□□□□□ -1.15
ITGA6-208ENST00000469534 GPHNQ9NQX3 736 aaPredicted RBP7.84□□□□□ -1.15
ITGA6-208ENST00000469534 PCDHGA4Q9Y5G9 962 aa7.84□□□□□ -1.15
ITGA6-208ENST00000469534 KDM6BO15054 1643 aa7.84□□□□□ -1.15
ITGA6-208ENST00000469534 ABCC1P33527 1531 aa7.83□□□□□ -1.16
ITGA6-208ENST00000469534 ANKRD13DQ6ZTN6 518 aa7.83□□□□□ -1.16
ITGA6-208ENST00000469534 TRAPPC8Q9Y2L5 1435 aa7.83□□□□□ -1.16
ITGA6-208ENST00000469534 KDM4FA0A1W2PPD8 638 aa7.82□□□□□ -1.16
ITGA6-208ENST00000469534 NUDT7P0C024 238 aa7.82□□□□□ -1.16
ITGA6-208ENST00000469534 GLI2P10070 1586 aa7.82□□□□□ -1.16
ITGA6-208ENST00000469534 GCC2Q8IWJ2 1684 aa7.82□□□□□ -1.16
ITGA6-208ENST00000469534 ADGRL1O94910 1474 aa7.81□□□□□ -1.16
ITGA6-208ENST00000469534 CFAP74Q9C0B2 1584 aa7.81□□□□□ -1.16
ITGA6-208ENST00000469534 AKNAQ7Z591 1439 aa7.81□□□□□ -1.16
ITGA6-208ENST00000469534 SCAPERQ9BY12 1400 aa7.81□□□□□ -1.16
ITGA6-208ENST00000469534 LSM11P83369 360 aaKnown RBP eCLIP7.81□□□□□ -1.16
ITGA6-208ENST00000469534 PTCD2Q8WV60 388 aaKnown RBP7.81□□□□□ -1.16
ITGA6-208ENST00000469534 RYDENQ9NUL5 291 aaKnown RBP7.81□□□□□ -1.16
ITGA6-208ENST00000469534 CCDC141Q6ZP82 1450 aa7.81□□□□□ -1.16
ITGA6-208ENST00000469534 MBD5Q9P267 1494 aa7.81□□□□□ -1.16
ITGA6-208ENST00000469534 ARHGEF5Q12774 1597 aa7.8□□□□□ -1.16
ITGA6-208ENST00000469534 C9orf84Q5VXU9 1444 aa7.8□□□□□ -1.16
ITGA6-208ENST00000469534 PBX2P40425 430 aa7.8□□□□□ -1.16
ITGA6-208ENST00000469534 PLPP6Q8IY26 295 aa7.8□□□□□ -1.16
ITGA6-208ENST00000469534 AFAP1Q8N556 730 aa7.8□□□□□ -1.16
ITGA6-208ENST00000469534 RAB3GAP2Q9H2M9 1393 aa7.8□□□□□ -1.16
ITGA6-208ENST00000469534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.8□□□□□ -1.16
ITGA6-208ENST00000469534 SETD5Q9C0A6 1442 aa7.79□□□□□ -1.16
ITGA6-208ENST00000469534 ARAP3Q8WWN8 1544 aa7.79□□□□□ -1.16
ITGA6-208ENST00000469534 GTPBP6O43824 516 aaPredicted RBP7.79□□□□□ -1.16
ITGA6-208ENST00000469534 RAPGEF3O95398 923 aa7.79□□□□□ -1.16
ITGA6-208ENST00000469534 DSG2Q14126 1118 aa7.79□□□□□ -1.16
ITGA6-208ENST00000469534 LHX6Q9UPM6 363 aa7.79□□□□□ -1.16
ITGA6-208ENST00000469534 TSPY4P0CV99 314 aa7.78□□□□□ -1.16
ITGA6-208ENST00000469534 TSPY10P0CW01 314 aa7.78□□□□□ -1.16
ITGA6-208ENST00000469534 CCER1Q8TC90 406 aaPredicted RBP7.78□□□□□ -1.16
ITGA6-208ENST00000469534 PLEKHH2Q8IVE3 1493 aa7.78□□□□□ -1.16
ITGA6-208ENST00000469534 RICTORQ6R327 1708 aa7.78□□□□□ -1.16
ITGA6-208ENST00000469534 NAIPQ13075 1403 aa7.78□□□□□ -1.16
ITGA6-208ENST00000469534 POTEEQ6S8J3 1075 aa7.77□□□□□ -1.17
ITGA6-208ENST00000469534 TRIM52Q96A61 297 aa7.77□□□□□ -1.17
ITGA6-208ENST00000469534 CRISPLD2Q9H0B8 497 aa7.77□□□□□ -1.17
ITGA6-208ENST00000469534 SPAG9O60271 1321 aaKnown RBP7.77□□□□□ -1.17
ITGA6-208ENST00000469534 KIDINS220Q9ULH0 1771 aa7.76□□□□□ -1.17
ITGA6-208ENST00000469534 FRMPD1Q5SYB0 1578 aa7.76□□□□□ -1.17
ITGA6-208ENST00000469534 ATP7AQ04656 1500 aa7.76□□□□□ -1.17
ITGA6-208ENST00000469534 ZFYVE16Q7Z3T8 1539 aa7.76□□□□□ -1.17
ITGA6-208ENST00000469534 HFM1A2PYH4 1435 aa7.76□□□□□ -1.17
ITGA6-208ENST00000469534 KIAA1107Q9UPP5 1409 aa7.76□□□□□ -1.17
ITGA6-208ENST00000469534 INO80Q9ULG1 1556 aaPredicted RBP7.76□□□□□ -1.17
ITGA6-208ENST00000469534 MAST1Q9Y2H9 1570 aa7.76□□□□□ -1.17
ITGA6-208ENST00000469534 DENND4BO75064 1496 aaPredicted RBP7.75□□□□□ -1.17
ITGA6-208ENST00000469534 NEO1Q92859 1461 aa7.75□□□□□ -1.17
ITGA6-208ENST00000469534 SHANK2Q9UPX8 1470 aa7.75□□□□□ -1.17
ITGA6-208ENST00000469534 ANKRD30AQ9BXX3 1397 aa7.75□□□□□ -1.17
ITGA6-208ENST00000469534 KIF15Q9NS87 1388 aa7.75□□□□□ -1.17
ITGA6-208ENST00000469534 NCOA1Q15788 1441 aa7.75□□□□□ -1.17
ITGA6-208ENST00000469534 POGZQ7Z3K3 1410 aa7.75□□□□□ -1.17
ITGA6-208ENST00000469534 ADGRL2O95490 1459 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms