RNA–Protein interactions for RNA: ENST00000469491.5

FNDC3B-207, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 2

Gene FNDC3B, Length 2,916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-207ENST00000469491 PANK3Q9H999 370 aa23.28■■□□□ 1.32
FNDC3B-207ENST00000469491 IDI1Q13907 227 aa23.27■■□□□ 1.32
FNDC3B-207ENST00000469491 CC2D1BQ5T0F9 858 aaKnown RBP23.26■■□□□ 1.31
FNDC3B-207ENST00000469491 TMEM132EQ6IEE7 984 aa23.26■■□□□ 1.31
FNDC3B-207ENST00000469491 SCAF11Q99590 1463 aaKnown RBP23.25■■□□□ 1.31
FNDC3B-207ENST00000469491 ADGRB3O60242 1522 aa23.23■■□□□ 1.31
FNDC3B-207ENST00000469491 KIF13AQ9H1H9 1805 aa23.23■■□□□ 1.31
FNDC3B-207ENST00000469491 PER1O15534 1290 aaPredicted RBP23.23■■□□□ 1.31
FNDC3B-207ENST00000469491 IQGAP1P46940 1657 aa23.23■■□□□ 1.31
FNDC3B-207ENST00000469491 TMC1Q8TDI8 760 aa23.22■■□□□ 1.31
FNDC3B-207ENST00000469491 SUPT16HQ9Y5B9 1047 aaKnown RBP23.22■■□□□ 1.31
FNDC3B-207ENST00000469491 TRAK1Q9UPV9 953 aa23.22■■□□□ 1.31
FNDC3B-207ENST00000469491 SYNMO15061 1565 aa23.21■■□□□ 1.31
FNDC3B-207ENST00000469491 MYOM2P54296 1465 aa23.21■■□□□ 1.31
FNDC3B-207ENST00000469491 ZMYM4Q5VZL5 1548 aa23.2■■□□□ 1.31
FNDC3B-207ENST00000469491 IFT172Q9UG01 1749 aa23.2■■□□□ 1.3
FNDC3B-207ENST00000469491 NEURL4Q96JN8 1562 aa23.18■■□□□ 1.3
FNDC3B-207ENST00000469491 BCANQ96GW7 911 aa23.16■■□□□ 1.3
FNDC3B-207ENST00000469491 EIF3AQ14152 1382 aaKnown RBP23.15■■□□□ 1.3
FNDC3B-207ENST00000469491 FKBP8Q14318 412 aa23.15■■□□□ 1.3
FNDC3B-207ENST00000469491 PPLO60437 1756 aa23.15■■□□□ 1.3
FNDC3B-207ENST00000469491 KTN1Q86UP2 1357 aaKnown RBP23.14■■□□□ 1.3
FNDC3B-207ENST00000469491 MYBBP1AQ9BQG0 1328 aaKnown RBP23.14■■□□□ 1.3
FNDC3B-207ENST00000469491 RALBP1Q15311 655 aa23.14■■□□□ 1.29
FNDC3B-207ENST00000469491 C14orf93Q9H972 538 aaKnown RBP23.14■■□□□ 1.29
FNDC3B-207ENST00000469491 ARHGAP31Q2M1Z3 1444 aa23.14■■□□□ 1.29
FNDC3B-207ENST00000469491 PNISRQ8TF01 805 aaKnown RBP23.13■■□□□ 1.29
FNDC3B-207ENST00000469491 NRXN1Q9ULB1 1477 aa23.13■■□□□ 1.29
FNDC3B-207ENST00000469491 KIAA1210Q9ULL0 1709 aa23.13■■□□□ 1.29
FNDC3B-207ENST00000469491 PIK3C2GO75747 1445 aa23.12■■□□□ 1.29
FNDC3B-207ENST00000469491 SLC52A1Q9NWF4 448 aa23.12■■□□□ 1.29
FNDC3B-207ENST00000469491 STAG3Q9UJ98 1225 aa23.12■■□□□ 1.29
FNDC3B-207ENST00000469491 ZC3H13Q5T200 1668 aaKnown RBP23.11■■□□□ 1.29
FNDC3B-207ENST00000469491 VGFO15240 615 aaPredicted RBP23.11■■□□□ 1.29
FNDC3B-207ENST00000469491 MYO5BQ9ULV0 1848 aa23.1■■□□□ 1.29
FNDC3B-207ENST00000469491 RPGRIP1LQ68CZ1 1315 aa23.1■■□□□ 1.29
FNDC3B-207ENST00000469491 PIK3C2BO00750 1634 aa23.1■■□□□ 1.29
FNDC3B-207ENST00000469491 SAFB2Q14151 953 aaKnown RBP eCLIP23.09■■□□□ 1.29
FNDC3B-207ENST00000469491 PREX1Q8TCU6 1659 aa23.09■■□□□ 1.29
FNDC3B-207ENST00000469491 CDCA8Q53HL2 280 aa23.09■■□□□ 1.29
FNDC3B-207ENST00000469491 KNSTRNQ9Y448 316 aa23.09■■□□□ 1.29
FNDC3B-207ENST00000469491 STK26Q9P289 416 aa23.08■■□□□ 1.29
FNDC3B-207ENST00000469491 PARD3Q8TEW0 1356 aa23.08■■□□□ 1.29
FNDC3B-207ENST00000469491 CENPJQ9HC77 1338 aaPredicted RBP23.07■■□□□ 1.28
FNDC3B-207ENST00000469491 CLTCQ00610 1675 aaKnown RBP23.06■■□□□ 1.28
FNDC3B-207ENST00000469491 NEXMIFQ5QGS0 1516 aa23.05■■□□□ 1.28
FNDC3B-207ENST00000469491 IRX6P78412 446 aaPredicted RBP23.05■■□□□ 1.28
FNDC3B-207ENST00000469491 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
FNDC3B-207ENST00000469491 ZBED9Q6R2W3 1325 aa23.04■■□□□ 1.28
FNDC3B-207ENST00000469491 ESF1Q9H501 851 aaKnown RBP23.04■■□□□ 1.28
FNDC3B-207ENST00000469491 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
FNDC3B-207ENST00000469491 ERVK-7P63135 1459 aa23.04■■□□□ 1.28
FNDC3B-207ENST00000469491 BRD4O60885 1362 aaPredicted RBP23.04■■□□□ 1.28
FNDC3B-207ENST00000469491 NEFLP07196 543 aa23.02■■□□□ 1.28
FNDC3B-207ENST00000469491 ADGRB1O14514 1584 aa23.02■■□□□ 1.28
FNDC3B-207ENST00000469491 TRHP20396 242 aaPredicted RBP23.02■■□□□ 1.27
FNDC3B-207ENST00000469491 AGLP35573 1532 aa23■■□□□ 1.27
FNDC3B-207ENST00000469491 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
FNDC3B-207ENST00000469491 PLPPR3Q6T4P5 718 aa23■■□□□ 1.27
FNDC3B-207ENST00000469491 TMEM131LA2VDJ0 1609 aa22.99■■□□□ 1.27
FNDC3B-207ENST00000469491 ARHGEF40Q8TER5 1519 aa22.99■■□□□ 1.27
FNDC3B-207ENST00000469491 SETBP1Q9Y6X0 1596 aa22.98■■□□□ 1.27
FNDC3B-207ENST00000469491 KDM5AP29375 1690 aaKnown RBP22.98■■□□□ 1.27
FNDC3B-207ENST00000469491 REREQ9P2R6 1566 aa22.98■■□□□ 1.27
FNDC3B-207ENST00000469491 MYOM1P52179 1685 aa22.97■■□□□ 1.27
FNDC3B-207ENST00000469491 SLC12A5Q9H2X9 1139 aa22.97■■□□□ 1.27
FNDC3B-207ENST00000469491 CARD14Q9BXL6 1004 aa22.97■■□□□ 1.27
FNDC3B-207ENST00000469491 PPP6R1Q9UPN7 881 aa22.96■■□□□ 1.27
FNDC3B-207ENST00000469491 ZMYM3Q14202 1370 aa22.94■■□□□ 1.26
FNDC3B-207ENST00000469491 LRPPRCP42704 1394 aaKnown RBP22.93■■□□□ 1.26
FNDC3B-207ENST00000469491 QRICH2Q9H0J4 1663 aa22.93■■□□□ 1.26
FNDC3B-207ENST00000469491 PPP2R1AP30153 589 aa22.92■■□□□ 1.26
FNDC3B-207ENST00000469491 CABP2Q9NPB3 220 aa22.92■■□□□ 1.26
FNDC3B-207ENST00000469491 SLC24A1O60721 1099 aa22.91■■□□□ 1.26
FNDC3B-207ENST00000469491 MYO3AQ8NEV4 1616 aa22.9■■□□□ 1.26
FNDC3B-207ENST00000469491 CEBPAP49715 358 aaPredicted RBP22.9■■□□□ 1.26
FNDC3B-207ENST00000469491 SBNO2Q9Y2G9 1366 aa22.9■■□□□ 1.26
FNDC3B-207ENST00000469491 ASXL1Q8IXJ9 1541 aa22.89■■□□□ 1.25
FNDC3B-207ENST00000469491 MINK1Q8N4C8 1332 aaPredicted RBP22.89■■□□□ 1.25
FNDC3B-207ENST00000469491 PRAM1Q96QH2 718 aa22.88■■□□□ 1.25
FNDC3B-207ENST00000469491 TNNT2P45379 298 aaPredicted RBP22.88■■□□□ 1.25
FNDC3B-207ENST00000469491 ZFYVE9O95405 1425 aa22.87■■□□□ 1.25
FNDC3B-207ENST00000469491 A2ML1A8K2U0 1454 aa22.87■■□□□ 1.25
FNDC3B-207ENST00000469491 POGKQ9P215 609 aa22.87■■□□□ 1.25
FNDC3B-207ENST00000469491 ARHGEF28Q8N1W1 1705 aaKnown RBP22.86■■□□□ 1.25
FNDC3B-207ENST00000469491 SPATA31D1Q6ZQQ2 1576 aa22.85■■□□□ 1.25
FNDC3B-207ENST00000469491 SRPK2P78362 688 aaKnown RBP22.85■■□□□ 1.25
FNDC3B-207ENST00000469491 ADAMTS8Q9UP79 889 aa22.85■■□□□ 1.25
FNDC3B-207ENST00000469491 EVC2Q86UK5 1308 aa22.84■■□□□ 1.25
FNDC3B-207ENST00000469491 RIMS2Q9UQ26 1411 aa22.83■■□□□ 1.25
FNDC3B-207ENST00000469491 NSD3Q9BZ95 1437 aa22.82■■□□□ 1.24
FNDC3B-207ENST00000469491 YTHDC2Q9H6S0 1430 aaKnown RBP22.82■■□□□ 1.24
FNDC3B-207ENST00000469491 WAPLQ7Z5K2 1190 aa22.81■■□□□ 1.24
FNDC3B-207ENST00000469491 ALKQ9UM73 1620 aa22.81■■□□□ 1.24
FNDC3B-207ENST00000469491 TULP4Q9NRJ4 1543 aa22.8■■□□□ 1.24
FNDC3B-207ENST00000469491 NUDCQ9Y266 331 aa22.8■■□□□ 1.24
FNDC3B-207ENST00000469491 WDR43Q15061 677 aaKnown RBP eCLIP22.78■■□□□ 1.247e-7■■□□□ 12.6
FNDC3B-207ENST00000469491 TNRQ92752 1358 aa22.77■■□□□ 1.24
FNDC3B-207ENST00000469491 CDCA7LQ96GN5 454 aa22.77■■□□□ 1.24
FNDC3B-207ENST00000469491 PTPRMP28827 1452 aa22.77■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms