RNA–Protein interactions for RNA: ENST00000469476.2

TRIT1-208, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-208ENST00000469476 ARID3CA6NKF2 412 aa8.67□□□□□ -1.02
TRIT1-208ENST00000469476 ARHGEF11O15085 1522 aa8.67□□□□□ -1.02
TRIT1-208ENST00000469476 MCM6Q14566 821 aa8.67□□□□□ -1.02
TRIT1-208ENST00000469476 CYB5RLQ6IPT4 315 aa8.67□□□□□ -1.02
TRIT1-208ENST00000469476 ZNF710Q8N1W2 664 aa8.67□□□□□ -1.02
TRIT1-208ENST00000469476 RBM46Q8TBY0 533 aaKnown RBP8.67□□□□□ -1.02
TRIT1-208ENST00000469476 TBC1D2Q9BYX2 928 aa8.67□□□□□ -1.02
TRIT1-208ENST00000469476 PPP4R3BQ5MIZ7 849 aa8.66□□□□□ -1.02
TRIT1-208ENST00000469476 SCUBE2Q9NQ36 999 aa8.66□□□□□ -1.02
TRIT1-208ENST00000469476 PPP1R3GB7ZBB8 358 aa8.65□□□□□ -1.02
TRIT1-208ENST00000469476 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
TRIT1-208ENST00000469476 NUDT18Q6ZVK8 323 aa8.65□□□□□ -1.02
TRIT1-208ENST00000469476 LIMD1Q9UGP4 676 aa8.65□□□□□ -1.02
TRIT1-208ENST00000469476 SMARCA4P51532 1647 aa8.65□□□□□ -1.03
TRIT1-208ENST00000469476 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.64□□□□□ -1.03
TRIT1-208ENST00000469476 HOXB1P14653 301 aaPredicted RBP8.64□□□□□ -1.03
TRIT1-208ENST00000469476 CD46P15529 392 aa8.64□□□□□ -1.03
TRIT1-208ENST00000469476 SPIRE2Q8WWL2 714 aa8.64□□□□□ -1.03
TRIT1-208ENST00000469476 CADPSQ9ULU8 1353 aa8.63□□□□□ -1.03
TRIT1-208ENST00000469476 PTPREP23469 700 aa8.63□□□□□ -1.03
TRIT1-208ENST00000469476 CLK2P49760 499 aaKnown RBP8.63□□□□□ -1.03
TRIT1-208ENST00000469476 PROX2Q3B8N5 592 aa8.63□□□□□ -1.03
TRIT1-208ENST00000469476 OTUD5Q96G74 571 aa8.63□□□□□ -1.03
TRIT1-208ENST00000469476 POM121Q96HA1 1249 aa8.63□□□□□ -1.03
TRIT1-208ENST00000469476 A6NJR5 290 aa8.62□□□□□ -1.03
TRIT1-208ENST00000469476 TRIM6-TRIM34B2RNG4 842 aa8.62□□□□□ -1.03
TRIT1-208ENST00000469476 SMAPO00193 183 aa8.62□□□□□ -1.03
TRIT1-208ENST00000469476 TATDN2Q93075 761 aa8.62□□□□□ -1.03
TRIT1-208ENST00000469476 PNMA3Q9UL41 463 aa8.62□□□□□ -1.03
TRIT1-208ENST00000469476 MAMSTRQ6ZN01 415 aa8.61□□□□□ -1.03
TRIT1-208ENST00000469476 PSDA5PKW4 1024 aaPredicted RBP8.6□□□□□ -1.03
TRIT1-208ENST00000469476 ARID3AQ99856 593 aa8.6□□□□□ -1.03
TRIT1-208ENST00000469476 APBB1O00213 710 aa8.59□□□□□ -1.03
TRIT1-208ENST00000469476 TRAK2O60296 914 aa8.59□□□□□ -1.03
TRIT1-208ENST00000469476 RFC5P40937 340 aa8.59□□□□□ -1.03
TRIT1-208ENST00000469476 POTEEQ6S8J3 1075 aa8.59□□□□□ -1.03
TRIT1-208ENST00000469476 TMEM134Q9H6X4 195 aa8.59□□□□□ -1.03
TRIT1-208ENST00000469476 SNRKQ9NRH2 765 aa8.59□□□□□ -1.03
TRIT1-208ENST00000469476 PEG3Q9GZU2 1588 aa8.59□□□□□ -1.03
TRIT1-208ENST00000469476 DDX11L8A8MPP1 907 aa8.58□□□□□ -1.04
TRIT1-208ENST00000469476 DNAJB2P25686 324 aa8.58□□□□□ -1.04
TRIT1-208ENST00000469476 RIC3Q7Z5B4 369 aa8.58□□□□□ -1.04
TRIT1-208ENST00000469476 ATP1B4Q9UN42 357 aaPredicted RBP8.58□□□□□ -1.04
TRIT1-208ENST00000469476 MOXD2PA6NHM9 499 aa8.57□□□□□ -1.04
TRIT1-208ENST00000469476 NDUFV2P19404 249 aa8.57□□□□□ -1.04
TRIT1-208ENST00000469476 PPP2R2DQ66LE6 453 aa8.57□□□□□ -1.04
TRIT1-208ENST00000469476 FNBP4Q8N3X1 1017 aaPredicted RBP8.57□□□□□ -1.04
TRIT1-208ENST00000469476 CEP164Q9UPV0 1460 aa8.57□□□□□ -1.04
TRIT1-208ENST00000469476 NBPF26B4DH59 902 aa8.56□□□□□ -1.04
TRIT1-208ENST00000469476 SPTLC1O15269 473 aa8.56□□□□□ -1.04
TRIT1-208ENST00000469476 PSEN2P49810 448 aa8.56□□□□□ -1.04
TRIT1-208ENST00000469476 RSBN1LQ6PCB5 846 aaPredicted RBP8.56□□□□□ -1.04
TRIT1-208ENST00000469476 KCNK17Q96T54 332 aa8.56□□□□□ -1.04
TRIT1-208ENST00000469476 ZBED2Q9BTP6 218 aa8.56□□□□□ -1.04
TRIT1-208ENST00000469476 PCDHB15Q9Y5E8 787 aa8.56□□□□□ -1.04
TRIT1-208ENST00000469476 ARAP1Q96P48 1450 aa8.56□□□□□ -1.04
TRIT1-208ENST00000469476 QPCTQ16769 361 aa8.55□□□□□ -1.04
TRIT1-208ENST00000469476 SPDYE5A6NIY4 337 aa8.54□□□□□ -1.04
TRIT1-208ENST00000469476 DIXDC1Q155Q3 683 aa8.54□□□□□ -1.04
TRIT1-208ENST00000469476 PACS2Q86VP3 889 aa8.54□□□□□ -1.04
TRIT1-208ENST00000469476 KIAA1468Q9P260 1216 aa8.54□□□□□ -1.04
TRIT1-208ENST00000469476 COG6Q9Y2V7 657 aa8.54□□□□□ -1.04
TRIT1-208ENST00000469476 SNPHO15079 494 aa8.53□□□□□ -1.04
TRIT1-208ENST00000469476 SLC10A3P09131 477 aa8.53□□□□□ -1.04
TRIT1-208ENST00000469476 CSPP1Q1MSJ5 1256 aa8.53□□□□□ -1.04
TRIT1-208ENST00000469476 TUSC1Q2TAM9 212 aa8.53□□□□□ -1.04
TRIT1-208ENST00000469476 SULF1Q8IWU6 871 aa8.53□□□□□ -1.04
TRIT1-208ENST00000469476 LILRB3O75022 631 aa8.52□□□□□ -1.05
TRIT1-208ENST00000469476 RTL5Q5HYW3 569 aaPredicted RBP8.52□□□□□ -1.05
TRIT1-208ENST00000469476 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
TRIT1-208ENST00000469476 PROSER2Q86WR7 435 aaPredicted RBP8.52□□□□□ -1.05
TRIT1-208ENST00000469476 NUTM1Q86Y26 1132 aa8.52□□□□□ -1.05
TRIT1-208ENST00000469476 BANK1Q8NDB2 785 aa8.52□□□□□ -1.05
TRIT1-208ENST00000469476 PODXL2Q9NZ53 605 aa8.52□□□□□ -1.05
TRIT1-208ENST00000469476 ZNF777Q9ULD5 760 aaPredicted RBP8.52□□□□□ -1.05
TRIT1-208ENST00000469476 FANCD2Q9BXW9 1451 aa8.51□□□□□ -1.05
TRIT1-208ENST00000469476 CCDC82Q8N4S0 544 aa8.51□□□□□ -1.05
TRIT1-208ENST00000469476 MTMR14Q8NCE2 650 aa8.51□□□□□ -1.05
TRIT1-208ENST00000469476 RDH13Q8NBN7 331 aa8.5□□□□□ -1.05
TRIT1-208ENST00000469476 CABLES1Q8TDN4 633 aa8.5□□□□□ -1.05
TRIT1-208ENST00000469476 HLA-CQ95604 372 aa8.5□□□□□ -1.05
TRIT1-208ENST00000469476 AXIN2Q9Y2T1 843 aa8.5□□□□□ -1.05
TRIT1-208ENST00000469476 GCGRP47871 477 aa8.49□□□□□ -1.05
TRIT1-208ENST00000469476 GUCA2AQ02747 115 aa8.49□□□□□ -1.05
TRIT1-208ENST00000469476 SWT1Q5T5J6 900 aaKnown RBP8.49□□□□□ -1.05
TRIT1-208ENST00000469476 SEPT9Q9UHD8 586 aaPredicted RBP8.49□□□□□ -1.05
TRIT1-208ENST00000469476 PCDHGC3Q9UN70 934 aa8.49□□□□□ -1.05
TRIT1-208ENST00000469476 URB2Q14146 1524 aaKnown RBP8.49□□□□□ -1.05
TRIT1-208ENST00000469476 KDM4AO75164 1064 aa8.48□□□□□ -1.05
TRIT1-208ENST00000469476 TMEM259Q4ZIN3 620 aa8.48□□□□□ -1.05
TRIT1-208ENST00000469476 HOXA2O43364 376 aa8.47□□□□□ -1.05
TRIT1-208ENST00000469476 GJA5P36382 358 aa8.47□□□□□ -1.05
TRIT1-208ENST00000469476 VARS2Q5ST30 1063 aaKnown RBP8.47□□□□□ -1.05
TRIT1-208ENST00000469476 ZNF608Q9ULD9 1512 aaPredicted RBP8.47□□□□□ -1.05
TRIT1-208ENST00000469476 RSF1Q96T23 1441 aaPredicted RBP8.46□□□□□ -1.05
TRIT1-208ENST00000469476 HRCP23327 699 aa8.46□□□□□ -1.06
TRIT1-208ENST00000469476 RABGEF1Q9UJ41 708 aa8.46□□□□□ -1.06
TRIT1-208ENST00000469476 MROH2BQ7Z745 1585 aa8.45□□□□□ -1.06
TRIT1-208ENST00000469476 ARHGAP33O14559 1287 aa8.45□□□□□ -1.06
TRIT1-208ENST00000469476 RAD21O60216 631 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms