RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 PRAG1Q86YV5 1406 aa19.12■□□□□ 0.65
SMARCD3-205ENST00000469154 CCDC144AA2RUR9 1427 aa19.11■□□□□ 0.65
SMARCD3-205ENST00000469154 TET3O43151 1660 aa19.1■□□□□ 0.65
SMARCD3-205ENST00000469154 CEP152O94986 1710 aa19.09■□□□□ 0.65
SMARCD3-205ENST00000469154 ABCC3O15438 1527 aa19.09■□□□□ 0.65
SMARCD3-205ENST00000469154 PLA2R1Q13018 1463 aa19.08■□□□□ 0.64
SMARCD3-205ENST00000469154 LMTK2Q8IWU2 1503 aa19.08■□□□□ 0.64
SMARCD3-205ENST00000469154 GPRASP1Q5JY77 1395 aa19.07■□□□□ 0.64
SMARCD3-205ENST00000469154 EFCAB6Q5THR3 1501 aa19.06■□□□□ 0.64
SMARCD3-205ENST00000469154 PARD3Q8TEW0 1356 aa19.04■□□□□ 0.64
SMARCD3-205ENST00000469154 NPATQ14207 1427 aa19.04■□□□□ 0.64
SMARCD3-205ENST00000469154 CCDC136Q96JN2 1154 aa19.03■□□□□ 0.64
SMARCD3-205ENST00000469154 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
SMARCD3-205ENST00000469154 NLRP13Q86W25 1043 aa19.01■□□□□ 0.63
SMARCD3-205ENST00000469154 ESF1Q9H501 851 aaKnown RBP19.01■□□□□ 0.63
SMARCD3-205ENST00000469154 CAMSAP1Q5T5Y3 1602 aa19.01■□□□□ 0.63
SMARCD3-205ENST00000469154 PTPRTO14522 1441 aa19.01■□□□□ 0.63
SMARCD3-205ENST00000469154 ZC3H13Q5T200 1668 aaKnown RBP19■□□□□ 0.63
SMARCD3-205ENST00000469154 CFAP65Q6ZU64 1925 aaKnown RBP19■□□□□ 0.63
SMARCD3-205ENST00000469154 SPHKAPQ2M3C7 1700 aa18.98■□□□□ 0.63
SMARCD3-205ENST00000469154 INSRP06213 1382 aa18.97■□□□□ 0.63
SMARCD3-205ENST00000469154 TRPM2O94759 1503 aa18.97■□□□□ 0.63
SMARCD3-205ENST00000469154 ARHGAP31Q2M1Z3 1444 aa18.97■□□□□ 0.63
SMARCD3-205ENST00000469154 PDE3BQ13370 1112 aa18.96■□□□□ 0.63
SMARCD3-205ENST00000469154 RGL3Q3MIN7 710 aa18.96■□□□□ 0.63
SMARCD3-205ENST00000469154 CLTCQ00610 1675 aaKnown RBP18.96■□□□□ 0.63
SMARCD3-205ENST00000469154 FBXO31Q5XUX0 539 aaPredicted RBP18.95■□□□□ 0.62
SMARCD3-205ENST00000469154 UGGT1Q9NYU2 1555 aa18.94■□□□□ 0.62
SMARCD3-205ENST00000469154 RRP1P56182 461 aaKnown RBP18.94■□□□□ 0.62
SMARCD3-205ENST00000469154 NBPF1Q3BBV0 1214 aa18.94■□□□□ 0.62
SMARCD3-205ENST00000469154 PER1O15534 1290 aaPredicted RBP18.93■□□□□ 0.62
SMARCD3-205ENST00000469154 CLTCL1P53675 1640 aa18.92■□□□□ 0.62
SMARCD3-205ENST00000469154 ZMYM3Q14202 1370 aa18.92■□□□□ 0.62
SMARCD3-205ENST00000469154 DISP3Q9P2K9 1392 aa18.92■□□□□ 0.62
SMARCD3-205ENST00000469154 NOS1P29475 1434 aa18.92■□□□□ 0.62
SMARCD3-205ENST00000469154 BLMP54132 1417 aaPredicted RBP18.92■□□□□ 0.62
SMARCD3-205ENST00000469154 SENP3-EIF4A1A0A087X0R7 540 aa18.91■□□□□ 0.62
SMARCD3-205ENST00000469154 TESK2Q96S53 571 aa18.91■□□□□ 0.62
SMARCD3-205ENST00000469154 RCAN3Q9UKA8 241 aa18.9■□□□□ 0.62
SMARCD3-205ENST00000469154 NOP58Q9Y2X3 529 aaKnown RBP18.9■□□□□ 0.62
SMARCD3-205ENST00000469154 IQGAP1P46940 1657 aa18.89■□□□□ 0.62
SMARCD3-205ENST00000469154 CHGAP10645 457 aaKnown RBP18.89■□□□□ 0.61
SMARCD3-205ENST00000469154 MADDQ8WXG6 1647 aa18.89■□□□□ 0.61
SMARCD3-205ENST00000469154 TMF1P82094 1093 aa18.88■□□□□ 0.61
SMARCD3-205ENST00000469154 SYNMO15061 1565 aa18.87■□□□□ 0.61
SMARCD3-205ENST00000469154 PREX1Q8TCU6 1659 aa18.87■□□□□ 0.61
SMARCD3-205ENST00000469154 ERVK-7P63135 1459 aa18.87■□□□□ 0.61
SMARCD3-205ENST00000469154 IDI1Q13907 227 aa18.86■□□□□ 0.61
SMARCD3-205ENST00000469154 PLPPR3Q6T4P5 718 aa18.86■□□□□ 0.61
SMARCD3-205ENST00000469154 ANP32AP39687 249 aaKnown RBP18.86■□□□□ 0.61
SMARCD3-205ENST00000469154 CEBPAP49715 358 aaPredicted RBP18.86■□□□□ 0.61
SMARCD3-205ENST00000469154 SLC52A1Q9NWF4 448 aa18.85■□□□□ 0.61
SMARCD3-205ENST00000469154 BCL11AQ9H165 835 aa18.84■□□□□ 0.61
SMARCD3-205ENST00000469154 PANK3Q9H999 370 aa18.84■□□□□ 0.61
SMARCD3-205ENST00000469154 FER1L4A9Z1Z3 1794 aa18.83■□□□□ 0.61
SMARCD3-205ENST00000469154 EXOC6Q8TAG9 804 aa18.83■□□□□ 0.6
SMARCD3-205ENST00000469154 CC2D1BQ5T0F9 858 aaKnown RBP18.82■□□□□ 0.6
SMARCD3-205ENST00000469154 SPATA31D1Q6ZQQ2 1576 aa18.81■□□□□ 0.6
SMARCD3-205ENST00000469154 KIF1BO60333 1816 aa18.81■□□□□ 0.6
SMARCD3-205ENST00000469154 PIK3C2BO00750 1634 aa18.81■□□□□ 0.6
SMARCD3-205ENST00000469154 IPO9Q96P70 1041 aaKnown RBP18.81■□□□□ 0.6
SMARCD3-205ENST00000469154 TCERG1O14776 1098 aaKnown RBP18.8■□□□□ 0.6
SMARCD3-205ENST00000469154 SALL2Q9Y467 1007 aaPredicted RBP18.8■□□□□ 0.6
SMARCD3-205ENST00000469154 MROH2AA6NES4 1674 aa18.8■□□□□ 0.6
SMARCD3-205ENST00000469154 ADGRB3O60242 1522 aa18.78■□□□□ 0.6
SMARCD3-205ENST00000469154 KIAA1210Q9ULL0 1709 aa18.78■□□□□ 0.6
SMARCD3-205ENST00000469154 STAG3Q9UJ98 1225 aa18.78■□□□□ 0.6
SMARCD3-205ENST00000469154 TNRQ92752 1358 aa18.78■□□□□ 0.6
SMARCD3-205ENST00000469154 STAC3Q96MF2 364 aa18.77■□□□□ 0.6
SMARCD3-205ENST00000469154 C3P01024 1663 aa18.76■□□□□ 0.59
SMARCD3-205ENST00000469154 NEURL4Q96JN8 1562 aa18.76■□□□□ 0.59
SMARCD3-205ENST00000469154 CDCA7LQ96GN5 454 aa18.76■□□□□ 0.59
SMARCD3-205ENST00000469154 SCAF11Q99590 1463 aaKnown RBP18.76■□□□□ 0.59
SMARCD3-205ENST00000469154 PAK3O75914 559 aaPredicted RBP18.75■□□□□ 0.59
SMARCD3-205ENST00000469154 ADAMTSL3P82987 1691 aa18.75■□□□□ 0.59
SMARCD3-205ENST00000469154 RIMS1Q86UR5 1692 aaKnown RBP18.75■□□□□ 0.59
SMARCD3-205ENST00000469154 MYOM1P52179 1685 aa18.75■□□□□ 0.59
SMARCD3-205ENST00000469154 CDCA8Q53HL2 280 aa18.74■□□□□ 0.59
SMARCD3-205ENST00000469154 MS4A1P11836 297 aa18.74■□□□□ 0.59
SMARCD3-205ENST00000469154 NUTM2DQ5VT03 806 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-205ENST00000469154 ZBTB47Q9UFB7 747 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-205ENST00000469154 KDM5AP29375 1690 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-205ENST00000469154 ASXL1Q8IXJ9 1541 aa18.72■□□□□ 0.59
SMARCD3-205ENST00000469154 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
SMARCD3-205ENST00000469154 TMEM131LA2VDJ0 1609 aa18.72■□□□□ 0.59
SMARCD3-205ENST00000469154 ADGRF5Q8IZF2 1346 aa18.71■□□□□ 0.59
SMARCD3-205ENST00000469154 RPGRIP1LQ68CZ1 1315 aa18.7■□□□□ 0.58
SMARCD3-205ENST00000469154 EIF3AQ14152 1382 aaKnown RBP18.7■□□□□ 0.58
SMARCD3-205ENST00000469154 MYO5BQ9ULV0 1848 aa18.69■□□□□ 0.58
SMARCD3-205ENST00000469154 PIK3C2GO75747 1445 aa18.69■□□□□ 0.58
SMARCD3-205ENST00000469154 PPP2R1AP30153 589 aa18.69■□□□□ 0.58
SMARCD3-205ENST00000469154 NPC1L1Q9UHC9 1359 aa18.68■□□□□ 0.58
SMARCD3-205ENST00000469154 A2ML1A8K2U0 1454 aa18.68■□□□□ 0.58
SMARCD3-205ENST00000469154 WDR43Q15061 677 aaKnown RBP eCLIP18.68■□□□□ 0.58
SMARCD3-205ENST00000469154 PDE4AP27815 886 aa18.67■□□□□ 0.58
SMARCD3-205ENST00000469154 ADAMTS8Q9UP79 889 aa18.67■□□□□ 0.58
SMARCD3-205ENST00000469154 MYOM2P54296 1465 aa18.67■□□□□ 0.58
SMARCD3-205ENST00000469154 IFT172Q9UG01 1749 aa18.67■□□□□ 0.58
SMARCD3-205ENST00000469154 AMER1Q5JTC6 1135 aaPredicted RBP18.66■□□□□ 0.58
SMARCD3-205ENST00000469154 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms