RNA–Protein interactions for RNA: ENST00000468753.5

COL4A3-203, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-203ENST00000468753 NOS1P29475 1434 aa13□□□□□ -0.33
COL4A3-203ENST00000468753 ILDR1Q86SU0 546 aaPredicted RBP13□□□□□ -0.33
COL4A3-203ENST00000468753 THEMISQ8N1K5 641 aaPredicted RBP13□□□□□ -0.33
COL4A3-203ENST00000468753 SYNMO15061 1565 aa12.99□□□□□ -0.33
COL4A3-203ENST00000468753 POLR1AO95602 1720 aaPredicted RBP12.99□□□□□ -0.33
COL4A3-203ENST00000468753 UBR1Q8IWV7 1749 aa12.99□□□□□ -0.33
COL4A3-203ENST00000468753 RPRD2Q5VT52 1461 aaKnown RBP12.98□□□□□ -0.33
COL4A3-203ENST00000468753 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
COL4A3-203ENST00000468753 IQGAP3Q86VI3 1631 aa12.98□□□□□ -0.33
COL4A3-203ENST00000468753 LTBP4Q8N2S1 1624 aa12.98□□□□□ -0.33
COL4A3-203ENST00000468753 GCC2Q8IWJ2 1684 aa12.97□□□□□ -0.33
COL4A3-203ENST00000468753 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
COL4A3-203ENST00000468753 ARHGAP23Q9P227 1491 aa12.97□□□□□ -0.33
COL4A3-203ENST00000468753 NAIPQ13075 1403 aa12.96□□□□□ -0.33
COL4A3-203ENST00000468753 PIK3C2BO00750 1634 aa12.96□□□□□ -0.33
COL4A3-203ENST00000468753 MED14O60244 1454 aa12.96□□□□□ -0.34
COL4A3-203ENST00000468753 NUP155O75694 1391 aa12.95□□□□□ -0.34
COL4A3-203ENST00000468753 SLIT1O75093 1534 aa12.95□□□□□ -0.34
COL4A3-203ENST00000468753 IDI1Q13907 227 aa12.95□□□□□ -0.34
COL4A3-203ENST00000468753 ANKLE2Q86XL3 938 aa12.95□□□□□ -0.34
COL4A3-203ENST00000468753 FBXO41Q8TF61 875 aa12.95□□□□□ -0.34
COL4A3-203ENST00000468753 KDM5AP29375 1690 aaKnown RBP12.95□□□□□ -0.34
COL4A3-203ENST00000468753 HFM1A2PYH4 1435 aa12.95□□□□□ -0.34
COL4A3-203ENST00000468753 E9PCH4 1651 aa12.94□□□□□ -0.34
COL4A3-203ENST00000468753 ZNF335Q9H4Z2 1342 aaPredicted RBP12.93□□□□□ -0.34
COL4A3-203ENST00000468753 NPHP4O75161 1426 aaPredicted RBP12.93□□□□□ -0.34
COL4A3-203ENST00000468753 SLC52A1Q9NWF4 448 aa12.92□□□□□ -0.34
COL4A3-203ENST00000468753 ADGRB3O60242 1522 aa12.92□□□□□ -0.34
COL4A3-203ENST00000468753 SCAF11Q99590 1463 aaKnown RBP12.91□□□□□ -0.34
COL4A3-203ENST00000468753 TMEM2Q9UHN6 1383 aa12.91□□□□□ -0.34
COL4A3-203ENST00000468753 IQGAP1P46940 1657 aa12.9□□□□□ -0.34
COL4A3-203ENST00000468753 LTKP29376 864 aa12.9□□□□□ -0.34
COL4A3-203ENST00000468753 IQSEC2Q5JU85 1478 aa12.9□□□□□ -0.34
COL4A3-203ENST00000468753 TMEM131LA2VDJ0 1609 aa12.88□□□□□ -0.35
COL4A3-203ENST00000468753 TXNDC2Q86VQ3 553 aa12.87□□□□□ -0.35
COL4A3-203ENST00000468753 STAG3Q9UJ98 1225 aa12.87□□□□□ -0.35
COL4A3-203ENST00000468753 ZFYVE9O95405 1425 aa12.86□□□□□ -0.35
COL4A3-203ENST00000468753 MYO5BQ9ULV0 1848 aa12.85□□□□□ -0.35
COL4A3-203ENST00000468753 CPS1P31327 1500 aa12.85□□□□□ -0.35
COL4A3-203ENST00000468753 EID1Q9Y6B2 187 aa12.85□□□□□ -0.35
COL4A3-203ENST00000468753 SPHKAPQ2M3C7 1700 aa12.85□□□□□ -0.35
COL4A3-203ENST00000468753 STRCP1A6NGW2 1772 aa12.83□□□□□ -0.36
COL4A3-203ENST00000468753 RIMS2Q9UQ26 1411 aa12.82□□□□□ -0.36
COL4A3-203ENST00000468753 TRPM2O94759 1503 aa12.82□□□□□ -0.36
COL4A3-203ENST00000468753 TRIM52Q96A61 297 aa12.81□□□□□ -0.36
COL4A3-203ENST00000468753 CLTCL1P53675 1640 aa12.8□□□□□ -0.36
COL4A3-203ENST00000468753 PLEKHG1Q9ULL1 1385 aa12.8□□□□□ -0.36
COL4A3-203ENST00000468753 CHGAP10645 457 aaKnown RBP12.79□□□□□ -0.36
COL4A3-203ENST00000468753 LHX8Q68G74 356 aa12.79□□□□□ -0.36
COL4A3-203ENST00000468753 LRRC7Q96NW7 1537 aa12.78□□□□□ -0.36
COL4A3-203ENST00000468753 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
COL4A3-203ENST00000468753 SETD5Q9C0A6 1442 aa12.78□□□□□ -0.36
COL4A3-203ENST00000468753 HDGFP51858 240 aaKnown RBP12.77□□□□□ -0.37
COL4A3-203ENST00000468753 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.77□□□□□ -0.37
COL4A3-203ENST00000468753 SLC26A8Q96RN1 970 aa12.77□□□□□ -0.37
COL4A3-203ENST00000468753 SPDYE2BA6NHP3 402 aa12.76□□□□□ -0.37
COL4A3-203ENST00000468753 SPDYE6P0CI01 402 aa12.76□□□□□ -0.37
COL4A3-203ENST00000468753 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
COL4A3-203ENST00000468753 SPDYE2Q495Y8 402 aa12.76□□□□□ -0.37
COL4A3-203ENST00000468753 UBAP1LF5GYI3 381 aa12.75□□□□□ -0.37
COL4A3-203ENST00000468753 PPP1R15AO75807 674 aaPredicted RBP12.75□□□□□ -0.37
COL4A3-203ENST00000468753 NWD1Q149M9 1564 aa12.75□□□□□ -0.37
COL4A3-203ENST00000468753 ADAMTS13Q76LX8 1427 aa12.75□□□□□ -0.37
COL4A3-203ENST00000468753 ALKQ9UM73 1620 aa12.75□□□□□ -0.37
COL4A3-203ENST00000468753 ACIN1Q9UKV3 1341 aaKnown RBP12.74□□□□□ -0.37
COL4A3-203ENST00000468753 KCNA6P17658 529 aa12.74□□□□□ -0.37
COL4A3-203ENST00000468753 NUTM2DQ5VT03 806 aaPredicted RBP12.74□□□□□ -0.37
COL4A3-203ENST00000468753 MPHOSPH9Q99550 1183 aa12.74□□□□□ -0.37
COL4A3-203ENST00000468753 NEXMIFQ5QGS0 1516 aa12.73□□□□□ -0.37
COL4A3-203ENST00000468753 RAB3GAP2Q9H2M9 1393 aa12.73□□□□□ -0.37
COL4A3-203ENST00000468753 TBX22Q9Y458 520 aa12.73□□□□□ -0.37
COL4A3-203ENST00000468753 KIF1BO60333 1816 aa12.73□□□□□ -0.37
COL4A3-203ENST00000468753 XIRP1Q702N8 1843 aaKnown RBP12.73□□□□□ -0.37
COL4A3-203ENST00000468753 DIP2AQ14689 1571 aa12.73□□□□□ -0.37
COL4A3-203ENST00000468753 GABBR2O75899 941 aa12.72□□□□□ -0.37
COL4A3-203ENST00000468753 NRXN3Q9Y4C0 1643 aa12.72□□□□□ -0.37
COL4A3-203ENST00000468753 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
COL4A3-203ENST00000468753 BCANQ96GW7 911 aa12.71□□□□□ -0.37
COL4A3-203ENST00000468753 SETBP1Q9Y6X0 1596 aa12.71□□□□□ -0.37
COL4A3-203ENST00000468753 CHD2O14647 1828 aaKnown RBP12.71□□□□□ -0.38
COL4A3-203ENST00000468753 TOM1O60784 492 aa12.7□□□□□ -0.38
COL4A3-203ENST00000468753 ZNF326Q5BKZ1 582 aaKnown RBP12.7□□□□□ -0.38
COL4A3-203ENST00000468753 TMEM94Q12767 1356 aa12.69□□□□□ -0.38
COL4A3-203ENST00000468753 PIK3R4Q99570 1358 aa12.69□□□□□ -0.38
COL4A3-203ENST00000468753 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
COL4A3-203ENST00000468753 CCDC144AA2RUR9 1427 aa12.68□□□□□ -0.38
COL4A3-203ENST00000468753 RPGRIP1LQ68CZ1 1315 aa12.67□□□□□ -0.38
COL4A3-203ENST00000468753 HRCP23327 699 aa12.67□□□□□ -0.38
COL4A3-203ENST00000468753 PROSER2Q86WR7 435 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-203ENST00000468753 SPATA31E1Q6ZUB1 1445 aa12.67□□□□□ -0.38
COL4A3-203ENST00000468753 PTPRUQ92729 1446 aa12.67□□□□□ -0.38
COL4A3-203ENST00000468753 SSUH2Q9Y2M2 353 aa12.66□□□□□ -0.38
COL4A3-203ENST00000468753 PPLO60437 1756 aa12.66□□□□□ -0.38
COL4A3-203ENST00000468753 PIP4K2BP78356 416 aa12.65□□□□□ -0.38
COL4A3-203ENST00000468753 XRN1Q8IZH2 1706 aaKnown RBP12.65□□□□□ -0.38
COL4A3-203ENST00000468753 SPDYE1Q8NFV5 336 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-203ENST00000468753 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
COL4A3-203ENST00000468753 SETD1AO15047 1707 aaKnown RBP12.64□□□□□ -0.39
COL4A3-203ENST00000468753 METP08581 1390 aa12.64□□□□□ -0.39
COL4A3-203ENST00000468753 NCOA3Q9Y6Q9 1424 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms