RNA–Protein interactions for RNA: ENST00000468518.1

LAMB1-206, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-206ENST00000468518 NUP155O75694 1391 aa19.68■□□□□ 0.74
LAMB1-206ENST00000468518 MIER1Q8N108 512 aa19.67■□□□□ 0.74
LAMB1-206ENST00000468518 CENPBP07199 599 aaPredicted RBP19.65■□□□□ 0.74
LAMB1-206ENST00000468518 THEMISQ8N1K5 641 aaPredicted RBP19.64■□□□□ 0.73
LAMB1-206ENST00000468518 L3MBTL2Q969R5 705 aa19.62■□□□□ 0.73
LAMB1-206ENST00000468518 UBR1Q8IWV7 1749 aa19.62■□□□□ 0.73
LAMB1-206ENST00000468518 LRP6O75581 1613 aa19.62■□□□□ 0.73
LAMB1-206ENST00000468518 RALGAPBQ86X10 1494 aa19.59■□□□□ 0.73
LAMB1-206ENST00000468518 SPATA31E1Q6ZUB1 1445 aa19.59■□□□□ 0.73
LAMB1-206ENST00000468518 COL16A1Q07092 1604 aaPredicted RBP19.58■□□□□ 0.73
LAMB1-206ENST00000468518 FOXD1Q16676 465 aa19.56■□□□□ 0.72
LAMB1-206ENST00000468518 PRDM15P57071 1507 aaPredicted RBP19.56■□□□□ 0.72
LAMB1-206ENST00000468518 TET3O43151 1660 aa19.54■□□□□ 0.72
LAMB1-206ENST00000468518 JCADQ9P266 1359 aa19.54■□□□□ 0.72
LAMB1-206ENST00000468518 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
LAMB1-206ENST00000468518 EIF4G2P78344 907 aaKnown RBP eCLIP19.53■□□□□ 0.72
LAMB1-206ENST00000468518 LAMC1P11047 1609 aa19.53■□□□□ 0.72
LAMB1-206ENST00000468518 CDK12Q9NYV4 1490 aaPredicted RBP19.53■□□□□ 0.72
LAMB1-206ENST00000468518 SHPRHQ149N8 1683 aa19.5■□□□□ 0.71
LAMB1-206ENST00000468518 SETBP1Q9Y6X0 1596 aa19.5■□□□□ 0.71
LAMB1-206ENST00000468518 CFAP65Q6ZU64 1925 aaKnown RBP19.5■□□□□ 0.71
LAMB1-206ENST00000468518 TRPM2O94759 1503 aa19.5■□□□□ 0.71
LAMB1-206ENST00000468518 CCDC144AA2RUR9 1427 aa19.5■□□□□ 0.71
LAMB1-206ENST00000468518 TMEM94Q12767 1356 aa19.49■□□□□ 0.71
LAMB1-206ENST00000468518 MROH1Q8NDA8 1641 aa19.49■□□□□ 0.71
LAMB1-206ENST00000468518 LMTK2Q8IWU2 1503 aa19.48■□□□□ 0.71
LAMB1-206ENST00000468518 NBPF8Q3BBV2 869 aa19.48■□□□□ 0.71
LAMB1-206ENST00000468518 ZNF772Q68DY9 489 aaPredicted RBP19.47■□□□□ 0.71
LAMB1-206ENST00000468518 E9PCH4 1651 aa19.46■□□□□ 0.71
LAMB1-206ENST00000468518 DHX29Q7Z478 1369 aaKnown RBP19.46■□□□□ 0.71
LAMB1-206ENST00000468518 HSPA5P11021 654 aaKnown RBP19.46■□□□□ 0.71
LAMB1-206ENST00000468518 ARHGAP23Q9P227 1491 aa19.46■□□□□ 0.71
LAMB1-206ENST00000468518 SLIT1O75093 1534 aa19.46■□□□□ 0.71
LAMB1-206ENST00000468518 SPHKAPQ2M3C7 1700 aa19.45■□□□□ 0.7
LAMB1-206ENST00000468518 CCER2I3L3R5 266 aa19.45■□□□□ 0.7
LAMB1-206ENST00000468518 TRPM1Q7Z4N2 1603 aa19.44■□□□□ 0.7
LAMB1-206ENST00000468518 ERVK-7P63135 1459 aa19.43■□□□□ 0.7
LAMB1-206ENST00000468518 WASHC2CQ9Y4E1 1318 aa19.43■□□□□ 0.7
LAMB1-206ENST00000468518 RGS12O14924 1447 aa19.42■□□□□ 0.7
LAMB1-206ENST00000468518 CEP152O94986 1710 aa19.42■□□□□ 0.7
LAMB1-206ENST00000468518 KIF3BO15066 747 aa19.42■□□□□ 0.7
LAMB1-206ENST00000468518 RXRBP28702 533 aa19.42■□□□□ 0.7
LAMB1-206ENST00000468518 GPRASP1Q5JY77 1395 aa19.42■□□□□ 0.7
LAMB1-206ENST00000468518 CCDC7Q96M83 1385 aa19.42■□□□□ 0.7
LAMB1-206ENST00000468518 PRAG1Q86YV5 1406 aa19.42■□□□□ 0.7
LAMB1-206ENST00000468518 LTKP29376 864 aa19.41■□□□□ 0.7
LAMB1-206ENST00000468518 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
LAMB1-206ENST00000468518 ABCC3O15438 1527 aa19.41■□□□□ 0.7
LAMB1-206ENST00000468518 NWD1Q149M9 1564 aa19.4■□□□□ 0.7
LAMB1-206ENST00000468518 MEX3CQ5U5Q3 659 aaKnown RBP19.4■□□□□ 0.7
LAMB1-206ENST00000468518 SPATA31A6Q5VVP1 1343 aa19.4■□□□□ 0.7
LAMB1-206ENST00000468518 WASHC2AQ641Q2 1341 aa19.4■□□□□ 0.7
LAMB1-206ENST00000468518 EFCAB6Q5THR3 1501 aa19.4■□□□□ 0.7
LAMB1-206ENST00000468518 KDM5AP29375 1690 aaKnown RBP19.4■□□□□ 0.7
LAMB1-206ENST00000468518 RBM33Q96EV2 1170 aaKnown RBP19.39■□□□□ 0.69
LAMB1-206ENST00000468518 KANK1Q14678 1352 aa19.39■□□□□ 0.69
LAMB1-206ENST00000468518 USP47Q96K76 1375 aa19.38■□□□□ 0.69
LAMB1-206ENST00000468518 STAC3Q96MF2 364 aa19.38■□□□□ 0.69
LAMB1-206ENST00000468518 AHDC1Q5TGY3 1603 aaPredicted RBP19.36■□□□□ 0.69
LAMB1-206ENST00000468518 NKTRP30414 1462 aaKnown RBP19.35■□□□□ 0.69
LAMB1-206ENST00000468518 EP400Q96L91 3159 aa19.35■□□□□ 0.69
LAMB1-206ENST00000468518 DIP2AQ14689 1571 aa19.35■□□□□ 0.69
LAMB1-206ENST00000468518 PIK3C2BO00750 1634 aa19.34■□□□□ 0.69
LAMB1-206ENST00000468518 ANP32CO43423 234 aa19.34■□□□□ 0.69
LAMB1-206ENST00000468518 TXNDC2Q86VQ3 553 aa19.33■□□□□ 0.68
LAMB1-206ENST00000468518 CLTCL1P53675 1640 aa19.33■□□□□ 0.68
LAMB1-206ENST00000468518 ROCK2O75116 1388 aaKnown RBP19.32■□□□□ 0.68
LAMB1-206ENST00000468518 KIAA1210Q9ULL0 1709 aa19.32■□□□□ 0.68
LAMB1-206ENST00000468518 SLAIN2Q9P270 581 aa19.31■□□□□ 0.68
LAMB1-206ENST00000468518 MSH6P52701 1360 aa19.31■□□□□ 0.68
LAMB1-206ENST00000468518 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
LAMB1-206ENST00000468518 LRP5O75197 1615 aa19.29■□□□□ 0.68
LAMB1-206ENST00000468518 HIRIP3Q9BW71 556 aaPredicted RBP19.29■□□□□ 0.68
LAMB1-206ENST00000468518 ZRANB1Q9UGI0 708 aa19.29■□□□□ 0.68
LAMB1-206ENST00000468518 KCNA6P17658 529 aa19.28■□□□□ 0.68
LAMB1-206ENST00000468518 CHD2O14647 1828 aaKnown RBP19.28■□□□□ 0.68
LAMB1-206ENST00000468518 AFF2P51816 1311 aa19.27■□□□□ 0.68
LAMB1-206ENST00000468518 KIF7Q2M1P5 1343 aa19.27■□□□□ 0.68
LAMB1-206ENST00000468518 MYOM2P54296 1465 aa19.27■□□□□ 0.67
LAMB1-206ENST00000468518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.26■□□□□ 0.671e-9■□□□□ 9.5
LAMB1-206ENST00000468518 IFT172Q9UG01 1749 aa19.25■□□□□ 0.67
LAMB1-206ENST00000468518 NUTM2BA6NNL0 878 aaPredicted RBP19.24■□□□□ 0.67
LAMB1-206ENST00000468518 NUTM2EB1AL46 878 aaPredicted RBP19.24■□□□□ 0.67
LAMB1-206ENST00000468518 NUTM2DQ5VT03 806 aaPredicted RBP19.24■□□□□ 0.67
LAMB1-206ENST00000468518 NUTM2AQ8IVF1 878 aaPredicted RBP19.24■□□□□ 0.67
LAMB1-206ENST00000468518 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.23■□□□□ 0.67
LAMB1-206ENST00000468518 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
LAMB1-206ENST00000468518 TMEM2Q9UHN6 1383 aa19.23■□□□□ 0.67
LAMB1-206ENST00000468518 DCAF11Q8TEB1 546 aa19.22■□□□□ 0.67
LAMB1-206ENST00000468518 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
LAMB1-206ENST00000468518 EID1Q9Y6B2 187 aa19.22■□□□□ 0.67
LAMB1-206ENST00000468518 KIF1BO60333 1816 aa19.22■□□□□ 0.67
LAMB1-206ENST00000468518 ADGRB3O60242 1522 aa19.21■□□□□ 0.67
LAMB1-206ENST00000468518 C11orf95C9JLR9 678 aaPredicted RBP19.21■□□□□ 0.67
LAMB1-206ENST00000468518 ARHGAP31Q2M1Z3 1444 aa19.21■□□□□ 0.67
LAMB1-206ENST00000468518 CARD11Q9BXL7 1154 aa19.21■□□□□ 0.67
LAMB1-206ENST00000468518 NRXN1Q9ULB1 1477 aa19.2■□□□□ 0.66
LAMB1-206ENST00000468518 RBM6P78332 1123 aaKnown RBP19.19■□□□□ 0.66
LAMB1-206ENST00000468518 SLC26A8Q96RN1 970 aa19.19■□□□□ 0.66
LAMB1-206ENST00000468518 NHSL1Q5SYE7 1610 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms