RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 FAM198AQ9UFP1 575 aa6.22□□□□□ -1.41
CDHR3-206ENST00000468477 TESPA1A2RU30 521 aaPredicted RBP6.21□□□□□ -1.42
CDHR3-206ENST00000468477 RGS20O76081 388 aa6.21□□□□□ -1.42
CDHR3-206ENST00000468477 TTC13Q8NBP0 860 aa6.21□□□□□ -1.42
CDHR3-206ENST00000468477 ITGBL1O95965 494 aaPredicted RBP6.2□□□□□ -1.42
CDHR3-206ENST00000468477 OATP04181 439 aa6.2□□□□□ -1.42
CDHR3-206ENST00000468477 DNAJB2P25686 324 aa6.2□□□□□ -1.42
CDHR3-206ENST00000468477 HIC1Q14526 733 aa6.2□□□□□ -1.42
CDHR3-206ENST00000468477 RSPH4AQ5TD94 716 aa6.2□□□□□ -1.42
CDHR3-206ENST00000468477 HRCP23327 699 aa6.19□□□□□ -1.42
CDHR3-206ENST00000468477 SWT1Q5T5J6 900 aaKnown RBP6.19□□□□□ -1.42
CDHR3-206ENST00000468477 A0A0G2JS52 829 aa6.18□□□□□ -1.42
CDHR3-206ENST00000468477 EYA1Q99502 592 aa6.18□□□□□ -1.42
CDHR3-206ENST00000468477 RBM26Q5T8P6 1007 aaKnown RBP6.17□□□□□ -1.42
CDHR3-206ENST00000468477 GPIHBP1Q8IV16 184 aa6.17□□□□□ -1.42
CDHR3-206ENST00000468477 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.16□□□□□ -1.42
CDHR3-206ENST00000468477 GNPATO15228 680 aa6.16□□□□□ -1.42
CDHR3-206ENST00000468477 KMT5BQ4FZB7 885 aa6.16□□□□□ -1.42
CDHR3-206ENST00000468477 IL21Q9HBE4 155 aa6.16□□□□□ -1.42
CDHR3-206ENST00000468477 ADGRG1Q9Y653 693 aa6.16□□□□□ -1.42
CDHR3-206ENST00000468477 C3orf80F5H4A9 247 aa6.15□□□□□ -1.42
CDHR3-206ENST00000468477 RCCD1A6NED2 376 aa6.14□□□□□ -1.43
CDHR3-206ENST00000468477 GGCXP38435 758 aa6.14□□□□□ -1.43
CDHR3-206ENST00000468477 MTRQ99707 1265 aa6.14□□□□□ -1.43
CDHR3-206ENST00000468477 TMEM134Q9H6X4 195 aa6.14□□□□□ -1.43
CDHR3-206ENST00000468477 PCDHB3Q9Y5E6 796 aa6.13□□□□□ -1.43
CDHR3-206ENST00000468477 APLP1P51693 650 aa6.12□□□□□ -1.43
CDHR3-206ENST00000468477 EIF5BO60841 1220 aaKnown RBP6.11□□□□□ -1.43
CDHR3-206ENST00000468477 FAM161AQ3B820 660 aa6.11□□□□□ -1.43
CDHR3-206ENST00000468477 TJAP1Q5JTD0 557 aa6.11□□□□□ -1.43
CDHR3-206ENST00000468477 METTL3Q86U44 580 aaKnown RBP6.11□□□□□ -1.43
CDHR3-206ENST00000468477 PXYLP1Q8TE99 480 aa6.11□□□□□ -1.43
CDHR3-206ENST00000468477 COPS2P61201 443 aa6.1□□□□□ -1.43
CDHR3-206ENST00000468477 SULF1Q8IWU6 871 aa6.1□□□□□ -1.43
CDHR3-206ENST00000468477 CFHP08603 1231 aa6.09□□□□□ -1.43
CDHR3-206ENST00000468477 RDH13Q8NBN7 331 aa6.09□□□□□ -1.43
CDHR3-206ENST00000468477 IRX2Q9BZI1 471 aaPredicted RBP6.09□□□□□ -1.43
CDHR3-206ENST00000468477 ZPR1O75312 459 aa6.08□□□□□ -1.44
CDHR3-206ENST00000468477 NR1I2O75469 434 aa6.08□□□□□ -1.44
CDHR3-206ENST00000468477 ACTN4O43707 911 aaKnown RBP6.07□□□□□ -1.44
CDHR3-206ENST00000468477 KRI1Q8N9T8 703 aaKnown RBP6.07□□□□□ -1.44
CDHR3-206ENST00000468477 DDX11L8A8MPP1 907 aa6.06□□□□□ -1.44
CDHR3-206ENST00000468477 MAP2K5Q13163 448 aa6.06□□□□□ -1.44
CDHR3-206ENST00000468477 TMUB1Q9BVT8 246 aa6.06□□□□□ -1.44
CDHR3-206ENST00000468477 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.06□□□□□ -1.44
CDHR3-206ENST00000468477 FECHP22830 423 aa6.05□□□□□ -1.44
CDHR3-206ENST00000468477 GRIPAP1Q4V328 841 aa6.05□□□□□ -1.44
CDHR3-206ENST00000468477 PPP1R18Q6NYC8 613 aa6.05□□□□□ -1.44
CDHR3-206ENST00000468477 ZNF516Q92618 1163 aa6.05□□□□□ -1.44
CDHR3-206ENST00000468477 MINK1Q8N4C8 1332 aaPredicted RBP6.04□□□□□ -1.44
CDHR3-206ENST00000468477 LOC105371045A0A1W2PR82 267 aa6.04□□□□□ -1.44
CDHR3-206ENST00000468477 GPR37O15354 613 aa6.04□□□□□ -1.44
CDHR3-206ENST00000468477 LAPTM4AQ15012 233 aa6.04□□□□□ -1.44
CDHR3-206ENST00000468477 BLOC1S3Q6QNY0 202 aa6.04□□□□□ -1.44
CDHR3-206ENST00000468477 CCDC9Q9Y3X0 531 aaKnown RBP6.04□□□□□ -1.44
CDHR3-206ENST00000468477 SLC10A3P09131 477 aa6.03□□□□□ -1.44
CDHR3-206ENST00000468477 BRPF1P55201 1214 aaPredicted RBP6.02□□□□□ -1.45
CDHR3-206ENST00000468477 PRKD2Q9BZL6 878 aa6.02□□□□□ -1.45
CDHR3-206ENST00000468477 V9GY48 417 aaPredicted RBP6.02□□□□□ -1.45
CDHR3-206ENST00000468477 IRF6O14896 467 aa6.01□□□□□ -1.45
CDHR3-206ENST00000468477 ATP6V1AP38606 617 aa6.01□□□□□ -1.45
CDHR3-206ENST00000468477 LMOD2Q6P5Q4 547 aa6.01□□□□□ -1.45
CDHR3-206ENST00000468477 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.01□□□□□ -1.45
CDHR3-206ENST00000468477 NKX2-3Q8TAU0 364 aa6.01□□□□□ -1.45
CDHR3-206ENST00000468477 ARID3AQ99856 593 aa6.01□□□□□ -1.45
CDHR3-206ENST00000468477 ZBTB7CA1YPR0 619 aa6□□□□□ -1.45
CDHR3-206ENST00000468477 ADH1BP00325 375 aa6□□□□□ -1.45
CDHR3-206ENST00000468477 CLCN1P35523 988 aa5.99□□□□□ -1.45
CDHR3-206ENST00000468477 GCGRP47871 477 aa5.99□□□□□ -1.45
CDHR3-206ENST00000468477 SCUBE3Q8IX30 993 aa5.99□□□□□ -1.45
CDHR3-206ENST00000468477 SLC6A16Q9GZN6 736 aa5.99□□□□□ -1.45
CDHR3-206ENST00000468477 SHROOM4Q9ULL8 1493 aa5.98□□□□□ -1.45
CDHR3-206ENST00000468477 TLL1O43897 1013 aa5.98□□□□□ -1.45
CDHR3-206ENST00000468477 FMNL1O95466 1100 aaPredicted RBP5.98□□□□□ -1.45
CDHR3-206ENST00000468477 FUT2Q10981 343 aa5.98□□□□□ -1.45
CDHR3-206ENST00000468477 PUS10Q3MIT2 529 aaKnown RBP5.98□□□□□ -1.45
CDHR3-206ENST00000468477 Q6ZNB5 142 aa5.98□□□□□ -1.45
CDHR3-206ENST00000468477 ANKLE1Q8NAG6 615 aa5.98□□□□□ -1.45
CDHR3-206ENST00000468477 NLRP7Q8WX94 980 aa5.98□□□□□ -1.45
CDHR3-206ENST00000468477 SPSB2Q99619 263 aa5.98□□□□□ -1.45
CDHR3-206ENST00000468477 MDM2Q00987 491 aaPredicted RBP5.97□□□□□ -1.45
CDHR3-206ENST00000468477 Q3C1V9 767 aa5.97□□□□□ -1.45
CDHR3-206ENST00000468477 CCDC102AQ96A19 550 aa5.97□□□□□ -1.45
CDHR3-206ENST00000468477 ZMYND15Q9H091 742 aa5.97□□□□□ -1.45
CDHR3-206ENST00000468477 GPCPD1Q9NPB8 672 aa5.97□□□□□ -1.45
CDHR3-206ENST00000468477 RNF223E7ERA6 249 aa5.96□□□□□ -1.46
CDHR3-206ENST00000468477 GFRA3O60609 400 aa5.96□□□□□ -1.46
CDHR3-206ENST00000468477 S1PR4O95977 384 aa5.96□□□□□ -1.46
CDHR3-206ENST00000468477 SLC19A1P41440 591 aa5.96□□□□□ -1.46
CDHR3-206ENST00000468477 USP46P62068 366 aa5.96□□□□□ -1.46
CDHR3-206ENST00000468477 PHOX2BQ99453 314 aa5.96□□□□□ -1.46
CDHR3-206ENST00000468477 RSPH6AQ9H0K4 717 aa5.96□□□□□ -1.46
CDHR3-206ENST00000468477 KDM4AO75164 1064 aa5.95□□□□□ -1.46
CDHR3-206ENST00000468477 NEUROD2Q15784 382 aa5.95□□□□□ -1.46
CDHR3-206ENST00000468477 MORN1Q5T089 497 aa5.95□□□□□ -1.46
CDHR3-206ENST00000468477 NUTM1Q86Y26 1132 aa5.95□□□□□ -1.46
CDHR3-206ENST00000468477 SALL2Q9Y467 1007 aaPredicted RBP5.95□□□□□ -1.46
CDHR3-206ENST00000468477 NRG2O14511 850 aaPredicted RBP5.94□□□□□ -1.46
CDHR3-206ENST00000468477 CD46P15529 392 aa5.94□□□□□ -1.46
CDHR3-206ENST00000468477 PDZRN3Q9UPQ7 1066 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms