RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 COL17A1Q9UMD9 1497 aaPredicted RBP14.05□□□□□ -0.16
MSH5-213ENST00000468136 SETBP1Q9Y6X0 1596 aa14.05□□□□□ -0.16
MSH5-213ENST00000468136 IFT172Q9UG01 1749 aa14.04□□□□□ -0.16
MSH5-213ENST00000468136 NBPF1Q3BBV0 1214 aa14.04□□□□□ -0.16
MSH5-213ENST00000468136 ESF1Q9H501 851 aaKnown RBP14.04□□□□□ -0.16
MSH5-213ENST00000468136 ERVK-7P63135 1459 aa14.03□□□□□ -0.16
MSH5-213ENST00000468136 PREX1Q8TCU6 1659 aa14.02□□□□□ -0.16
MSH5-213ENST00000468136 SYNMO15061 1565 aa14.02□□□□□ -0.16
MSH5-213ENST00000468136 UGGT1Q9NYU2 1555 aa14.01□□□□□ -0.17
MSH5-213ENST00000468136 PIK3C2GO75747 1445 aa14.01□□□□□ -0.17
MSH5-213ENST00000468136 SBNO2Q9Y2G9 1366 aa14.01□□□□□ -0.17
MSH5-213ENST00000468136 TESK2Q96S53 571 aa14.01□□□□□ -0.17
MSH5-213ENST00000468136 C14orf93Q9H972 538 aaKnown RBP14.01□□□□□ -0.17
MSH5-213ENST00000468136 IQGAP1P46940 1657 aa14.01□□□□□ -0.17
MSH5-213ENST00000468136 SPATA31D1Q6ZQQ2 1576 aa14□□□□□ -0.17
MSH5-213ENST00000468136 CHGAP10645 457 aaKnown RBP14□□□□□ -0.17
MSH5-213ENST00000468136 IDI1Q13907 227 aa14□□□□□ -0.17
MSH5-213ENST00000468136 PRKRIP1Q9H875 184 aaPredicted RBP14□□□□□ -0.17
MSH5-213ENST00000468136 PPLO60437 1756 aa14□□□□□ -0.17
MSH5-213ENST00000468136 SIGLEC1Q9BZZ2 1709 aa13.99□□□□□ -0.17
MSH5-213ENST00000468136 MROH2AA6NES4 1674 aa13.98□□□□□ -0.17
MSH5-213ENST00000468136 ADGRF5Q8IZF2 1346 aa13.98□□□□□ -0.17
MSH5-213ENST00000468136 HDGFP51858 240 aaKnown RBP13.98□□□□□ -0.17
MSH5-213ENST00000468136 NEXMIFQ5QGS0 1516 aa13.96□□□□□ -0.17
MSH5-213ENST00000468136 RALBP1Q15311 655 aa13.96□□□□□ -0.17
MSH5-213ENST00000468136 PUS7Q96PZ0 661 aaKnown RBP13.96□□□□□ -0.17
MSH5-213ENST00000468136 TMEM131LA2VDJ0 1609 aa13.95□□□□□ -0.18
MSH5-213ENST00000468136 CFAP70Q5T0N1 1121 aa13.95□□□□□ -0.18
MSH5-213ENST00000468136 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.95□□□□□ -0.18
MSH5-213ENST00000468136 YTHDC1Q96MU7 727 aaKnown RBP13.95□□□□□ -0.18
MSH5-213ENST00000468136 ZMYM3Q14202 1370 aa13.95□□□□□ -0.18
MSH5-213ENST00000468136 CLTCQ00610 1675 aaKnown RBP13.95□□□□□ -0.18
MSH5-213ENST00000468136 CFAP65Q6ZU64 1925 aaKnown RBP13.94□□□□□ -0.18
MSH5-213ENST00000468136 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
MSH5-213ENST00000468136 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
MSH5-213ENST00000468136 KDM5AP29375 1690 aaKnown RBP13.92□□□□□ -0.18
MSH5-213ENST00000468136 POLR3GLQ9BT43 218 aa13.92□□□□□ -0.18
MSH5-213ENST00000468136 DNAJC5Q9H3Z4 198 aa13.92□□□□□ -0.18
MSH5-213ENST00000468136 CENPJQ9HC77 1338 aaPredicted RBP13.91□□□□□ -0.18
MSH5-213ENST00000468136 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
MSH5-213ENST00000468136 ADGRB1O14514 1584 aa13.91□□□□□ -0.18
MSH5-213ENST00000468136 DISP3Q9P2K9 1392 aa13.9□□□□□ -0.18
MSH5-213ENST00000468136 TNRQ92752 1358 aa13.89□□□□□ -0.19
MSH5-213ENST00000468136 NPC1L1Q9UHC9 1359 aa13.89□□□□□ -0.19
MSH5-213ENST00000468136 FBXO31Q5XUX0 539 aaPredicted RBP13.89□□□□□ -0.19
MSH5-213ENST00000468136 A2ML1A8K2U0 1454 aa13.88□□□□□ -0.19
MSH5-213ENST00000468136 NLRP1Q9C000 1473 aa13.88□□□□□ -0.19
MSH5-213ENST00000468136 MLECQ14165 292 aa13.88□□□□□ -0.19
MSH5-213ENST00000468136 BRD4O60885 1362 aaPredicted RBP13.87□□□□□ -0.19
MSH5-213ENST00000468136 PER1O15534 1290 aaPredicted RBP13.87□□□□□ -0.19
MSH5-213ENST00000468136 MYBBP1AQ9BQG0 1328 aaKnown RBP13.87□□□□□ -0.19
MSH5-213ENST00000468136 MRS2Q9HD23 443 aa13.86□□□□□ -0.19
MSH5-213ENST00000468136 RIMS2Q9UQ26 1411 aa13.85□□□□□ -0.19
MSH5-213ENST00000468136 PLPPR3Q6T4P5 718 aa13.85□□□□□ -0.19
MSH5-213ENST00000468136 PARD3Q8TEW0 1356 aa13.84□□□□□ -0.19
MSH5-213ENST00000468136 NINLQ9Y2I6 1382 aa13.84□□□□□ -0.19
MSH5-213ENST00000468136 PANK3Q9H999 370 aa13.84□□□□□ -0.19
MSH5-213ENST00000468136 KNSTRNQ9Y448 316 aa13.84□□□□□ -0.19
MSH5-213ENST00000468136 INSRP06213 1382 aa13.83□□□□□ -0.19
MSH5-213ENST00000468136 NLRP13Q86W25 1043 aa13.83□□□□□ -0.2
MSH5-213ENST00000468136 EVC2Q86UK5 1308 aa13.83□□□□□ -0.2
MSH5-213ENST00000468136 DLC1Q96QB1 1528 aa13.82□□□□□ -0.2
MSH5-213ENST00000468136 SIRT1Q96EB6 747 aa13.82□□□□□ -0.2
MSH5-213ENST00000468136 TMC1Q8TDI8 760 aa13.81□□□□□ -0.2
MSH5-213ENST00000468136 TRAK1Q9UPV9 953 aa13.81□□□□□ -0.2
MSH5-213ENST00000468136 YTHDC2Q9H6S0 1430 aaKnown RBP13.81□□□□□ -0.2
MSH5-213ENST00000468136 ALKQ9UM73 1620 aa13.8□□□□□ -0.2
MSH5-213ENST00000468136 MYO5BQ9ULV0 1848 aa13.8□□□□□ -0.2
MSH5-213ENST00000468136 LRPPRCP42704 1394 aaKnown RBP13.8□□□□□ -0.2
MSH5-213ENST00000468136 ABCC11Q96J66 1382 aa13.79□□□□□ -0.2
MSH5-213ENST00000468136 TMEM2Q9UHN6 1383 aa13.79□□□□□ -0.2
MSH5-213ENST00000468136 ASXL1Q8IXJ9 1541 aa13.78□□□□□ -0.2
MSH5-213ENST00000468136 QRICH2Q9H0J4 1663 aa13.78□□□□□ -0.2
MSH5-213ENST00000468136 ARHGEF28Q8N1W1 1705 aaKnown RBP13.78□□□□□ -0.2
MSH5-213ENST00000468136 TMEM132EQ6IEE7 984 aa13.77□□□□□ -0.21
MSH5-213ENST00000468136 ATAD2Q6PL18 1390 aa13.77□□□□□ -0.21
MSH5-213ENST00000468136 THEMISQ8N1K5 641 aaPredicted RBP13.76□□□□□ -0.21
MSH5-213ENST00000468136 EID1Q9Y6B2 187 aa13.76□□□□□ -0.21
MSH5-213ENST00000468136 FER1L4A9Z1Z3 1794 aa13.76□□□□□ -0.21
MSH5-213ENST00000468136 PLEKHG1Q9ULL1 1385 aa13.75□□□□□ -0.21
MSH5-213ENST00000468136 ZBED9Q6R2W3 1325 aa13.75□□□□□ -0.21
MSH5-213ENST00000468136 HNRNPUQ00839 825 aaKnown RBP eCLIP13.75□□□□□ -0.21
MSH5-213ENST00000468136 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
MSH5-213ENST00000468136 PNISRQ8TF01 805 aaKnown RBP13.75□□□□□ -0.21
MSH5-213ENST00000468136 POGKQ9P215 609 aa13.75□□□□□ -0.21
MSH5-213ENST00000468136 PTPRMP28827 1452 aa13.74□□□□□ -0.21
MSH5-213ENST00000468136 TECPR2O15040 1411 aa13.74□□□□□ -0.21
MSH5-213ENST00000468136 FAM135BQ49AJ0 1406 aa13.74□□□□□ -0.21
MSH5-213ENST00000468136 NSD2O96028 1365 aa13.74□□□□□ -0.21
MSH5-213ENST00000468136 UBR1Q8IWV7 1749 aa13.74□□□□□ -0.21
MSH5-213ENST00000468136 NUTM2DQ5VT03 806 aaPredicted RBP13.74□□□□□ -0.21
MSH5-213ENST00000468136 SLIT1O75093 1534 aa13.74□□□□□ -0.21
MSH5-213ENST00000468136 MYOM1P52179 1685 aa13.73□□□□□ -0.21
MSH5-213ENST00000468136 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
MSH5-213ENST00000468136 ARHGAP23Q9P227 1491 aa13.73□□□□□ -0.21
MSH5-213ENST00000468136 C3P01024 1663 aa13.72□□□□□ -0.21
MSH5-213ENST00000468136 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
MSH5-213ENST00000468136 FAM9BQ8IZU0 186 aa13.72□□□□□ -0.21
MSH5-213ENST00000468136 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.21
MSH5-213ENST00000468136 USP32Q8NFA0 1604 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms