RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 TET3O43151 1660 aa19.19■□□□□ 0.66
VPS26A-204ENST00000467852 LRP5O75197 1615 aa19.18■□□□□ 0.66
VPS26A-204ENST00000467852 CCDC141Q6ZP82 1450 aa19.17■□□□□ 0.66
VPS26A-204ENST00000467852 CADPS2Q86UW7 1296 aa19.17■□□□□ 0.66
VPS26A-204ENST00000467852 DIP2AQ14689 1571 aa19.16■□□□□ 0.66
VPS26A-204ENST00000467852 ATF3P18847 181 aa19.16■□□□□ 0.66
VPS26A-204ENST00000467852 EP400Q96L91 3159 aa19.16■□□□□ 0.66
VPS26A-204ENST00000467852 FYCO1Q9BQS8 1478 aa19.15■□□□□ 0.66
VPS26A-204ENST00000467852 PIK3C2BO00750 1634 aa19.14■□□□□ 0.66
VPS26A-204ENST00000467852 CEP152O94986 1710 aa19.14■□□□□ 0.66
VPS26A-204ENST00000467852 MAPK8IP2Q13387 824 aaPredicted RBP19.14■□□□□ 0.65
VPS26A-204ENST00000467852 NCOA3Q9Y6Q9 1424 aa19.14■□□□□ 0.65
VPS26A-204ENST00000467852 CAMSAP2Q08AD1 1489 aa19.14■□□□□ 0.65
VPS26A-204ENST00000467852 TSPY4P0CV99 314 aa19.13■□□□□ 0.65
VPS26A-204ENST00000467852 TSPY10P0CW01 314 aa19.13■□□□□ 0.65
VPS26A-204ENST00000467852 CHD2O14647 1828 aaKnown RBP19.12■□□□□ 0.65
VPS26A-204ENST00000467852 KCNA4P22459 653 aa19.12■□□□□ 0.65
VPS26A-204ENST00000467852 MTUS2Q5JR59 1369 aa19.11■□□□□ 0.65
VPS26A-204ENST00000467852 IFFO2Q5TF58 517 aa19.11■□□□□ 0.65
VPS26A-204ENST00000467852 LRRC59Q96AG4 307 aaKnown RBP19.11■□□□□ 0.65
VPS26A-204ENST00000467852 C19orf44Q9H6X5 657 aa19.11■□□□□ 0.65
VPS26A-204ENST00000467852 EFCAB6Q5THR3 1501 aa19.1■□□□□ 0.65
VPS26A-204ENST00000467852 TRPC5Q9UL62 973 aaPredicted RBP19.1■□□□□ 0.65
VPS26A-204ENST00000467852 SETD5Q9C0A6 1442 aa19.09■□□□□ 0.65
VPS26A-204ENST00000467852 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.09■□□□□ 0.65
VPS26A-204ENST00000467852 BRINP3Q76B58 766 aa19.09■□□□□ 0.65
VPS26A-204ENST00000467852 USP21Q9UK80 565 aa19.08■□□□□ 0.64
VPS26A-204ENST00000467852 YY1P25490 414 aa19.07■□□□□ 0.64
VPS26A-204ENST00000467852 EIF2AK4Q9P2K8 1649 aaKnown RBP19.06■□□□□ 0.64
VPS26A-204ENST00000467852 ARHGAP31Q2M1Z3 1444 aa19.06■□□□□ 0.64
VPS26A-204ENST00000467852 ADAMTS2O95450 1211 aa19.05■□□□□ 0.64
VPS26A-204ENST00000467852 IDI1Q13907 227 aa19.04■□□□□ 0.64
VPS26A-204ENST00000467852 MAST1Q9Y2H9 1570 aa19.03■□□□□ 0.64
VPS26A-204ENST00000467852 MROH1Q8NDA8 1641 aa19.03■□□□□ 0.64
VPS26A-204ENST00000467852 BLMP54132 1417 aaPredicted RBP19.01■□□□□ 0.63
VPS26A-204ENST00000467852 SF3B2Q13435 895 aaKnown RBP19.01■□□□□ 0.63
VPS26A-204ENST00000467852 PNPLA6Q8IY17 1366 aa19■□□□□ 0.63
VPS26A-204ENST00000467852 ASXL1Q8IXJ9 1541 aa18.99■□□□□ 0.63
VPS26A-204ENST00000467852 DEFB132Q7Z7B7 95 aa18.98■□□□□ 0.63
VPS26A-204ENST00000467852 NHSL1Q5SYE7 1610 aa18.98■□□□□ 0.63
VPS26A-204ENST00000467852 ARHGEF5Q12774 1597 aa18.98■□□□□ 0.63
VPS26A-204ENST00000467852 HRCP23327 699 aa18.97■□□□□ 0.63
VPS26A-204ENST00000467852 HDGFP51858 240 aaKnown RBP18.97■□□□□ 0.63
VPS26A-204ENST00000467852 PPP1R15AO75807 674 aaPredicted RBP18.96■□□□□ 0.63
VPS26A-204ENST00000467852 FNBP4Q8N3X1 1017 aaPredicted RBP18.96■□□□□ 0.63
VPS26A-204ENST00000467852 TBX22Q9Y458 520 aa18.96■□□□□ 0.63
VPS26A-204ENST00000467852 ATRNO75882 1429 aa18.96■□□□□ 0.63
VPS26A-204ENST00000467852 PLEKHG1Q9ULL1 1385 aa18.95■□□□□ 0.62
VPS26A-204ENST00000467852 PSDA5PKW4 1024 aaPredicted RBP18.95■□□□□ 0.62
VPS26A-204ENST00000467852 CEP162Q5TB80 1403 aa18.93■□□□□ 0.62
VPS26A-204ENST00000467852 EHBP1L1Q8N3D4 1523 aa18.93■□□□□ 0.62
VPS26A-204ENST00000467852 ADGRB3O60242 1522 aa18.92■□□□□ 0.62
VPS26A-204ENST00000467852 DCCP43146 1447 aa18.91■□□□□ 0.62
VPS26A-204ENST00000467852 DDX17Q92841 729 aaKnown RBP18.9■□□□□ 0.62
VPS26A-204ENST00000467852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.62
VPS26A-204ENST00000467852 PTCH1Q13635 1447 aa18.89■□□□□ 0.61
VPS26A-204ENST00000467852 GJD4Q96KN9 370 aaPredicted RBP18.88■□□□□ 0.61
VPS26A-204ENST00000467852 SLC52A1Q9NWF4 448 aa18.88■□□□□ 0.61
VPS26A-204ENST00000467852 KANK1Q14678 1352 aa18.87■□□□□ 0.61
VPS26A-204ENST00000467852 PIK3R4Q99570 1358 aa18.87■□□□□ 0.61
VPS26A-204ENST00000467852 DUOX2Q9NRD8 1548 aa18.87■□□□□ 0.61
VPS26A-204ENST00000467852 MST1RQ04912 1400 aa18.86■□□□□ 0.61
VPS26A-204ENST00000467852 ZFYVE9O95405 1425 aa18.85■□□□□ 0.61
VPS26A-204ENST00000467852 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
VPS26A-204ENST00000467852 BCL9LQ86UU0 1499 aa18.84■□□□□ 0.61
VPS26A-204ENST00000467852 RIMS2Q9UQ26 1411 aa18.83■□□□□ 0.61
VPS26A-204ENST00000467852 UNC13BO14795 1591 aa18.82■□□□□ 0.6
VPS26A-204ENST00000467852 SENP3-EIF4A1A0A087X0R7 540 aa18.82■□□□□ 0.6
VPS26A-204ENST00000467852 DCAF8L1A6NGE4 600 aa18.82■□□□□ 0.6
VPS26A-204ENST00000467852 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.82■□□□□ 0.6
VPS26A-204ENST00000467852 MYO5BQ9ULV0 1848 aa18.81■□□□□ 0.6
VPS26A-204ENST00000467852 BAG6P46379 1132 aa18.81■□□□□ 0.6
VPS26A-204ENST00000467852 NOS1P29475 1434 aa18.8■□□□□ 0.6
VPS26A-204ENST00000467852 BRWD3Q6RI45 1802 aa18.79■□□□□ 0.6
VPS26A-204ENST00000467852 ADAMTS13Q76LX8 1427 aa18.78■□□□□ 0.6
VPS26A-204ENST00000467852 SPHKAPQ2M3C7 1700 aa18.77■□□□□ 0.6
VPS26A-204ENST00000467852 ERBINQ96RT1 1412 aa18.77■□□□□ 0.6
VPS26A-204ENST00000467852 R3HDM1Q15032 1099 aaKnown RBP18.76■□□□□ 0.59
VPS26A-204ENST00000467852 TRPM2O94759 1503 aa18.75■□□□□ 0.59
VPS26A-204ENST00000467852 SOS2Q07890 1332 aaPredicted RBP18.74■□□□□ 0.59
VPS26A-204ENST00000467852 LMTK2Q8IWU2 1503 aa18.74■□□□□ 0.59
VPS26A-204ENST00000467852 KIF15Q9NS87 1388 aa18.74■□□□□ 0.59
VPS26A-204ENST00000467852 GCC2Q8IWJ2 1684 aa18.73■□□□□ 0.59
VPS26A-204ENST00000467852 MARF1Q9Y4F3 1742 aaKnown RBP18.73■□□□□ 0.59
VPS26A-204ENST00000467852 PTPRUQ92729 1446 aa18.73■□□□□ 0.59
VPS26A-204ENST00000467852 SEPT12Q8IYM1 358 aa18.72■□□□□ 0.59
VPS26A-204ENST00000467852 RRP7BPQ9NSQ0 103 aa18.72■□□□□ 0.59
VPS26A-204ENST00000467852 RALGAPBQ86X10 1494 aa18.71■□□□□ 0.59
VPS26A-204ENST00000467852 COL22A1Q8NFW1 1626 aaPredicted RBP18.71■□□□□ 0.59
VPS26A-204ENST00000467852 CHGAP10645 457 aaKnown RBP18.71■□□□□ 0.59
VPS26A-204ENST00000467852 UNC5CLQ8IV45 518 aa18.71■□□□□ 0.59
VPS26A-204ENST00000467852 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.71■□□□□ 0.59
VPS26A-204ENST00000467852 LAMC1P11047 1609 aa18.71■□□□□ 0.58
VPS26A-204ENST00000467852 GLI3P10071 1580 aa18.7■□□□□ 0.58
VPS26A-204ENST00000467852 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
VPS26A-204ENST00000467852 KRT27Q7Z3Y8 459 aa18.69■□□□□ 0.58
VPS26A-204ENST00000467852 TMEM131LA2VDJ0 1609 aa18.69■□□□□ 0.58
VPS26A-204ENST00000467852 RPRD2Q5VT52 1461 aaKnown RBP18.68■□□□□ 0.58
VPS26A-204ENST00000467852 C1orf167Q5SNV9 1468 aa18.67■□□□□ 0.58
VPS26A-204ENST00000467852 EN1Q05925 392 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms