RNA–Protein interactions for RNA: ENST00000467749.1

C4A-248, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-248ENST00000467749 KIF15Q9NS87 1388 aa12.6□□□□□ -0.39
C4A-248ENST00000467749 IDI1Q13907 227 aa12.6□□□□□ -0.39
C4A-248ENST00000467749 KANK1Q14678 1352 aa12.59□□□□□ -0.39
C4A-248ENST00000467749 LMTK2Q8IWU2 1503 aa12.59□□□□□ -0.39
C4A-248ENST00000467749 RXRBP28702 533 aa12.59□□□□□ -0.39
C4A-248ENST00000467749 MYO5BQ9ULV0 1848 aa12.58□□□□□ -0.4
C4A-248ENST00000467749 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.58□□□□□ -0.4
C4A-248ENST00000467749 NCOA3Q9Y6Q9 1424 aa12.58□□□□□ -0.4
C4A-248ENST00000467749 BCANQ96GW7 911 aa12.57□□□□□ -0.4
C4A-248ENST00000467749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.57□□□□□ -0.4
C4A-248ENST00000467749 NOS1P29475 1434 aa12.56□□□□□ -0.4
C4A-248ENST00000467749 DIP2AQ14689 1571 aa12.56□□□□□ -0.4
C4A-248ENST00000467749 GCC2Q8IWJ2 1684 aa12.55□□□□□ -0.4
C4A-248ENST00000467749 PLEKHG1Q9ULL1 1385 aa12.55□□□□□ -0.4
C4A-248ENST00000467749 ZFYVE9O95405 1425 aa12.54□□□□□ -0.4
C4A-248ENST00000467749 RRP7BPQ9NSQ0 103 aa12.54□□□□□ -0.4
C4A-248ENST00000467749 SLC52A1Q9NWF4 448 aa12.54□□□□□ -0.4
C4A-248ENST00000467749 C14orf37Q86TY3 774 aa12.53□□□□□ -0.4
C4A-248ENST00000467749 CADPS2Q86UW7 1296 aa12.53□□□□□ -0.4
C4A-248ENST00000467749 ABCC5O15440 1437 aa12.53□□□□□ -0.4
C4A-248ENST00000467749 PTPN23Q9H3S7 1636 aa12.51□□□□□ -0.41
C4A-248ENST00000467749 PPP1R15AO75807 674 aaPredicted RBP12.51□□□□□ -0.41
C4A-248ENST00000467749 ATF3P18847 181 aa12.51□□□□□ -0.41
C4A-248ENST00000467749 HDGFP51858 240 aaKnown RBP12.51□□□□□ -0.41
C4A-248ENST00000467749 C19orf44Q9H6X5 657 aa12.51□□□□□ -0.41
C4A-248ENST00000467749 AFF2P51816 1311 aa12.51□□□□□ -0.41
C4A-248ENST00000467749 RPRD2Q5VT52 1461 aaKnown RBP12.51□□□□□ -0.41
C4A-248ENST00000467749 TMEM131LA2VDJ0 1609 aa12.51□□□□□ -0.41
C4A-248ENST00000467749 NUTM2BA6NNL0 878 aaPredicted RBP12.5□□□□□ -0.41
C4A-248ENST00000467749 NUTM2EB1AL46 878 aaPredicted RBP12.5□□□□□ -0.41
C4A-248ENST00000467749 NUTM2AQ8IVF1 878 aaPredicted RBP12.5□□□□□ -0.41
C4A-248ENST00000467749 TBX22Q9Y458 520 aa12.5□□□□□ -0.41
C4A-248ENST00000467749 RGS12O14924 1447 aa12.5□□□□□ -0.41
C4A-248ENST00000467749 DAPK1P53355 1430 aa12.5□□□□□ -0.41
C4A-248ENST00000467749 RIMS2Q9UQ26 1411 aa12.5□□□□□ -0.41
C4A-248ENST00000467749 NHSL1Q5SYE7 1610 aa12.5□□□□□ -0.41
C4A-248ENST00000467749 VPS8Q8N3P4 1428 aa12.49□□□□□ -0.41
C4A-248ENST00000467749 ASXL1Q8IXJ9 1541 aa12.48□□□□□ -0.41
C4A-248ENST00000467749 SETD5Q9C0A6 1442 aa12.48□□□□□ -0.41
C4A-248ENST00000467749 PIK3R4Q99570 1358 aa12.48□□□□□ -0.41
C4A-248ENST00000467749 BRINP3Q76B58 766 aa12.48□□□□□ -0.41
C4A-248ENST00000467749 DCCP43146 1447 aa12.47□□□□□ -0.41
C4A-248ENST00000467749 ADAMTS13Q76LX8 1427 aa12.47□□□□□ -0.41
C4A-248ENST00000467749 ANKRD30AQ9BXX3 1397 aa12.47□□□□□ -0.41
C4A-248ENST00000467749 RBM6P78332 1123 aaKnown RBP12.47□□□□□ -0.41
C4A-248ENST00000467749 KANK4Q5T7N3 995 aaPredicted RBP12.47□□□□□ -0.41
C4A-248ENST00000467749 TRPM2O94759 1503 aa12.47□□□□□ -0.41
C4A-248ENST00000467749 FOXD1Q16676 465 aa12.45□□□□□ -0.42
C4A-248ENST00000467749 NUTM2DQ5VT03 806 aaPredicted RBP12.45□□□□□ -0.42
C4A-248ENST00000467749 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.45□□□□□ -0.42
C4A-248ENST00000467749 QTRT2Q9H974 415 aaKnown RBP12.45□□□□□ -0.42
C4A-248ENST00000467749 ATAD2Q6PL18 1390 aa12.44□□□□□ -0.42
C4A-248ENST00000467749 SRCAPQ6ZRS2 3230 aa12.43□□□□□ -0.42
C4A-248ENST00000467749 LRRC59Q96AG4 307 aaKnown RBP12.43□□□□□ -0.42
C4A-248ENST00000467749 C8orf37Q96NL8 207 aa12.43□□□□□ -0.42
C4A-248ENST00000467749 XRN1Q8IZH2 1706 aaKnown RBP12.42□□□□□ -0.42
C4A-248ENST00000467749 NGLY1Q96IV0 654 aa12.42□□□□□ -0.42
C4A-248ENST00000467749 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
C4A-248ENST00000467749 MST1RQ04912 1400 aa12.42□□□□□ -0.42
C4A-248ENST00000467749 UNC13BO14795 1591 aa12.42□□□□□ -0.42
C4A-248ENST00000467749 PNPLA6Q8IY17 1366 aa12.42□□□□□ -0.42
C4A-248ENST00000467749 CHIC2Q9UKJ5 165 aa12.41□□□□□ -0.42
C4A-248ENST00000467749 AMOTL2Q9Y2J4 779 aa12.41□□□□□ -0.42
C4A-248ENST00000467749 ADGRL2O95490 1459 aa12.4□□□□□ -0.42
C4A-248ENST00000467749 PTPRUQ92729 1446 aa12.4□□□□□ -0.42
C4A-248ENST00000467749 E9PCH4 1651 aa12.4□□□□□ -0.42
C4A-248ENST00000467749 SETBP1Q9Y6X0 1596 aa12.39□□□□□ -0.43
C4A-248ENST00000467749 CHGAP10645 457 aaKnown RBP12.39□□□□□ -0.43
C4A-248ENST00000467749 LAMC1P11047 1609 aa12.38□□□□□ -0.43
C4A-248ENST00000467749 NRXN3Q9Y4C0 1643 aa12.38□□□□□ -0.43
C4A-248ENST00000467749 NALCNQ8IZF0 1738 aa12.38□□□□□ -0.43
C4A-248ENST00000467749 ANKRD50Q9ULJ7 1429 aa12.37□□□□□ -0.43
C4A-248ENST00000467749 IQGAP3Q86VI3 1631 aa12.36□□□□□ -0.43
C4A-248ENST00000467749 ADGRL3Q9HAR2 1447 aa12.36□□□□□ -0.43
C4A-248ENST00000467749 ADAMTS2O95450 1211 aa12.35□□□□□ -0.43
C4A-248ENST00000467749 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
C4A-248ENST00000467749 USP21Q9UK80 565 aa12.35□□□□□ -0.43
C4A-248ENST00000467749 TRPC5Q9UL62 973 aaPredicted RBP12.35□□□□□ -0.43
C4A-248ENST00000467749 DDX17Q92841 729 aaKnown RBP12.34□□□□□ -0.43
C4A-248ENST00000467749 MARF1Q9Y4F3 1742 aaKnown RBP12.34□□□□□ -0.43
C4A-248ENST00000467749 COL22A1Q8NFW1 1626 aaPredicted RBP12.33□□□□□ -0.43
C4A-248ENST00000467749 ATRNO75882 1429 aa12.33□□□□□ -0.44
C4A-248ENST00000467749 PTCH1Q13635 1447 aa12.33□□□□□ -0.44
C4A-248ENST00000467749 EP400Q96L91 3159 aa12.32□□□□□ -0.44
C4A-248ENST00000467749 FNBP4Q8N3X1 1017 aaPredicted RBP12.32□□□□□ -0.44
C4A-248ENST00000467749 LRP5O75197 1615 aa12.31□□□□□ -0.44
C4A-248ENST00000467749 C1orf167Q5SNV9 1468 aa12.31□□□□□ -0.44
C4A-248ENST00000467749 APLP2Q06481 763 aa12.3□□□□□ -0.44
C4A-248ENST00000467749 METP08581 1390 aa12.3□□□□□ -0.44
C4A-248ENST00000467749 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.29□□□□□ -0.44
C4A-248ENST00000467749 SOS2Q07890 1332 aaPredicted RBP12.29□□□□□ -0.44
C4A-248ENST00000467749 SPHKAPQ2M3C7 1700 aa12.28□□□□□ -0.44
C4A-248ENST00000467749 BLMP54132 1417 aaPredicted RBP12.27□□□□□ -0.45
C4A-248ENST00000467749 BCL9LQ86UU0 1499 aa12.27□□□□□ -0.45
C4A-248ENST00000467749 MYOM2P54296 1465 aa12.26□□□□□ -0.45
C4A-248ENST00000467749 BRWD3Q6RI45 1802 aa12.25□□□□□ -0.45
C4A-248ENST00000467749 FAM50AQ14320 339 aaKnown RBP12.25□□□□□ -0.45
C4A-248ENST00000467749 NEXMIFQ5QGS0 1516 aa12.24□□□□□ -0.45
C4A-248ENST00000467749 GJD4Q96KN9 370 aaPredicted RBP12.24□□□□□ -0.45
C4A-248ENST00000467749 ORAI2Q96SN7 254 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms