RNA–Protein interactions for RNA: ENST00000467677.1

LINC01393-204, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 2

Gene LINC01393, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-204ENST00000467677 FECHP22830 423 aa12.82□□□□□ -0.36
LINC01393-204ENST00000467677 PXYLP1Q8TE99 480 aa12.82□□□□□ -0.36
LINC01393-204ENST00000467677 GNPATO15228 680 aa12.81□□□□□ -0.36
LINC01393-204ENST00000467677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.79□□□□□ -0.36
LINC01393-204ENST00000467677 OATP04181 439 aa12.79□□□□□ -0.36
LINC01393-204ENST00000467677 COPS2P61201 443 aa12.79□□□□□ -0.36
LINC01393-204ENST00000467677 METTL3Q86U44 580 aaKnown RBP12.78□□□□□ -0.36
LINC01393-204ENST00000467677 PRR14Q9BWN1 585 aa12.77□□□□□ -0.37
LINC01393-204ENST00000467677 NKX2-3Q8TAU0 364 aa12.75□□□□□ -0.37
LINC01393-204ENST00000467677 PCDHB3Q9Y5E6 796 aa12.75□□□□□ -0.37
LINC01393-204ENST00000467677 SLC10A3P09131 477 aa12.74□□□□□ -0.37
LINC01393-204ENST00000467677 PPP1R18Q6NYC8 613 aa12.74□□□□□ -0.37
LINC01393-204ENST00000467677 GPIHBP1Q8IV16 184 aa12.74□□□□□ -0.37
LINC01393-204ENST00000467677 IRX2Q9BZI1 471 aaPredicted RBP12.74□□□□□ -0.37
LINC01393-204ENST00000467677 CFHP08603 1231 aa12.73□□□□□ -0.37
LINC01393-204ENST00000467677 BLOC1S3Q6QNY0 202 aa12.72□□□□□ -0.37
LINC01393-204ENST00000467677 ZPR1O75312 459 aa12.71□□□□□ -0.37
LINC01393-204ENST00000467677 KMT5BQ4FZB7 885 aa12.71□□□□□ -0.37
LINC01393-204ENST00000467677 ACTN4O43707 911 aaKnown RBP12.7□□□□□ -0.38
LINC01393-204ENST00000467677 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.69□□□□□ -0.38
LINC01393-204ENST00000467677 NLRP7Q8WX94 980 aa12.68□□□□□ -0.38
LINC01393-204ENST00000467677 PHOX2BQ99453 314 aa12.66□□□□□ -0.38
LINC01393-204ENST00000467677 TLL1O43897 1013 aa12.65□□□□□ -0.38
LINC01393-204ENST00000467677 PRKD2Q9BZL6 878 aa12.64□□□□□ -0.39
LINC01393-204ENST00000467677 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
LINC01393-204ENST00000467677 TULP1O00294 542 aaPredicted RBP12.62□□□□□ -0.39
LINC01393-204ENST00000467677 GGCXP38435 758 aa12.61□□□□□ -0.39
LINC01393-204ENST00000467677 RSPH4AQ5TD94 716 aa12.6□□□□□ -0.39
LINC01393-204ENST00000467677 DDX11L8A8MPP1 907 aa12.59□□□□□ -0.39
LINC01393-204ENST00000467677 RDH13Q8NBN7 331 aa12.59□□□□□ -0.39
LINC01393-204ENST00000467677 TMUB1Q9BVT8 246 aa12.59□□□□□ -0.39
LINC01393-204ENST00000467677 V9GY48 417 aaPredicted RBP12.59□□□□□ -0.39
LINC01393-204ENST00000467677 MAP2K5Q13163 448 aa12.58□□□□□ -0.4
LINC01393-204ENST00000467677 NR1I2O75469 434 aa12.57□□□□□ -0.4
LINC01393-204ENST00000467677 PUS10Q3MIT2 529 aaKnown RBP12.57□□□□□ -0.4
LINC01393-204ENST00000467677 RNF223E7ERA6 249 aa12.56□□□□□ -0.4
LINC01393-204ENST00000467677 ADH1BP00325 375 aa12.54□□□□□ -0.4
LINC01393-204ENST00000467677 SULF1Q8IWU6 871 aa12.54□□□□□ -0.4
LINC01393-204ENST00000467677 SCUBE3Q8IX30 993 aa12.54□□□□□ -0.4
LINC01393-204ENST00000467677 IRF6O14896 467 aa12.53□□□□□ -0.4
LINC01393-204ENST00000467677 S1PR4O95977 384 aa12.53□□□□□ -0.4
LINC01393-204ENST00000467677 GCGRP47871 477 aa12.52□□□□□ -0.41
LINC01393-204ENST00000467677 FUT2Q10981 343 aa12.52□□□□□ -0.41
LINC01393-204ENST00000467677 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC01393-204ENST00000467677 PPEF1O14829 653 aaPredicted RBP12.5□□□□□ -0.41
LINC01393-204ENST00000467677 GFRA3O60609 400 aa12.5□□□□□ -0.41
LINC01393-204ENST00000467677 MORN1Q5T089 497 aa12.5□□□□□ -0.41
LINC01393-204ENST00000467677 Q6ZNB5 142 aa12.5□□□□□ -0.41
LINC01393-204ENST00000467677 EMID1Q96A84 441 aaPredicted RBP12.5□□□□□ -0.41
LINC01393-204ENST00000467677 MINK1Q8N4C8 1332 aaPredicted RBP12.49□□□□□ -0.41
LINC01393-204ENST00000467677 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
LINC01393-204ENST00000467677 ANKLE1Q8NAG6 615 aa12.48□□□□□ -0.41
LINC01393-204ENST00000467677 CCDC102AQ96A19 550 aa12.48□□□□□ -0.41
LINC01393-204ENST00000467677 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
LINC01393-204ENST00000467677 SPSB2Q99619 263 aa12.47□□□□□ -0.41
LINC01393-204ENST00000467677 SLC6A16Q9GZN6 736 aa12.47□□□□□ -0.41
LINC01393-204ENST00000467677 CD46P15529 392 aa12.45□□□□□ -0.42
LINC01393-204ENST00000467677 SLC19A1P41440 591 aa12.45□□□□□ -0.42
LINC01393-204ENST00000467677 MDM2Q00987 491 aaPredicted RBP12.45□□□□□ -0.42
LINC01393-204ENST00000467677 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
LINC01393-204ENST00000467677 SLC27A5Q9Y2P5 690 aa12.45□□□□□ -0.42
LINC01393-204ENST00000467677 THAP11Q96EK4 314 aa12.44□□□□□ -0.42
LINC01393-204ENST00000467677 NRG2O14511 850 aaPredicted RBP12.43□□□□□ -0.42
LINC01393-204ENST00000467677 PLA2G2CQ5R387 149 aa12.41□□□□□ -0.42
LINC01393-204ENST00000467677 LIAT1Q6ZQX7 453 aa12.41□□□□□ -0.42
LINC01393-204ENST00000467677 PDZRN3Q9UPQ7 1066 aa12.41□□□□□ -0.42
LINC01393-204ENST00000467677 LCE2BO14633 110 aa12.4□□□□□ -0.42
LINC01393-204ENST00000467677 SPRYD7Q5W111 196 aa12.4□□□□□ -0.42
LINC01393-204ENST00000467677 FMNL1O95466 1100 aaPredicted RBP12.39□□□□□ -0.43
LINC01393-204ENST00000467677 TRIM67Q6ZTA4 783 aa12.39□□□□□ -0.43
LINC01393-204ENST00000467677 FAM160A2Q8N612 972 aaPredicted RBP12.38□□□□□ -0.43
LINC01393-204ENST00000467677 SALL2Q9Y467 1007 aaPredicted RBP12.38□□□□□ -0.43
LINC01393-204ENST00000467677 GRIPAP1Q4V328 841 aa12.37□□□□□ -0.43
LINC01393-204ENST00000467677 BRICD5Q6PL45 260 aa12.37□□□□□ -0.43
LINC01393-204ENST00000467677 RNF19BQ6ZMZ0 732 aa12.37□□□□□ -0.43
LINC01393-204ENST00000467677 GPCPD1Q9NPB8 672 aa12.37□□□□□ -0.43
LINC01393-204ENST00000467677 KDM4AO75164 1064 aa12.36□□□□□ -0.43
LINC01393-204ENST00000467677 ZNF598Q86UK7 904 aaKnown RBP12.36□□□□□ -0.43
LINC01393-204ENST00000467677 PRDM9Q9NQV7 894 aa12.36□□□□□ -0.43
LINC01393-204ENST00000467677 CLCN1P35523 988 aa12.35□□□□□ -0.43
LINC01393-204ENST00000467677 ZNF697Q5TEC3 545 aa12.34□□□□□ -0.43
LINC01393-204ENST00000467677 FAM217BQ9NTX9 383 aaPredicted RBP12.34□□□□□ -0.43
LINC01393-204ENST00000467677 ZMYND10O75800 440 aa12.33□□□□□ -0.44
LINC01393-204ENST00000467677 TRAF7Q6Q0C0 670 aa12.33□□□□□ -0.44
LINC01393-204ENST00000467677 BARGINQ6ZT62 677 aa12.33□□□□□ -0.44
LINC01393-204ENST00000467677 FCF1Q9Y324 198 aaKnown RBP12.33□□□□□ -0.44
LINC01393-204ENST00000467677 ZC3H15Q8WU90 426 aaKnown RBP12.32□□□□□ -0.44
LINC01393-204ENST00000467677 HLA-CQ95604 372 aa12.32□□□□□ -0.44
LINC01393-204ENST00000467677 MSS51Q4VC12 460 aa12.31□□□□□ -0.44
LINC01393-204ENST00000467677 KRI1Q8N9T8 703 aaKnown RBP12.31□□□□□ -0.44
LINC01393-204ENST00000467677 REPIN1Q9BWE0 567 aaKnown RBP12.31□□□□□ -0.44
LINC01393-204ENST00000467677 USP46P62068 366 aa12.3□□□□□ -0.44
LINC01393-204ENST00000467677 HOXA2O43364 376 aa12.29□□□□□ -0.44
LINC01393-204ENST00000467677 PRR20EP86478 221 aa12.29□□□□□ -0.44
LINC01393-204ENST00000467677 PRR20CP86479 221 aa12.29□□□□□ -0.44
LINC01393-204ENST00000467677 PRR20DP86480 221 aa12.29□□□□□ -0.44
LINC01393-204ENST00000467677 PRR20BP86481 221 aa12.29□□□□□ -0.44
LINC01393-204ENST00000467677 PRR20AP86496 221 aa12.29□□□□□ -0.44
LINC01393-204ENST00000467677 Q3C1V9 767 aa12.29□□□□□ -0.44
LINC01393-204ENST00000467677 GDF9O60383 454 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms