RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 MAP2K5Q13163 448 aa9.05□□□□□ -0.96
VPS50-209ENST00000467326 ZC3H15Q8WU90 426 aaKnown RBP9.05□□□□□ -0.96
VPS50-209ENST00000467326 HDGFP51858 240 aaKnown RBP9.04□□□□□ -0.96
VPS50-209ENST00000467326 NECTIN2Q92692 538 aa9.04□□□□□ -0.96
VPS50-209ENST00000467326 EYA1Q99502 592 aa9.04□□□□□ -0.96
VPS50-209ENST00000467326 PRKD2Q9BZL6 878 aa9.04□□□□□ -0.96
VPS50-209ENST00000467326 OATP04181 439 aa9.03□□□□□ -0.96
VPS50-209ENST00000467326 METTL3Q86U44 580 aaKnown RBP9.02□□□□□ -0.97
VPS50-209ENST00000467326 IL21Q9HBE4 155 aa9.02□□□□□ -0.97
VPS50-209ENST00000467326 DNAJB2P25686 324 aa9.01□□□□□ -0.97
VPS50-209ENST00000467326 SAMD7Q7Z3H4 446 aa9.01□□□□□ -0.97
VPS50-209ENST00000467326 PXYLP1Q8TE99 480 aa9.01□□□□□ -0.97
VPS50-209ENST00000467326 ZMYND10O75800 440 aa9□□□□□ -0.97
VPS50-209ENST00000467326 GGCXP38435 758 aa9□□□□□ -0.97
VPS50-209ENST00000467326 CCDC102AQ96A19 550 aa9□□□□□ -0.97
VPS50-209ENST00000467326 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.99□□□□□ -0.97
VPS50-209ENST00000467326 RCCD1A6NED2 376 aa8.99□□□□□ -0.97
VPS50-209ENST00000467326 RNF40O75150 1001 aa8.99□□□□□ -0.97
VPS50-209ENST00000467326 TJAP1Q5JTD0 557 aa8.99□□□□□ -0.97
VPS50-209ENST00000467326 BARGINQ6ZT62 677 aa8.99□□□□□ -0.97
VPS50-209ENST00000467326 MINK1Q8N4C8 1332 aaPredicted RBP8.99□□□□□ -0.97
VPS50-209ENST00000467326 IRF6O14896 467 aa8.98□□□□□ -0.97
VPS50-209ENST00000467326 SWT1Q5T5J6 900 aaKnown RBP8.98□□□□□ -0.97
VPS50-209ENST00000467326 TMEM134Q9H6X4 195 aa8.98□□□□□ -0.97
VPS50-209ENST00000467326 PPP1R18Q6NYC8 613 aa8.97□□□□□ -0.97
VPS50-209ENST00000467326 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.97□□□□□ -0.97
VPS50-209ENST00000467326 SLC4A3P48751 1232 aa8.96□□□□□ -0.98
VPS50-209ENST00000467326 ZNF787Q6DD87 383 aa8.96□□□□□ -0.98
VPS50-209ENST00000467326 KRI1Q8N9T8 703 aaKnown RBP8.96□□□□□ -0.98
VPS50-209ENST00000467326 MTRQ99707 1265 aa8.96□□□□□ -0.98
VPS50-209ENST00000467326 SLF2Q8IX21 1173 aa8.95□□□□□ -0.98
VPS50-209ENST00000467326 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
VPS50-209ENST00000467326 PHOX2BQ99453 314 aa8.94□□□□□ -0.98
VPS50-209ENST00000467326 PDZRN3Q9UPQ7 1066 aa8.94□□□□□ -0.98
VPS50-209ENST00000467326 TMUB1Q9BVT8 246 aa8.92□□□□□ -0.98
VPS50-209ENST00000467326 ZNF775Q96BV0 537 aaPredicted RBP8.91□□□□□ -0.98
VPS50-209ENST00000467326 MDM2Q00987 491 aaPredicted RBP8.89□□□□□ -0.99
VPS50-209ENST00000467326 DAXXQ9UER7 740 aaPredicted RBP8.89□□□□□ -0.99
VPS50-209ENST00000467326 AK7Q96M32 723 aa8.88□□□□□ -0.99
VPS50-209ENST00000467326 PRR14Q9BWN1 585 aa8.88□□□□□ -0.99
VPS50-209ENST00000467326 SLC24A3Q9HC58 644 aa8.88□□□□□ -0.99
VPS50-209ENST00000467326 CLCN1P35523 988 aa8.87□□□□□ -0.99
VPS50-209ENST00000467326 SULF1Q8IWU6 871 aa8.87□□□□□ -0.99
VPS50-209ENST00000467326 CFHP08603 1231 aa8.86□□□□□ -0.99
VPS50-209ENST00000467326 TTLL12Q14166 644 aaPredicted RBP8.86□□□□□ -0.99
VPS50-209ENST00000467326 AMHR2Q16671 573 aa8.86□□□□□ -0.99
VPS50-209ENST00000467326 GPCPD1Q9NPB8 672 aa8.86□□□□□ -0.99
VPS50-209ENST00000467326 DDX11L8A8MPP1 907 aa8.85□□□□□ -0.99
VPS50-209ENST00000467326 TRIM66O15016 1216 aa8.85□□□□□ -0.99
VPS50-209ENST00000467326 SLC10A3P09131 477 aa8.85□□□□□ -0.99
VPS50-209ENST00000467326 APLP1P51693 650 aa8.85□□□□□ -0.99
VPS50-209ENST00000467326 RDH13Q8NBN7 331 aa8.85□□□□□ -0.99
VPS50-209ENST00000467326 RSPH4AQ5TD94 716 aa8.84□□□□□ -0.99
VPS50-209ENST00000467326 ZNF516Q92618 1163 aa8.84□□□□□ -0.99
VPS50-209ENST00000467326 KMT5BQ4FZB7 885 aa8.83□□□□□ -1
VPS50-209ENST00000467326 TPRNQ4KMQ1 711 aa8.83□□□□□ -1
VPS50-209ENST00000467326 PKDCCQ504Y2 493 aa8.82□□□□□ -1
VPS50-209ENST00000467326 PARP9Q8IXQ6 854 aa8.81□□□□□ -1
VPS50-209ENST00000467326 FAM217BQ9NTX9 383 aaPredicted RBP8.81□□□□□ -1
VPS50-209ENST00000467326 DGAT1O75907 488 aa8.8□□□□□ -1
VPS50-209ENST00000467326 GIGYF2Q6Y7W6 1299 aaKnown RBP8.8□□□□□ -1
VPS50-209ENST00000467326 REPIN1Q9BWE0 567 aaKnown RBP8.8□□□□□ -1
VPS50-209ENST00000467326 ACTN4O43707 911 aaKnown RBP8.79□□□□□ -1
VPS50-209ENST00000467326 ZPR1O75312 459 aa8.79□□□□□ -1
VPS50-209ENST00000467326 CD46P15529 392 aa8.79□□□□□ -1
VPS50-209ENST00000467326 COPS2P61201 443 aa8.79□□□□□ -1
VPS50-209ENST00000467326 PDE4DQ08499 809 aa8.79□□□□□ -1
VPS50-209ENST00000467326 SLC19A1P41440 591 aa8.78□□□□□ -1
VPS50-209ENST00000467326 NKX2-3Q8TAU0 364 aa8.78□□□□□ -1
VPS50-209ENST00000467326 PCDHB3Q9Y5E6 796 aa8.78□□□□□ -1
VPS50-209ENST00000467326 GCGRP47871 477 aa8.77□□□□□ -1.01
VPS50-209ENST00000467326 SSTR3P32745 418 aaPredicted RBP8.75□□□□□ -1.01
VPS50-209ENST00000467326 BLOC1S3Q6QNY0 202 aa8.75□□□□□ -1.01
VPS50-209ENST00000467326 PRR20EP86478 221 aa8.74□□□□□ -1.01
VPS50-209ENST00000467326 PRR20CP86479 221 aa8.74□□□□□ -1.01
VPS50-209ENST00000467326 PRR20DP86480 221 aa8.74□□□□□ -1.01
VPS50-209ENST00000467326 PRR20BP86481 221 aa8.74□□□□□ -1.01
VPS50-209ENST00000467326 PRR20AP86496 221 aa8.74□□□□□ -1.01
VPS50-209ENST00000467326 FUT2Q10981 343 aa8.74□□□□□ -1.01
VPS50-209ENST00000467326 ZNF598Q86UK7 904 aaKnown RBP8.74□□□□□ -1.01
VPS50-209ENST00000467326 KDM4AO75164 1064 aa8.72□□□□□ -1.01
VPS50-209ENST00000467326 SPRYD7Q5W111 196 aa8.72□□□□□ -1.01
VPS50-209ENST00000467326 ANKLE1Q8NAG6 615 aa8.72□□□□□ -1.01
VPS50-209ENST00000467326 RNF223E7ERA6 249 aa8.71□□□□□ -1.02
VPS50-209ENST00000467326 NR1I2O75469 434 aa8.71□□□□□ -1.02
VPS50-209ENST00000467326 MS4A1P11836 297 aa8.71□□□□□ -1.02
VPS50-209ENST00000467326 MYT1Q01538 1121 aa8.71□□□□□ -1.02
VPS50-209ENST00000467326 PUS10Q3MIT2 529 aaKnown RBP8.71□□□□□ -1.02
VPS50-209ENST00000467326 ATP6V1AP38606 617 aa8.7□□□□□ -1.02
VPS50-209ENST00000467326 USP46P62068 366 aa8.7□□□□□ -1.02
VPS50-209ENST00000467326 GRIPAP1Q4V328 841 aa8.7□□□□□ -1.02
VPS50-209ENST00000467326 NUTM1Q86Y26 1132 aa8.7□□□□□ -1.02
VPS50-209ENST00000467326 TLL1O43897 1013 aa8.69□□□□□ -1.02
VPS50-209ENST00000467326 BEGAINQ9BUH8 593 aa8.69□□□□□ -1.02
VPS50-209ENST00000467326 HOXA2O43364 376 aa8.68□□□□□ -1.02
VPS50-209ENST00000467326 PRKCSHP14314 528 aaPredicted RBP8.68□□□□□ -1.02
VPS50-209ENST00000467326 MORN1Q5T089 497 aa8.68□□□□□ -1.02
VPS50-209ENST00000467326 TRIM67Q6ZTA4 783 aa8.68□□□□□ -1.02
VPS50-209ENST00000467326 KDM4CQ9H3R0 1056 aa8.68□□□□□ -1.02
VPS50-209ENST00000467326 GPBP1L1Q9HC44 474 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms